data_5WK7 # _model_server_result.job_id DGXd4Bolk-uNWul31caL0w _model_server_result.datetime_utc '2024-12-05 04:40:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wk7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 5WK7 # _exptl.entry_id 5WK7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.97 _cell.angle_gamma 90 _cell.entry_id 5WK7 _cell.length_a 56.82 _cell.length_b 58.42 _cell.length_c 57.25 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WK7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 85 A GLU 84 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc2 A O GLY 94 A GLY 93 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc3 A O GLU 95 A GLU 94 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? metalc ? metalc4 A O TYR 97 A TYR 96 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc5 A SG CYS 358 A CYS 357 1_555 B FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc6 D K K . A K 503 1_555 E O HOH . A HOH 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.967 ? metalc ? metalc7 D K K . A K 503 1_555 E O HOH . A HOH 781 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5WK7 _atom_sites.fract_transf_matrix[1][1] 0.017599 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004706 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018081 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 417 HEM HEM . C 3 CAH A 1 502 423 CAH CAH . D 4 K A 1 503 1 K K . E 5 HOH A 1 601 211 HOH HOH . E 5 HOH A 2 602 134 HOH HOH . E 5 HOH A 3 603 195 HOH HOH . E 5 HOH A 4 604 197 HOH HOH . E 5 HOH A 5 605 69 HOH HOH . E 5 HOH A 6 606 131 HOH HOH . E 5 HOH A 7 607 46 HOH HOH . E 5 HOH A 8 608 43 HOH HOH . E 5 HOH A 9 609 164 HOH HOH . E 5 HOH A 10 610 70 HOH HOH . E 5 HOH A 11 611 189 HOH HOH . E 5 HOH A 12 612 32 HOH HOH . E 5 HOH A 13 613 5 HOH HOH . E 5 HOH A 14 614 166 HOH HOH . E 5 HOH A 15 615 120 HOH HOH . E 5 HOH A 16 616 206 HOH HOH . E 5 HOH A 17 617 21 HOH HOH . E 5 HOH A 18 618 40 HOH HOH . E 5 HOH A 19 619 53 HOH HOH . E 5 HOH A 20 620 151 HOH HOH . E 5 HOH A 21 621 145 HOH HOH . E 5 HOH A 22 622 35 HOH HOH . E 5 HOH A 23 623 112 HOH HOH . E 5 HOH A 24 624 105 HOH HOH . E 5 HOH A 25 625 138 HOH HOH . E 5 HOH A 26 626 141 HOH HOH . E 5 HOH A 27 627 210 HOH HOH . E 5 HOH A 28 628 15 HOH HOH . E 5 HOH A 29 629 191 HOH HOH . E 5 HOH A 30 630 199 HOH HOH . E 5 HOH A 31 631 4 HOH HOH . E 5 HOH A 32 632 13 HOH HOH . E 5 HOH A 33 633 55 HOH HOH . E 5 HOH A 34 634 42 HOH HOH . E 5 HOH A 35 635 10 HOH HOH . E 5 HOH A 36 636 8 HOH HOH . E 5 HOH A 37 637 137 HOH HOH . E 5 HOH A 38 638 73 HOH HOH . E 5 HOH A 39 639 78 HOH HOH . E 5 HOH A 40 640 128 HOH HOH . E 5 HOH A 41 641 144 HOH HOH . E 5 HOH A 42 642 17 HOH HOH . E 5 HOH A 43 643 23 HOH HOH . E 5 HOH A 44 644 97 HOH HOH . E 5 HOH A 45 645 170 HOH HOH . E 5 HOH A 46 646 117 HOH HOH . E 5 HOH A 47 647 24 HOH HOH . E 5 HOH A 48 648 62 HOH HOH . E 5 HOH A 49 649 41 HOH HOH . E 5 HOH A 50 650 96 HOH HOH . E 5 HOH A 51 651 64 HOH HOH . E 5 HOH A 52 652 66 HOH HOH . E 5 HOH A 53 653 59 HOH HOH . E 5 HOH A 54 654 14 HOH HOH . E 5 HOH A 55 655 25 HOH HOH . E 5 HOH A 56 656 126 HOH HOH . E 5 HOH A 57 657 54 HOH HOH . E 5 HOH A 58 658 26 HOH HOH . E 5 HOH A 59 659 84 HOH HOH . E 5 HOH A 60 660 27 HOH HOH . E 5 HOH A 61 661 149 HOH HOH . E 5 HOH A 62 662 33 HOH HOH . E 5 HOH A 63 663 51 HOH HOH . E 5 HOH A 64 664 94 HOH HOH . E 5 HOH A 65 665 3 HOH HOH . E 5 HOH A 66 666 72 HOH HOH . E 5 HOH A 67 667 11 HOH HOH . E 5 HOH A 68 668 2 HOH HOH . E 5 HOH A 69 669 12 HOH HOH . E 5 HOH A 70 670 36 HOH HOH . E 5 HOH A 71 671 100 HOH HOH . E 5 HOH A 72 672 125 HOH HOH . E 5 HOH A 73 673 52 HOH HOH . E 5 HOH A 74 674 45 HOH HOH . E 5 HOH A 75 675 47 HOH HOH . E 5 HOH A 76 676 133 HOH HOH . E 5 HOH A 77 677 38 HOH HOH . E 5 HOH A 78 678 123 HOH HOH . E 5 HOH A 79 679 135 HOH HOH . E 5 HOH A 80 680 20 HOH HOH . E 5 HOH A 81 681 158 HOH HOH . E 5 HOH A 82 682 207 HOH HOH . E 5 HOH A 83 683 152 HOH HOH . E 5 HOH A 84 684 60 HOH HOH . E 5 HOH A 85 685 7 HOH HOH . E 5 HOH A 86 686 39 HOH HOH . E 5 HOH A 87 687 65 HOH HOH . E 5 HOH A 88 688 203 HOH HOH . E 5 HOH A 89 689 173 HOH HOH . E 5 HOH A 90 690 102 HOH HOH . E 5 HOH A 91 691 175 HOH HOH . E 5 HOH A 92 692 106 HOH HOH . E 5 HOH A 93 693 56 HOH HOH . E 5 HOH A 94 694 99 HOH HOH . E 5 HOH A 95 695 81 HOH HOH . E 5 HOH A 96 696 82 HOH HOH . E 5 HOH A 97 697 178 HOH HOH . E 5 HOH A 98 698 92 HOH HOH . E 5 HOH A 99 699 9 HOH HOH . E 5 HOH A 100 700 48 HOH HOH . E 5 HOH A 101 701 68 HOH HOH . E 5 HOH A 102 702 109 HOH HOH . E 5 HOH A 103 703 140 HOH HOH . E 5 HOH A 104 704 118 HOH HOH . E 5 HOH A 105 705 31 HOH HOH . E 5 HOH A 106 706 147 HOH HOH . E 5 HOH A 107 707 188 HOH HOH . E 5 HOH A 108 708 204 HOH HOH . E 5 HOH A 109 709 95 HOH HOH . E 5 HOH A 110 710 30 HOH HOH . E 5 HOH A 111 711 167 HOH HOH . E 5 HOH A 112 712 83 HOH HOH . E 5 HOH A 113 713 61 HOH HOH . E 5 HOH A 114 714 101 HOH HOH . E 5 HOH A 115 715 19 HOH HOH . E 5 HOH A 116 716 63 HOH HOH . E 5 HOH A 117 717 181 HOH HOH . E 5 HOH A 118 718 76 HOH HOH . E 5 HOH A 119 719 44 HOH HOH . E 5 HOH A 120 720 91 HOH HOH . E 5 HOH A 121 721 183 HOH HOH . E 5 HOH A 122 722 98 HOH HOH . E 5 HOH A 123 723 34 HOH HOH . E 5 HOH A 124 724 71 HOH HOH . E 5 HOH A 125 725 85 HOH HOH . E 5 HOH A 126 726 6 HOH HOH . E 5 HOH A 127 727 80 HOH HOH . E 5 HOH A 128 728 22 HOH HOH . E 5 HOH A 129 729 29 HOH HOH . E 5 HOH A 130 730 146 HOH HOH . E 5 HOH A 131 731 209 HOH HOH . E 5 HOH A 132 732 16 HOH HOH . E 5 HOH A 133 733 139 HOH HOH . E 5 HOH A 134 734 28 HOH HOH . E 5 HOH A 135 735 119 HOH HOH . E 5 HOH A 136 736 37 HOH HOH . E 5 HOH A 137 737 107 HOH HOH . E 5 HOH A 138 738 124 HOH HOH . E 5 HOH A 139 739 130 HOH HOH . E 5 HOH A 140 740 196 HOH HOH . E 5 HOH A 141 741 142 HOH HOH . E 5 HOH A 142 742 108 HOH HOH . E 5 HOH A 143 743 90 HOH HOH . E 5 HOH A 144 744 143 HOH HOH . E 5 HOH A 145 745 18 HOH HOH . E 5 HOH A 146 746 74 HOH HOH . E 5 HOH A 147 747 111 HOH HOH . E 5 HOH A 148 748 67 HOH HOH . E 5 HOH A 149 749 208 HOH HOH . E 5 HOH A 150 750 89 HOH HOH . E 5 HOH A 151 751 129 HOH HOH . E 5 HOH A 152 752 87 HOH HOH . E 5 HOH A 153 753 49 HOH HOH . E 5 HOH A 154 754 110 HOH HOH . E 5 HOH A 155 755 86 HOH HOH . E 5 HOH A 156 756 136 HOH HOH . E 5 HOH A 157 757 165 HOH HOH . E 5 HOH A 158 758 150 HOH HOH . E 5 HOH A 159 759 79 HOH HOH . E 5 HOH A 160 760 184 HOH HOH . E 5 HOH A 161 761 168 HOH HOH . E 5 HOH A 162 762 103 HOH HOH . E 5 HOH A 163 763 154 HOH HOH . E 5 HOH A 164 764 116 HOH HOH . E 5 HOH A 165 765 163 HOH HOH . E 5 HOH A 166 766 201 HOH HOH . E 5 HOH A 167 767 88 HOH HOH . E 5 HOH A 168 768 205 HOH HOH . E 5 HOH A 169 769 121 HOH HOH . E 5 HOH A 170 770 114 HOH HOH . E 5 HOH A 171 771 75 HOH HOH . E 5 HOH A 172 772 187 HOH HOH . E 5 HOH A 173 773 172 HOH HOH . E 5 HOH A 174 774 186 HOH HOH . E 5 HOH A 175 775 127 HOH HOH . E 5 HOH A 176 776 174 HOH HOH . E 5 HOH A 177 777 77 HOH HOH . E 5 HOH A 178 778 182 HOH HOH . E 5 HOH A 179 779 190 HOH HOH . E 5 HOH A 180 780 57 HOH HOH . E 5 HOH A 181 781 122 HOH HOH . E 5 HOH A 182 782 50 HOH HOH . E 5 HOH A 183 783 193 HOH HOH . E 5 HOH A 184 784 160 HOH HOH . E 5 HOH A 185 785 180 HOH HOH . E 5 HOH A 186 786 104 HOH HOH . E 5 HOH A 187 787 157 HOH HOH . E 5 HOH A 188 788 156 HOH HOH . E 5 HOH A 189 789 185 HOH HOH . E 5 HOH A 190 790 202 HOH HOH . E 5 HOH A 191 791 159 HOH HOH . E 5 HOH A 192 792 161 HOH HOH . E 5 HOH A 193 793 148 HOH HOH . E 5 HOH A 194 794 176 HOH HOH . E 5 HOH A 195 795 132 HOH HOH . E 5 HOH A 196 796 171 HOH HOH . E 5 HOH A 197 797 200 HOH HOH . E 5 HOH A 198 798 192 HOH HOH . E 5 HOH A 199 799 162 HOH HOH . E 5 HOH A 200 800 198 HOH HOH . E 5 HOH A 201 801 179 HOH HOH . E 5 HOH A 202 802 169 HOH HOH . E 5 HOH A 203 803 113 HOH HOH . E 5 HOH A 204 804 194 HOH HOH . E 5 HOH A 205 805 155 HOH HOH . E 5 HOH A 206 806 93 HOH HOH . E 5 HOH A 207 807 58 HOH HOH . E 5 HOH A 208 808 177 HOH HOH . E 5 HOH A 209 809 115 HOH HOH . E 5 HOH A 210 810 153 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 49.554 _atom_site.Cartn_y -6.202 _atom_site.Cartn_z 12.97 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.94 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #