data_5WKK # _model_server_result.job_id 05T1xhHOJ0sQpUbt3kdEAg _model_server_result.datetime_utc '2024-11-24 10:51:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wkk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5WKK # _exptl.entry_id 5WKK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.2 _cell.angle_gamma 90 _cell.entry_id 5WKK _cell.length_a 101.584 _cell.length_b 57.999 _cell.length_c 49.731 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WKK _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -18.7904 0 46.04447 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 155 A CYS 148 1_555 D C08 AW4 . A AW4 403 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.801 ? covale ? covale2 A SG CYS 155 A CYS 148 1_555 E C08 B3G . A B3G 404 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.803 ? metalc ? metalc1 C MG MG . A MG 402 1_555 F O HOH . A HOH 540 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc2 C MG MG . A MG 402 1_555 F O HOH . A HOH 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc3 C MG MG . A MG 402 1_555 F O HOH . A HOH 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc4 C MG MG . A MG 402 1_555 F O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc5 C MG MG . A MG 402 1_555 F O HOH . A HOH 652 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc6 C MG MG . A MG 402 1_555 F O HOH . A HOH 722 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5WKK _atom_sites.fract_transf_matrix[1][1] 0.009844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004017 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG4 A 1 401 1 PG4 P6G . C 3 MG A 1 402 1 MG MG . D 4 AW4 A 1 403 1 AW4 A19 . E 5 B3G A 1 404 1 B3G A19 . F 6 HOH A 1 501 220 HOH HOH . F 6 HOH A 2 502 264 HOH HOH . F 6 HOH A 3 503 198 HOH HOH . F 6 HOH A 4 504 170 HOH HOH . F 6 HOH A 5 505 270 HOH HOH . F 6 HOH A 6 506 186 HOH HOH . F 6 HOH A 7 507 76 HOH HOH . F 6 HOH A 8 508 132 HOH HOH . F 6 HOH A 9 509 89 HOH HOH . F 6 HOH A 10 510 102 HOH HOH . F 6 HOH A 11 511 68 HOH HOH . F 6 HOH A 12 512 231 HOH HOH . F 6 HOH A 13 513 158 HOH HOH . F 6 HOH A 14 514 115 HOH HOH . F 6 HOH A 15 515 47 HOH HOH . F 6 HOH A 16 516 87 HOH HOH . F 6 HOH A 17 517 152 HOH HOH . F 6 HOH A 18 518 218 HOH HOH . F 6 HOH A 19 519 140 HOH HOH . F 6 HOH A 20 520 93 HOH HOH . F 6 HOH A 21 521 134 HOH HOH . F 6 HOH A 22 522 184 HOH HOH . F 6 HOH A 23 523 129 HOH HOH . F 6 HOH A 24 524 148 HOH HOH . F 6 HOH A 25 525 164 HOH HOH . F 6 HOH A 26 526 74 HOH HOH . F 6 HOH A 27 527 38 HOH HOH . F 6 HOH A 28 528 174 HOH HOH . F 6 HOH A 29 529 33 HOH HOH . F 6 HOH A 30 530 67 HOH HOH . F 6 HOH A 31 531 82 HOH HOH . F 6 HOH A 32 532 1 HOH HOH . F 6 HOH A 33 533 24 HOH HOH . F 6 HOH A 34 534 69 HOH HOH . F 6 HOH A 35 535 254 HOH HOH . F 6 HOH A 36 536 22 HOH HOH . F 6 HOH A 37 537 39 HOH HOH . F 6 HOH A 38 538 141 HOH HOH . F 6 HOH A 39 539 172 HOH HOH . F 6 HOH A 40 540 41 HOH HOH . F 6 HOH A 41 541 49 HOH HOH . F 6 HOH A 42 542 88 HOH HOH . F 6 HOH A 43 543 43 HOH HOH . F 6 HOH A 44 544 77 HOH HOH . F 6 HOH A 45 545 23 HOH HOH . F 6 HOH A 46 546 95 HOH HOH . F 6 HOH A 47 547 46 HOH HOH . F 6 HOH A 48 548 98 HOH HOH . F 6 HOH A 49 549 73 HOH HOH . F 6 HOH A 50 550 28 HOH HOH . F 6 HOH A 51 551 19 HOH HOH . F 6 HOH A 52 552 168 HOH HOH . F 6 HOH A 53 553 113 HOH HOH . F 6 HOH A 54 554 80 HOH HOH . F 6 HOH A 55 555 252 HOH HOH . F 6 HOH A 56 556 26 HOH HOH . F 6 HOH A 57 557 84 HOH HOH . F 6 HOH A 58 558 119 HOH HOH . F 6 HOH A 59 559 60 HOH HOH . F 6 HOH A 60 560 125 HOH HOH . F 6 HOH A 61 561 159 HOH HOH . F 6 HOH A 62 562 167 HOH HOH . F 6 HOH A 63 563 107 HOH HOH . F 6 HOH A 64 564 16 HOH HOH . F 6 HOH A 65 565 2 HOH HOH . F 6 HOH A 66 566 247 HOH HOH . F 6 HOH A 67 567 29 HOH HOH . F 6 HOH A 68 568 165 HOH HOH . F 6 HOH A 69 569 8 HOH HOH . F 6 HOH A 70 570 151 HOH HOH . F 6 HOH A 71 571 145 HOH HOH . F 6 HOH A 72 572 175 HOH HOH . F 6 HOH A 73 573 245 HOH HOH . F 6 HOH A 74 574 9 HOH HOH . F 6 HOH A 75 575 149 HOH HOH . F 6 HOH A 76 576 193 HOH HOH . F 6 HOH A 77 577 21 HOH HOH . F 6 HOH A 78 578 261 HOH HOH . F 6 HOH A 79 579 143 HOH HOH . F 6 HOH A 80 580 57 HOH HOH . F 6 HOH A 81 581 18 HOH HOH . F 6 HOH A 82 582 14 HOH HOH . F 6 HOH A 83 583 123 HOH HOH . F 6 HOH A 84 584 81 HOH HOH . F 6 HOH A 85 585 128 HOH HOH . F 6 HOH A 86 586 86 HOH HOH . F 6 HOH A 87 587 180 HOH HOH . F 6 HOH A 88 588 157 HOH HOH . F 6 HOH A 89 589 182 HOH HOH . F 6 HOH A 90 590 15 HOH HOH . F 6 HOH A 91 591 30 HOH HOH . F 6 HOH A 92 592 177 HOH HOH . F 6 HOH A 93 593 92 HOH HOH . F 6 HOH A 94 594 10 HOH HOH . F 6 HOH A 95 595 114 HOH HOH . F 6 HOH A 96 596 61 HOH HOH . F 6 HOH A 97 597 32 HOH HOH . F 6 HOH A 98 598 166 HOH HOH . F 6 HOH A 99 599 25 HOH HOH . F 6 HOH A 100 600 199 HOH HOH . F 6 HOH A 101 601 136 HOH HOH . F 6 HOH A 102 602 37 HOH HOH . F 6 HOH A 103 603 187 HOH HOH . F 6 HOH A 104 604 85 HOH HOH . F 6 HOH A 105 605 4 HOH HOH . F 6 HOH A 106 606 239 HOH HOH . F 6 HOH A 107 607 11 HOH HOH . F 6 HOH A 108 608 5 HOH HOH . F 6 HOH A 109 609 237 HOH HOH . F 6 HOH A 110 610 13 HOH HOH . F 6 HOH A 111 611 66 HOH HOH . F 6 HOH A 112 612 181 HOH HOH . F 6 HOH A 113 613 251 HOH HOH . F 6 HOH A 114 614 27 HOH HOH . F 6 HOH A 115 615 79 HOH HOH . F 6 HOH A 116 616 112 HOH HOH . F 6 HOH A 117 617 178 HOH HOH . F 6 HOH A 118 618 6 HOH HOH . F 6 HOH A 119 619 269 HOH HOH . F 6 HOH A 120 620 154 HOH HOH . F 6 HOH A 121 621 108 HOH HOH . F 6 HOH A 122 622 147 HOH HOH . F 6 HOH A 123 623 7 HOH HOH . F 6 HOH A 124 624 71 HOH HOH . F 6 HOH A 125 625 227 HOH HOH . F 6 HOH A 126 626 195 HOH HOH . F 6 HOH A 127 627 91 HOH HOH . F 6 HOH A 128 628 230 HOH HOH . F 6 HOH A 129 629 63 HOH HOH . F 6 HOH A 130 630 171 HOH HOH . F 6 HOH A 131 631 36 HOH HOH . F 6 HOH A 132 632 34 HOH HOH . F 6 HOH A 133 633 189 HOH HOH . F 6 HOH A 134 634 146 HOH HOH . F 6 HOH A 135 635 103 HOH HOH . F 6 HOH A 136 636 162 HOH HOH . F 6 HOH A 137 637 226 HOH HOH . F 6 HOH A 138 638 179 HOH HOH . F 6 HOH A 139 639 190 HOH HOH . F 6 HOH A 140 640 72 HOH HOH . F 6 HOH A 141 641 243 HOH HOH . F 6 HOH A 142 642 59 HOH HOH . F 6 HOH A 143 643 138 HOH HOH . F 6 HOH A 144 644 54 HOH HOH . F 6 HOH A 145 645 50 HOH HOH . F 6 HOH A 146 646 161 HOH HOH . F 6 HOH A 147 647 127 HOH HOH . F 6 HOH A 148 648 233 HOH HOH . F 6 HOH A 149 649 100 HOH HOH . F 6 HOH A 150 650 53 HOH HOH . F 6 HOH A 151 651 139 HOH HOH . F 6 HOH A 152 652 99 HOH HOH . F 6 HOH A 153 653 111 HOH HOH . F 6 HOH A 154 654 232 HOH HOH . F 6 HOH A 155 655 31 HOH HOH . F 6 HOH A 156 656 58 HOH HOH . F 6 HOH A 157 657 228 HOH HOH . F 6 HOH A 158 658 17 HOH HOH . F 6 HOH A 159 659 42 HOH HOH . F 6 HOH A 160 660 192 HOH HOH . F 6 HOH A 161 661 56 HOH HOH . F 6 HOH A 162 662 124 HOH HOH . F 6 HOH A 163 663 135 HOH HOH . F 6 HOH A 164 664 75 HOH HOH . F 6 HOH A 165 665 173 HOH HOH . F 6 HOH A 166 666 44 HOH HOH . F 6 HOH A 167 667 109 HOH HOH . F 6 HOH A 168 668 52 HOH HOH . F 6 HOH A 169 669 163 HOH HOH . F 6 HOH A 170 670 117 HOH HOH . F 6 HOH A 171 671 12 HOH HOH . F 6 HOH A 172 672 40 HOH HOH . F 6 HOH A 173 673 62 HOH HOH . F 6 HOH A 174 674 257 HOH HOH . F 6 HOH A 175 675 155 HOH HOH . F 6 HOH A 176 676 223 HOH HOH . F 6 HOH A 177 677 229 HOH HOH . F 6 HOH A 178 678 131 HOH HOH . F 6 HOH A 179 679 51 HOH HOH . F 6 HOH A 180 680 94 HOH HOH . F 6 HOH A 181 681 206 HOH HOH . F 6 HOH A 182 682 150 HOH HOH . F 6 HOH A 183 683 20 HOH HOH . F 6 HOH A 184 684 183 HOH HOH . F 6 HOH A 185 685 120 HOH HOH . F 6 HOH A 186 686 249 HOH HOH . F 6 HOH A 187 687 104 HOH HOH . F 6 HOH A 188 688 45 HOH HOH . F 6 HOH A 189 689 197 HOH HOH . F 6 HOH A 190 690 215 HOH HOH . F 6 HOH A 191 691 3 HOH HOH . F 6 HOH A 192 692 97 HOH HOH . F 6 HOH A 193 693 121 HOH HOH . F 6 HOH A 194 694 110 HOH HOH . F 6 HOH A 195 695 236 HOH HOH . F 6 HOH A 196 696 137 HOH HOH . F 6 HOH A 197 697 65 HOH HOH . F 6 HOH A 198 698 266 HOH HOH . F 6 HOH A 199 699 70 HOH HOH . F 6 HOH A 200 700 253 HOH HOH . F 6 HOH A 201 701 216 HOH HOH . F 6 HOH A 202 702 160 HOH HOH . F 6 HOH A 203 703 241 HOH HOH . F 6 HOH A 204 704 262 HOH HOH . F 6 HOH A 205 705 48 HOH HOH . F 6 HOH A 206 706 83 HOH HOH . F 6 HOH A 207 707 105 HOH HOH . F 6 HOH A 208 708 219 HOH HOH . F 6 HOH A 209 709 122 HOH HOH . F 6 HOH A 210 710 126 HOH HOH . F 6 HOH A 211 711 191 HOH HOH . F 6 HOH A 212 712 200 HOH HOH . F 6 HOH A 213 713 213 HOH HOH . F 6 HOH A 214 714 250 HOH HOH . F 6 HOH A 215 715 271 HOH HOH . F 6 HOH A 216 716 235 HOH HOH . F 6 HOH A 217 717 90 HOH HOH . F 6 HOH A 218 718 118 HOH HOH . F 6 HOH A 219 719 272 HOH HOH . F 6 HOH A 220 720 64 HOH HOH . F 6 HOH A 221 721 156 HOH HOH . F 6 HOH A 222 722 205 HOH HOH . F 6 HOH A 223 723 221 HOH HOH . F 6 HOH A 224 724 188 HOH HOH . F 6 HOH A 225 725 263 HOH HOH . F 6 HOH A 226 726 225 HOH HOH . F 6 HOH A 227 727 268 HOH HOH . F 6 HOH A 228 728 222 HOH HOH . F 6 HOH A 229 729 203 HOH HOH . F 6 HOH A 230 730 256 HOH HOH . F 6 HOH A 231 731 255 HOH HOH . F 6 HOH A 232 732 217 HOH HOH . F 6 HOH A 233 733 130 HOH HOH . F 6 HOH A 234 734 258 HOH HOH . F 6 HOH A 235 735 224 HOH HOH . F 6 HOH A 236 736 260 HOH HOH . F 6 HOH A 237 737 202 HOH HOH . F 6 HOH A 238 738 207 HOH HOH . F 6 HOH A 239 739 142 HOH HOH . F 6 HOH A 240 740 240 HOH HOH . F 6 HOH A 241 741 196 HOH HOH . F 6 HOH A 242 742 185 HOH HOH . F 6 HOH A 243 743 144 HOH HOH . F 6 HOH A 244 744 267 HOH HOH . F 6 HOH A 245 745 209 HOH HOH . F 6 HOH A 246 746 78 HOH HOH . F 6 HOH A 247 747 248 HOH HOH . F 6 HOH A 248 748 116 HOH HOH . F 6 HOH A 249 749 208 HOH HOH . F 6 HOH A 250 750 101 HOH HOH . F 6 HOH A 251 751 259 HOH HOH . F 6 HOH A 252 752 133 HOH HOH . F 6 HOH A 253 753 246 HOH HOH . F 6 HOH A 254 754 55 HOH HOH . F 6 HOH A 255 755 234 HOH HOH . F 6 HOH A 256 756 238 HOH HOH . F 6 HOH A 257 757 212 HOH HOH . F 6 HOH A 258 758 176 HOH HOH . F 6 HOH A 259 759 106 HOH HOH . F 6 HOH A 260 760 265 HOH HOH . F 6 HOH A 261 761 244 HOH HOH . F 6 HOH A 262 762 214 HOH HOH . F 6 HOH A 263 763 204 HOH HOH . F 6 HOH A 264 764 194 HOH HOH . F 6 HOH A 265 765 35 HOH HOH . F 6 HOH A 266 766 201 HOH HOH . F 6 HOH A 267 767 96 HOH HOH . F 6 HOH A 268 768 153 HOH HOH . F 6 HOH A 269 769 211 HOH HOH . F 6 HOH A 270 770 210 HOH HOH . F 6 HOH A 271 771 242 HOH HOH . F 6 HOH A 272 772 169 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -21.507 _atom_site.Cartn_y 17.432 _atom_site.Cartn_z 11.879 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #