data_5WLM
#
_model_server_result.job_id            c9PIx16F-gor88lRoqYEgQ 
_model_server_result.datetime_utc      '2024-10-28 02:24:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wlm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    5WLM 
#
_exptl.entry_id    5WLM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5WLM 
_cell.length_a            81.156 
_cell.length_b            81.156 
_cell.length_c            66.331 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5WLM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,J,K 1 1,2 
C,D,H,I,L,M 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ACE 1 A ACE 0 1_555 A N ILE 2 A ILE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 A C LEU 27 A LEU 26 1_555 A N NH2 28 A NH2 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? 
covale ? covale3 B C ACE 1 B ACE 0 1_555 B N ILE 2 B ILE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale4 B C LEU 27 B LEU 26 1_555 B N NH2 28 B NH2 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale5 C C ACE 1 C ACE 0 1_555 C N ILE 2 C ILE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale6 C C LEU 27 C LEU 26 1_555 C N NH2 28 C NH2 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale7 D C ACE 1 D ACE 0 1_555 D N ILE 2 D ILE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale8 D C LEU 27 D LEU 26 1_555 D N NH2 28 D NH2 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
metalc ? metalc1 A OD1 ASP 13 A ASP 12 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? 
metalc ? metalc2 A OD2 ASP 13 A ASP 12 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc3 A ND1 HIS 16 A HIS 15 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc4 A OD2 ASP 22 A ASP 21 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc5 E ZN ZN . A ZN 201 1_555 B OD2 ASP 13 B ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
metalc ? metalc6 E ZN ZN . A ZN 201 1_555 K O HOH . B HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc7 E ZN ZN . A ZN 201 1_555 K O HOH . B HOH 304 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc8 F ZN ZN . A ZN 202 1_555 J O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc9 F ZN ZN . A ZN 202 5_554 B OD1 ASP 22 B ASP 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? 
metalc ? metalc10 F ZN ZN . A ZN 202 1_555 K O HOH . B HOH 303 5_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? 
metalc ? metalc11 J O HOH . A HOH 307 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc12 J O HOH . A HOH 307 4_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc13 B ND1 HIS 16 B HIS 15 1_555 G ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc14 C OD2 ASP 13 C ASP 12 1_555 I ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc15 C ND1 HIS 16 C HIS 15 1_555 H ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc16 H ZN ZN . C ZN 201 1_555 D OD2 ASP 13 D ASP 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? 
metalc ? metalc17 H ZN ZN . C ZN 201 1_555 M O HOH . D HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc18 H ZN ZN . C ZN 201 1_555 M O HOH . D HOH 304 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc19 L O HOH . C HOH 303 1_555 I ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc20 L O HOH . C HOH 303 4_555 I ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc21 D ND1 HIS 16 D HIS 15 1_555 I ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5WLM 
_atom_sites.fract_transf_matrix[1][1]    0.012322 
_atom_sites.fract_transf_matrix[1][2]    0.007114 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014228 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015076 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN A 1 201 102 ZN ZN . 
F 2 ZN A 1 202 103 ZN ZN . 
G 2 ZN B 1 201 101 ZN ZN . 
H 2 ZN C 1 201 102 ZN ZN . 
I 2 ZN D 1 201 101 ZN ZN . 
J 3 HOH A 1 301 15 HOH HOH . 
J 3 HOH A 2 302 7 HOH HOH . 
J 3 HOH A 3 303 12 HOH HOH . 
J 3 HOH A 4 304 11 HOH HOH . 
J 3 HOH A 5 305 5 HOH HOH . 
J 3 HOH A 6 306 13 HOH HOH . 
J 3 HOH A 7 307 1 HOH HOH . 
J 3 HOH A 8 308 8 HOH HOH . 
J 3 HOH A 9 309 20 HOH HOH . 
K 3 HOH B 1 301 6 HOH HOH . 
K 3 HOH B 2 302 17 HOH HOH . 
K 3 HOH B 3 303 18 HOH HOH . 
K 3 HOH B 4 304 2 HOH HOH . 
L 3 HOH C 1 301 16 HOH HOH . 
L 3 HOH C 2 302 10 HOH HOH . 
L 3 HOH C 3 303 3 HOH HOH . 
M 3 HOH D 1 301 9 HOH HOH . 
M 3 HOH D 2 302 19 HOH HOH . 
M 3 HOH D 3 303 14 HOH HOH . 
M 3 HOH D 4 304 4 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -0.875 
_atom_site.Cartn_y               -3.309 
_atom_site.Cartn_z               -1.313 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        33.03 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           224 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#