data_5WMT # _model_server_result.job_id CqE2dF6WPCEVqZJZf-KbfA _model_server_result.datetime_utc '2024-10-20 03:46:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wmt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":405}' # _entry.id 5WMT # _exptl.entry_id 5WMT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.829 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl 2-[2-(1-benzyl-1H-imidazol-2-yl)ethyl]-3-chloro-4,6-dihydroxybenzoate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WMT _cell.length_a 94.412 _cell.length_b 94.73 _cell.length_c 179.25 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WMT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 PISA tetrameric 4 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,Z 1 1 B,J,K,L,M,N,AA 2 1 C,O,P,Q,R,S,T,BA 3 1 D,U,V,W,X,Y,CA 4 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 N N N ? 3 T N N ? 3 Y N N # _chem_comp.formula 'C20 H19 Cl N2 O4' _chem_comp.formula_weight 386.829 _chem_comp.id 9QY _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl 2-[2-(1-benzyl-1H-imidazol-2-yl)ethyl]-3-chloro-4,6-dihydroxybenzoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'resorcinylic inhibitor BnIm' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAC CAU 9QY sing 1 n n CL CAW 9QY sing 2 n n CAU CAM 9QY doub 3 n y CAU CAW 9QY sing 4 n y CAM CAV 9QY sing 5 n y CAW CAY 9QY doub 6 n y CAK CAH 9QY doub 7 n y CAK CAT 9QY sing 8 n y CAH CAF 9QY sing 9 n y CAP CAT 9QY sing 10 n n CAP NBA 9QY sing 11 n n CAV OAD 9QY sing 12 n n CAV CAZ 9QY doub 13 n y CAY CAZ 9QY sing 14 n y CAY CAO 9QY sing 15 n n CAT CAJ 9QY doub 16 n y CAN CAO 9QY sing 17 n n CAN CAX 9QY sing 18 n n NBA CAX 9QY sing 19 n y NBA CAL 9QY sing 20 n y CAZ CAS 9QY sing 21 n n CAF CAG 9QY doub 22 n y CAX NAQ 9QY doub 23 n y CAL CAI 9QY doub 24 n y CAJ CAG 9QY sing 25 n y NAQ CAI 9QY sing 26 n y CAS OAR 9QY sing 27 n n CAS OAB 9QY doub 28 n n OAR CAA 9QY sing 29 n n CAA HAB 9QY sing 30 n n CAA HAA 9QY sing 31 n n CAA HAC 9QY sing 32 n n CAF HAF 9QY sing 33 n n CAG HAG 9QY sing 34 n n CAH HAH 9QY sing 35 n n CAI HAI 9QY sing 36 n n CAJ HAJ 9QY sing 37 n n CAK HAK 9QY sing 38 n n CAL HAL 9QY sing 39 n n CAM HAM 9QY sing 40 n n CAN HAO 9QY sing 41 n n CAN HAN 9QY sing 42 n n CAO HAQ 9QY sing 43 n n CAO HAP 9QY sing 44 n n CAP HAR 9QY sing 45 n n CAP HAS 9QY sing 46 n n OAC HAT 9QY sing 47 n n OAD HAD 9QY sing 48 n n # _atom_sites.entry_id 5WMT _atom_sites.fract_transf_matrix[1][1] 0.010592 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010556 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005579 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EDO A 1 401 4 EDO EDO . F 2 EDO A 1 402 6 EDO EDO . G 2 EDO A 1 403 7 EDO EDO . H 2 EDO A 1 404 14 EDO EDO . I 3 9QY A 1 405 1 9QY DRG . J 2 EDO B 1 401 2 EDO EDO . K 2 EDO B 1 402 5 EDO EDO . L 2 EDO B 1 403 18 EDO EDO . M 4 MG B 1 404 5 MG MG . N 3 9QY B 1 405 2 9QY DRG . O 2 EDO C 1 401 1 EDO EDO . P 2 EDO C 1 402 10 EDO EDO . Q 2 EDO C 1 403 11 EDO EDO . R 2 EDO C 1 404 16 EDO EDO . S 4 MG C 1 405 4 MG MG . T 3 9QY C 1 406 3 9QY DRG . U 2 EDO D 1 401 3 EDO EDO . V 2 EDO D 1 402 8 EDO EDO . W 2 EDO D 1 403 17 EDO EDO . X 2 EDO D 1 404 19 EDO EDO . Y 3 9QY D 1 405 4 9QY DRG . Z 5 HOH A 1 501 19 HOH HOH . Z 5 HOH A 2 502 30 HOH HOH . Z 5 HOH A 3 503 18 HOH HOH . Z 5 HOH A 4 504 50 HOH HOH . Z 5 HOH A 5 505 7 HOH HOH . Z 5 HOH A 6 506 24 HOH HOH . Z 5 HOH A 7 507 51 HOH HOH . Z 5 HOH A 8 508 58 HOH HOH . Z 5 HOH A 9 509 41 HOH HOH . Z 5 HOH A 10 510 60 HOH HOH . Z 5 HOH A 11 511 40 HOH HOH . Z 5 HOH A 12 512 22 HOH HOH . Z 5 HOH A 13 513 56 HOH HOH . Z 5 HOH A 14 514 54 HOH HOH . Z 5 HOH A 15 515 39 HOH HOH . Z 5 HOH A 16 516 9 HOH HOH . AA 5 HOH B 1 501 16 HOH HOH . AA 5 HOH B 2 502 2 HOH HOH . AA 5 HOH B 3 503 13 HOH HOH . AA 5 HOH B 4 504 20 HOH HOH . AA 5 HOH B 5 505 17 HOH HOH . AA 5 HOH B 6 506 1 HOH HOH . AA 5 HOH B 7 507 44 HOH HOH . AA 5 HOH B 8 508 43 HOH HOH . AA 5 HOH B 9 509 15 HOH HOH . AA 5 HOH B 10 510 23 HOH HOH . AA 5 HOH B 11 511 48 HOH HOH . AA 5 HOH B 12 512 32 HOH HOH . AA 5 HOH B 13 513 31 HOH HOH . AA 5 HOH B 14 514 57 HOH HOH . AA 5 HOH B 15 515 29 HOH HOH . AA 5 HOH B 16 516 45 HOH HOH . BA 5 HOH C 1 501 14 HOH HOH . BA 5 HOH C 2 502 47 HOH HOH . BA 5 HOH C 3 503 3 HOH HOH . BA 5 HOH C 4 504 4 HOH HOH . BA 5 HOH C 5 505 36 HOH HOH . BA 5 HOH C 6 506 26 HOH HOH . BA 5 HOH C 7 507 33 HOH HOH . BA 5 HOH C 8 508 38 HOH HOH . BA 5 HOH C 9 509 25 HOH HOH . BA 5 HOH C 10 510 28 HOH HOH . CA 5 HOH D 1 501 53 HOH HOH . CA 5 HOH D 2 502 52 HOH HOH . CA 5 HOH D 3 503 27 HOH HOH . CA 5 HOH D 4 504 49 HOH HOH . CA 5 HOH D 5 505 37 HOH HOH . CA 5 HOH D 6 506 12 HOH HOH . CA 5 HOH D 7 507 5 HOH HOH . CA 5 HOH D 8 508 8 HOH HOH . CA 5 HOH D 9 509 10 HOH HOH . CA 5 HOH D 10 510 34 HOH HOH . CA 5 HOH D 11 511 21 HOH HOH . CA 5 HOH D 12 512 6 HOH HOH . CA 5 HOH D 13 513 35 HOH HOH . CA 5 HOH D 14 514 11 HOH HOH . CA 5 HOH D 15 515 46 HOH HOH . CA 5 HOH D 16 516 55 HOH HOH . CA 5 HOH D 17 517 42 HOH HOH . CA 5 HOH D 18 518 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 9QY . . . Y 3 -6.597 -34.847 2.747 1 59.12 ? CAA 9QY 405 D 1 HETATM 2 C CAF 9QY . . . Y 3 -1.727 -32.718 1.448 1 61.22 ? CAF 9QY 405 D 1 HETATM 3 C CAG 9QY . . . Y 3 -0.911 -33.378 0.538 1 61.94 ? CAG 9QY 405 D 1 HETATM 4 C CAH 9QY . . . Y 3 -3.104 -32.891 1.386 1 65.59 ? CAH 9QY 405 D 1 HETATM 5 C CAI 9QY . . . Y 3 -1.077 -37.54 -2.873 1 65.78 ? CAI 9QY 405 D 1 HETATM 6 C CAJ 9QY . . . Y 3 -1.467 -34.204 -0.432 1 61.99 ? CAJ 9QY 405 D 1 HETATM 7 C CAK 9QY . . . Y 3 -3.659 -33.719 0.417 1 63.88 ? CAK 9QY 405 D 1 HETATM 8 C CAL 9QY . . . Y 3 -1.597 -36.316 -2.773 1 63.39 ? CAL 9QY 405 D 1 HETATM 9 C CAM 9QY . . . Y 3 -5.078 -40.036 3.972 1 58.33 ? CAM 9QY 405 D 1 HETATM 10 C CAN 9QY . . . Y 3 -3.656 -38.131 -0.411 1 63.26 ? CAN 9QY 405 D 1 HETATM 11 C CAO 9QY . . . Y 3 -3.173 -37.764 0.991 1 57.81 ? CAO 9QY 405 D 1 HETATM 12 C CAP 9QY . . . Y 3 -3.439 -35.2 -1.462 1 59.41 ? CAP 9QY 405 D 1 HETATM 13 C CAS 9QY . . . Y 3 -5.665 -36.873 2.193 1 57.7 ? CAS 9QY 405 D 1 HETATM 14 C CAT 9QY . . . Y 3 -2.845 -34.383 -0.495 1 63.7 ? CAT 9QY 405 D 1 HETATM 15 C CAU 9QY . . . Y 3 -3.892 -40.455 3.389 1 55.92 ? CAU 9QY 405 D 1 HETATM 16 C CAV 9QY . . . Y 3 -5.63 -38.836 3.546 1 62.48 ? CAV 9QY 405 D 1 HETATM 17 C CAW 9QY . . . Y 3 -3.268 -39.703 2.403 1 61.67 ? CAW 9QY 405 D 1 HETATM 18 C CAX 9QY . . . Y 3 -2.662 -37.602 -1.448 1 64.72 ? CAX 9QY 405 D 1 HETATM 19 C CAY 9QY . . . Y 3 -3.834 -38.502 1.975 1 63.51 ? CAY 9QY 405 D 1 HETATM 20 C CAZ 9QY . . . Y 3 -5.029 -38.06 2.559 1 61.16 ? CAZ 9QY 405 D 1 HETATM 21 N NAQ 9QY . . . Y 3 -1.741 -38.347 -2.049 1 68.85 ? NAQ 9QY 405 D 1 HETATM 22 N NBA 9QY . . . Y 3 -2.582 -36.345 -1.874 1 61.36 ? NBA 9QY 405 D 1 HETATM 23 O OAB 9QY . . . Y 3 -5.969 -36.639 1.024 1 63.58 ? OAB 9QY 405 D 1 HETATM 24 O OAC 9QY . . . Y 3 -3.275 -41.613 3.745 1 57.6 ? OAC 9QY 405 D 1 HETATM 25 O OAD 9QY . . . Y 3 -6.791 -38.357 4.068 1 64.65 ? OAD 9QY 405 D 1 HETATM 26 O OAR 9QY . . . Y 3 -5.999 -36.057 3.233 1 64.24 ? OAR 9QY 405 D 1 HETATM 27 CL CL 9QY . . . Y 3 -1.789 -40.29 1.714 1 69.96 ? CL 9QY 405 D 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 50 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #