data_5WMU # _model_server_result.job_id RtEDY2cBz5r0Rxi7dwxZzg _model_server_result.datetime_utc '2024-11-28 01:00:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wmu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 5WMU # _exptl.entry_id 5WMU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WMU _cell.length_a 89.301 _cell.length_b 97.768 _cell.length_c 125.643 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WMU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 298 A CYS 308 1_555 B SG CYS 298 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 A NE2 HIS 336 A HIS 346 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc2 C FE HEM . A HEM 501 1_555 D C CYN . A CYN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 sing metalc ? metalc3 B NE2 HIS 336 B HIS 346 1_555 F FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc4 F FE HEM . B HEM 501 1_555 G C CYN . B CYN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 sing # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 389 n n N H TRP sing 390 n n N H2 TRP sing 391 n n CA C TRP sing 392 n n CA CB TRP sing 393 n n CA HA TRP sing 394 n n C O TRP doub 395 n n C OXT TRP sing 396 n n CB CG TRP sing 397 n n CB HB2 TRP sing 398 n n CB HB3 TRP sing 399 n n CG CD1 TRP doub 400 n y CG CD2 TRP sing 401 n y CD1 NE1 TRP sing 402 n y CD1 HD1 TRP sing 403 n n CD2 CE2 TRP doub 404 n y CD2 CE3 TRP sing 405 n y NE1 CE2 TRP sing 406 n y NE1 HE1 TRP sing 407 n n CE2 CZ2 TRP sing 408 n y CE3 CZ3 TRP doub 409 n y CE3 HE3 TRP sing 410 n n CZ2 CH2 TRP doub 411 n y CZ2 HZ2 TRP sing 412 n n CZ3 CH2 TRP sing 413 n y CZ3 HZ3 TRP sing 414 n n CH2 HH2 TRP sing 415 n n OXT HXT TRP sing 416 n n # _atom_sites.entry_id 5WMU _atom_sites.fract_transf_matrix[1][1] 0.011198 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010228 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007959 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 501 501 HEM HEM . D 3 CYN A 1 502 500 CYN CYN . E 4 TRP A 1 503 502 TRP TRP . F 2 HEM B 1 501 501 HEM HEM . G 3 CYN B 1 502 500 CYN CYN . H 4 TRP B 1 503 502 TRP TRP . I 5 HOH A 1 601 83 HOH HOH . I 5 HOH A 2 602 98 HOH HOH . I 5 HOH A 3 603 88 HOH HOH . I 5 HOH A 4 604 43 HOH HOH . I 5 HOH A 5 605 184 HOH HOH . I 5 HOH A 6 606 128 HOH HOH . I 5 HOH A 7 607 87 HOH HOH . I 5 HOH A 8 608 5 HOH HOH . I 5 HOH A 9 609 146 HOH HOH . I 5 HOH A 10 610 29 HOH HOH . I 5 HOH A 11 611 190 HOH HOH . I 5 HOH A 12 612 85 HOH HOH . I 5 HOH A 13 613 142 HOH HOH . I 5 HOH A 14 614 144 HOH HOH . I 5 HOH A 15 615 97 HOH HOH . I 5 HOH A 16 616 189 HOH HOH . I 5 HOH A 17 617 41 HOH HOH . I 5 HOH A 18 618 54 HOH HOH . I 5 HOH A 19 619 187 HOH HOH . I 5 HOH A 20 620 115 HOH HOH . I 5 HOH A 21 621 86 HOH HOH . I 5 HOH A 22 622 113 HOH HOH . I 5 HOH A 23 623 185 HOH HOH . I 5 HOH A 24 624 151 HOH HOH . I 5 HOH A 25 625 104 HOH HOH . I 5 HOH A 26 626 18 HOH HOH . I 5 HOH A 27 627 118 HOH HOH . I 5 HOH A 28 628 127 HOH HOH . I 5 HOH A 29 629 84 HOH HOH . I 5 HOH A 30 630 15 HOH HOH . I 5 HOH A 31 631 123 HOH HOH . I 5 HOH A 32 632 90 HOH HOH . I 5 HOH A 33 633 121 HOH HOH . I 5 HOH A 34 634 11 HOH HOH . I 5 HOH A 35 635 35 HOH HOH . I 5 HOH A 36 636 9 HOH HOH . I 5 HOH A 37 637 194 HOH HOH . I 5 HOH A 38 638 129 HOH HOH . I 5 HOH A 39 639 140 HOH HOH . I 5 HOH A 40 640 195 HOH HOH . I 5 HOH A 41 641 12 HOH HOH . I 5 HOH A 42 642 136 HOH HOH . I 5 HOH A 43 643 131 HOH HOH . I 5 HOH A 44 644 147 HOH HOH . I 5 HOH A 45 645 141 HOH HOH . I 5 HOH A 46 646 120 HOH HOH . I 5 HOH A 47 647 188 HOH HOH . I 5 HOH A 48 648 114 HOH HOH . I 5 HOH A 49 649 108 HOH HOH . I 5 HOH A 50 650 119 HOH HOH . I 5 HOH A 51 651 2 HOH HOH . I 5 HOH A 52 652 111 HOH HOH . I 5 HOH A 53 653 16 HOH HOH . I 5 HOH A 54 654 154 HOH HOH . I 5 HOH A 55 655 96 HOH HOH . I 5 HOH A 56 656 133 HOH HOH . I 5 HOH A 57 657 110 HOH HOH . I 5 HOH A 58 658 122 HOH HOH . I 5 HOH A 59 659 91 HOH HOH . I 5 HOH A 60 660 31 HOH HOH . I 5 HOH A 61 661 58 HOH HOH . I 5 HOH A 62 662 89 HOH HOH . I 5 HOH A 63 663 155 HOH HOH . I 5 HOH A 64 664 145 HOH HOH . I 5 HOH A 65 665 94 HOH HOH . I 5 HOH A 66 666 19 HOH HOH . I 5 HOH A 67 667 102 HOH HOH . I 5 HOH A 68 668 22 HOH HOH . I 5 HOH A 69 669 193 HOH HOH . I 5 HOH A 70 670 95 HOH HOH . I 5 HOH A 71 671 183 HOH HOH . I 5 HOH A 72 672 107 HOH HOH . I 5 HOH A 73 673 132 HOH HOH . I 5 HOH A 74 674 99 HOH HOH . I 5 HOH A 75 675 6 HOH HOH . I 5 HOH A 76 676 148 HOH HOH . I 5 HOH A 77 677 152 HOH HOH . I 5 HOH A 78 678 10 HOH HOH . I 5 HOH A 79 679 109 HOH HOH . I 5 HOH A 80 680 153 HOH HOH . I 5 HOH A 81 681 135 HOH HOH . I 5 HOH A 82 682 139 HOH HOH . I 5 HOH A 83 683 93 HOH HOH . I 5 HOH A 84 684 126 HOH HOH . I 5 HOH A 85 685 112 HOH HOH . I 5 HOH A 86 686 149 HOH HOH . I 5 HOH A 87 687 125 HOH HOH . I 5 HOH A 88 688 36 HOH HOH . I 5 HOH A 89 689 116 HOH HOH . I 5 HOH A 90 690 44 HOH HOH . I 5 HOH A 91 691 134 HOH HOH . I 5 HOH A 92 692 124 HOH HOH . I 5 HOH A 93 693 103 HOH HOH . I 5 HOH A 94 694 55 HOH HOH . I 5 HOH A 95 695 182 HOH HOH . I 5 HOH A 96 696 49 HOH HOH . I 5 HOH A 97 697 100 HOH HOH . I 5 HOH A 98 698 20 HOH HOH . I 5 HOH A 99 699 34 HOH HOH . I 5 HOH A 100 700 48 HOH HOH . I 5 HOH A 101 701 101 HOH HOH . I 5 HOH A 102 702 42 HOH HOH . I 5 HOH A 103 703 117 HOH HOH . I 5 HOH A 104 704 105 HOH HOH . I 5 HOH A 105 705 191 HOH HOH . I 5 HOH A 106 706 143 HOH HOH . I 5 HOH A 107 707 92 HOH HOH . I 5 HOH A 108 708 106 HOH HOH . I 5 HOH A 109 709 186 HOH HOH . J 5 HOH B 1 601 196 HOH HOH . J 5 HOH B 2 602 53 HOH HOH . J 5 HOH B 3 603 167 HOH HOH . J 5 HOH B 4 604 8 HOH HOH . J 5 HOH B 5 605 70 HOH HOH . J 5 HOH B 6 606 200 HOH HOH . J 5 HOH B 7 607 173 HOH HOH . J 5 HOH B 8 608 21 HOH HOH . J 5 HOH B 9 609 192 HOH HOH . J 5 HOH B 10 610 50 HOH HOH . J 5 HOH B 11 611 164 HOH HOH . J 5 HOH B 12 612 26 HOH HOH . J 5 HOH B 13 613 1 HOH HOH . J 5 HOH B 14 614 130 HOH HOH . J 5 HOH B 15 615 218 HOH HOH . J 5 HOH B 16 616 201 HOH HOH . J 5 HOH B 17 617 65 HOH HOH . J 5 HOH B 18 618 33 HOH HOH . J 5 HOH B 19 619 213 HOH HOH . J 5 HOH B 20 620 180 HOH HOH . J 5 HOH B 21 621 77 HOH HOH . J 5 HOH B 22 622 208 HOH HOH . J 5 HOH B 23 623 178 HOH HOH . J 5 HOH B 24 624 222 HOH HOH . J 5 HOH B 25 625 179 HOH HOH . J 5 HOH B 26 626 202 HOH HOH . J 5 HOH B 27 627 37 HOH HOH . J 5 HOH B 28 628 175 HOH HOH . J 5 HOH B 29 629 17 HOH HOH . J 5 HOH B 30 630 172 HOH HOH . J 5 HOH B 31 631 27 HOH HOH . J 5 HOH B 32 632 214 HOH HOH . J 5 HOH B 33 633 165 HOH HOH . J 5 HOH B 34 634 223 HOH HOH . J 5 HOH B 35 635 51 HOH HOH . J 5 HOH B 36 636 171 HOH HOH . J 5 HOH B 37 637 158 HOH HOH . J 5 HOH B 38 638 39 HOH HOH . J 5 HOH B 39 639 82 HOH HOH . J 5 HOH B 40 640 161 HOH HOH . J 5 HOH B 41 641 197 HOH HOH . J 5 HOH B 42 642 210 HOH HOH . J 5 HOH B 43 643 160 HOH HOH . J 5 HOH B 44 644 40 HOH HOH . J 5 HOH B 45 645 63 HOH HOH . J 5 HOH B 46 646 205 HOH HOH . J 5 HOH B 47 647 67 HOH HOH . J 5 HOH B 48 648 60 HOH HOH . J 5 HOH B 49 649 198 HOH HOH . J 5 HOH B 50 650 168 HOH HOH . J 5 HOH B 51 651 211 HOH HOH . J 5 HOH B 52 652 162 HOH HOH . J 5 HOH B 53 653 4 HOH HOH . J 5 HOH B 54 654 7 HOH HOH . J 5 HOH B 55 655 59 HOH HOH . J 5 HOH B 56 656 30 HOH HOH . J 5 HOH B 57 657 215 HOH HOH . J 5 HOH B 58 658 66 HOH HOH . J 5 HOH B 59 659 209 HOH HOH . J 5 HOH B 60 660 206 HOH HOH . J 5 HOH B 61 661 176 HOH HOH . J 5 HOH B 62 662 220 HOH HOH . J 5 HOH B 63 663 28 HOH HOH . J 5 HOH B 64 664 159 HOH HOH . J 5 HOH B 65 665 3 HOH HOH . J 5 HOH B 66 666 57 HOH HOH . J 5 HOH B 67 667 204 HOH HOH . J 5 HOH B 68 668 199 HOH HOH . J 5 HOH B 69 669 74 HOH HOH . J 5 HOH B 70 670 169 HOH HOH . J 5 HOH B 71 671 23 HOH HOH . J 5 HOH B 72 672 71 HOH HOH . J 5 HOH B 73 673 78 HOH HOH . J 5 HOH B 74 674 80 HOH HOH . J 5 HOH B 75 675 72 HOH HOH . J 5 HOH B 76 676 25 HOH HOH . J 5 HOH B 77 677 62 HOH HOH . J 5 HOH B 78 678 137 HOH HOH . J 5 HOH B 79 679 13 HOH HOH . J 5 HOH B 80 680 181 HOH HOH . J 5 HOH B 81 681 177 HOH HOH . J 5 HOH B 82 682 52 HOH HOH . J 5 HOH B 83 683 156 HOH HOH . J 5 HOH B 84 684 219 HOH HOH . J 5 HOH B 85 685 174 HOH HOH . J 5 HOH B 86 686 150 HOH HOH . J 5 HOH B 87 687 207 HOH HOH . J 5 HOH B 88 688 38 HOH HOH . J 5 HOH B 89 689 73 HOH HOH . J 5 HOH B 90 690 56 HOH HOH . J 5 HOH B 91 691 203 HOH HOH . J 5 HOH B 92 692 64 HOH HOH . J 5 HOH B 93 693 76 HOH HOH . J 5 HOH B 94 694 24 HOH HOH . J 5 HOH B 95 695 47 HOH HOH . J 5 HOH B 96 696 166 HOH HOH . J 5 HOH B 97 697 157 HOH HOH . J 5 HOH B 98 698 170 HOH HOH . J 5 HOH B 99 699 216 HOH HOH . J 5 HOH B 100 700 212 HOH HOH . J 5 HOH B 101 701 32 HOH HOH . J 5 HOH B 102 702 138 HOH HOH . J 5 HOH B 103 703 81 HOH HOH . J 5 HOH B 104 704 217 HOH HOH . J 5 HOH B 105 705 14 HOH HOH . J 5 HOH B 106 706 221 HOH HOH . J 5 HOH B 107 707 69 HOH HOH . J 5 HOH B 108 708 163 HOH HOH . J 5 HOH B 109 709 46 HOH HOH . J 5 HOH B 110 710 224 HOH HOH . J 5 HOH B 111 711 68 HOH HOH . J 5 HOH B 112 712 79 HOH HOH . J 5 HOH B 113 713 61 HOH HOH . J 5 HOH B 114 714 45 HOH HOH . J 5 HOH B 115 715 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . E 4 113.191 -4.443 147.223 1 65.58 ? N TRP 503 A 1 HETATM 2 C CA TRP . . . E 4 113.469 -5.889 146.942 1 65.36 ? CA TRP 503 A 1 HETATM 3 C C TRP . . . E 4 113.376 -6.725 148.217 1 65.42 ? C TRP 503 A 1 HETATM 4 O O TRP . . . E 4 113.665 -7.921 148.215 1 68.1 ? O TRP 503 A 1 HETATM 5 C CB TRP . . . E 4 114.854 -6.079 146.309 1 65.86 ? CB TRP 503 A 1 HETATM 6 C CG TRP . . . E 4 114.974 -5.566 144.919 1 65.36 ? CG TRP 503 A 1 HETATM 7 C CD1 TRP . . . E 4 114.25 -5.963 143.835 1 64.92 ? CD1 TRP 503 A 1 HETATM 8 C CD2 TRP . . . E 4 115.904 -4.589 144.446 1 64.5 ? CD2 TRP 503 A 1 HETATM 9 N NE1 TRP . . . E 4 114.654 -5.277 142.715 1 63.6 ? NE1 TRP 503 A 1 HETATM 10 C CE2 TRP . . . E 4 115.671 -4.427 143.062 1 64.26 ? CE2 TRP 503 A 1 HETATM 11 C CE3 TRP . . . E 4 116.907 -3.827 145.059 1 65.29 ? CE3 TRP 503 A 1 HETATM 12 C CZ2 TRP . . . E 4 116.409 -3.533 142.277 1 64.33 ? CZ2 TRP 503 A 1 HETATM 13 C CZ3 TRP . . . E 4 117.642 -2.933 144.277 1 65.7 ? CZ3 TRP 503 A 1 HETATM 14 C CH2 TRP . . . E 4 117.386 -2.796 142.901 1 64.9 ? CH2 TRP 503 A 1 HETATM 15 O OXT TRP . . . E 4 113.021 -6.228 149.287 1 64.61 ? OXT TRP 503 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #