data_5WNG # _model_server_result.job_id 3DDa7KThaImQ7yMKM4Tv9Q _model_server_result.datetime_utc '2024-10-28 02:23:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wng # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":900}' # _entry.id 5WNG # _exptl.entry_id 5WNG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 514.642 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-N-(3-cyanophenyl)-2-(3-{[(6S)-6-(dimethylamino)-4,5,6,7-tetrahydro-1,3-benzothiazol-2-yl]carbamoyl}phenyl)pyrrolidine-1-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.1 _cell.angle_gamma 90 _cell.entry_id 5WNG _cell.length_a 160.924 _cell.length_b 81.415 _cell.length_c 168.892 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WNG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C28 H30 N6 O2 S' _chem_comp.formula_weight 514.642 _chem_comp.id B4Y _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-N-(3-cyanophenyl)-2-(3-{[(6S)-6-(dimethylamino)-4,5,6,7-tetrahydro-1,3-benzothiazol-2-yl]carbamoyl}phenyl)pyrrolidine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C31 C30 B4Y doub 70 n y C31 C32 B4Y sing 71 n y C30 C29 B4Y sing 72 n y C15 C14 B4Y doub 73 n y C15 C16 B4Y sing 74 n y C32 C27 B4Y doub 75 n y C29 C33 B4Y sing 76 n n C29 C28 B4Y doub 77 n y C33 N34 B4Y trip 78 n n C14 C13 B4Y sing 79 n y O20 C18 B4Y doub 80 n n C18 N19 B4Y sing 81 n n C18 C16 B4Y sing 82 n n N19 C2 B4Y sing 83 n n C16 C17 B4Y doub 84 n y C27 C28 B4Y sing 85 n y C27 N25 B4Y sing 86 n n O26 C24 B4Y doub 87 n n C2 S3 B4Y sing 88 n y C2 N1 B4Y doub 89 n y S3 C4 B4Y sing 90 n y N1 C5 B4Y sing 91 n y C13 C12 B4Y doub 92 n y C4 C5 B4Y doub 93 n y C4 C9 B4Y sing 94 n n C5 C6 B4Y sing 95 n n C8 C9 B4Y sing 96 n n C8 N10 B4Y sing 97 n n C8 C7 B4Y sing 98 n n C6 C7 B4Y sing 99 n n C17 C12 B4Y sing 100 n y C37 N10 B4Y sing 101 n n N25 C24 B4Y sing 102 n n C24 N23 B4Y sing 103 n n N10 C36 B4Y sing 104 n n C12 C11 B4Y sing 105 n n N23 C11 B4Y sing 106 n n N23 C22 B4Y sing 107 n n C11 C35 B4Y sing 108 n n C22 C21 B4Y sing 109 n n C35 C21 B4Y sing 110 n n C6 H1 B4Y sing 111 n n C6 H2 B4Y sing 112 n n C7 H3 B4Y sing 113 n n C7 H4 B4Y sing 114 n n C8 H5 B4Y sing 115 n n C9 H6 B4Y sing 116 n n C9 H7 B4Y sing 117 n n C11 H9 B4Y sing 118 n n C13 H10 B4Y sing 119 n n C14 H11 B4Y sing 120 n n C15 H12 B4Y sing 121 n n C17 H13 B4Y sing 122 n n N19 H14 B4Y sing 123 n n C21 H15 B4Y sing 124 n n C21 H16 B4Y sing 125 n n C22 H17 B4Y sing 126 n n C22 H18 B4Y sing 127 n n N25 H19 B4Y sing 128 n n C28 H20 B4Y sing 129 n n C30 H21 B4Y sing 130 n n C31 H22 B4Y sing 131 n n C32 H23 B4Y sing 132 n n C35 H24 B4Y sing 133 n n C35 H25 B4Y sing 134 n n C36 H26 B4Y sing 135 n n C36 H27 B4Y sing 136 n n C36 H28 B4Y sing 137 n n C37 H29 B4Y sing 138 n n C37 H30 B4Y sing 139 n n C37 H31 B4Y sing 140 n n # _atom_sites.entry_id 5WNG _atom_sites.fract_transf_matrix[1][1] 0.006214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002911 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012283 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006538 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 B4Y A 1 900 900 B4Y B4Y . F 2 B4Y B 1 900 900 B4Y B4Y . G 2 B4Y C 1 900 900 B4Y B4Y . H 2 B4Y D 1 900 900 B4Y B4Y . I 3 HOH A 1 1001 743 HOH HOH . I 3 HOH A 2 1002 754 HOH HOH . I 3 HOH A 3 1003 524 HOH HOH . I 3 HOH A 4 1004 710 HOH HOH . I 3 HOH A 5 1005 547 HOH HOH . I 3 HOH A 6 1006 623 HOH HOH . I 3 HOH A 7 1007 558 HOH HOH . I 3 HOH A 8 1008 712 HOH HOH . I 3 HOH A 9 1009 699 HOH HOH . I 3 HOH A 10 1010 650 HOH HOH . I 3 HOH A 11 1011 512 HOH HOH . I 3 HOH A 12 1012 582 HOH HOH . I 3 HOH A 13 1013 619 HOH HOH . I 3 HOH A 14 1014 641 HOH HOH . I 3 HOH A 15 1015 734 HOH HOH . I 3 HOH A 16 1016 748 HOH HOH . I 3 HOH A 17 1017 526 HOH HOH . I 3 HOH A 18 1018 730 HOH HOH . I 3 HOH A 19 1019 705 HOH HOH . I 3 HOH A 20 1020 591 HOH HOH . I 3 HOH A 21 1021 602 HOH HOH . I 3 HOH A 22 1022 502 HOH HOH . I 3 HOH A 23 1023 694 HOH HOH . I 3 HOH A 24 1024 697 HOH HOH . I 3 HOH A 25 1025 745 HOH HOH . I 3 HOH A 26 1026 678 HOH HOH . I 3 HOH A 27 1027 560 HOH HOH . I 3 HOH A 28 1028 652 HOH HOH . I 3 HOH A 29 1029 622 HOH HOH . I 3 HOH A 30 1030 671 HOH HOH . I 3 HOH A 31 1031 509 HOH HOH . I 3 HOH A 32 1032 614 HOH HOH . J 3 HOH B 1 1001 538 HOH HOH . J 3 HOH B 2 1002 653 HOH HOH . J 3 HOH B 3 1003 688 HOH HOH . J 3 HOH B 4 1004 739 HOH HOH . J 3 HOH B 5 1005 567 HOH HOH . J 3 HOH B 6 1006 529 HOH HOH . J 3 HOH B 7 1007 703 HOH HOH . J 3 HOH B 8 1008 577 HOH HOH . J 3 HOH B 9 1009 520 HOH HOH . J 3 HOH B 10 1010 550 HOH HOH . J 3 HOH B 11 1011 714 HOH HOH . J 3 HOH B 12 1012 505 HOH HOH . J 3 HOH B 13 1013 609 HOH HOH . J 3 HOH B 14 1014 570 HOH HOH . J 3 HOH B 15 1015 725 HOH HOH . J 3 HOH B 16 1016 696 HOH HOH . J 3 HOH B 17 1017 551 HOH HOH . K 3 HOH C 1 1001 517 HOH HOH . K 3 HOH C 2 1002 698 HOH HOH . K 3 HOH C 3 1003 500 HOH HOH . K 3 HOH C 4 1004 543 HOH HOH . K 3 HOH C 5 1005 659 HOH HOH . K 3 HOH C 6 1006 667 HOH HOH . K 3 HOH C 7 1007 574 HOH HOH . K 3 HOH C 8 1008 722 HOH HOH . K 3 HOH C 9 1009 613 HOH HOH . K 3 HOH C 10 1010 629 HOH HOH . K 3 HOH C 11 1011 660 HOH HOH . K 3 HOH C 12 1012 566 HOH HOH . K 3 HOH C 13 1013 648 HOH HOH . K 3 HOH C 14 1014 695 HOH HOH . K 3 HOH C 15 1015 756 HOH HOH . K 3 HOH C 16 1016 732 HOH HOH . K 3 HOH C 17 1017 727 HOH HOH . K 3 HOH C 18 1018 552 HOH HOH . L 3 HOH D 1 1001 584 HOH HOH . L 3 HOH D 2 1002 544 HOH HOH . L 3 HOH D 3 1003 525 HOH HOH . L 3 HOH D 4 1004 546 HOH HOH . L 3 HOH D 5 1005 731 HOH HOH . L 3 HOH D 6 1006 700 HOH HOH . L 3 HOH D 7 1007 516 HOH HOH . L 3 HOH D 8 1008 643 HOH HOH . L 3 HOH D 9 1009 563 HOH HOH . L 3 HOH D 10 1010 510 HOH HOH . L 3 HOH D 11 1011 501 HOH HOH . L 3 HOH D 12 1012 741 HOH HOH . L 3 HOH D 13 1013 707 HOH HOH . L 3 HOH D 14 1014 737 HOH HOH . L 3 HOH D 15 1015 533 HOH HOH . L 3 HOH D 16 1016 689 HOH HOH . L 3 HOH D 17 1017 590 HOH HOH . L 3 HOH D 18 1018 755 HOH HOH . L 3 HOH D 19 1019 549 HOH HOH . L 3 HOH D 20 1020 595 HOH HOH . L 3 HOH D 21 1021 616 HOH HOH . L 3 HOH D 22 1022 587 HOH HOH . L 3 HOH D 23 1023 536 HOH HOH . L 3 HOH D 24 1024 617 HOH HOH . L 3 HOH D 25 1025 532 HOH HOH . L 3 HOH D 26 1026 632 HOH HOH . L 3 HOH D 27 1027 606 HOH HOH . L 3 HOH D 28 1028 618 HOH HOH . L 3 HOH D 29 1029 683 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 B4Y . . . E 2 -18.142 -8.085 41.04 1 86.88 ? N1 B4Y 900 A 1 HETATM 2 C C2 B4Y . . . E 2 -16.93 -8.508 40.866 1 86.42 ? C2 B4Y 900 A 1 HETATM 3 S S3 B4Y . . . E 2 -16.902 -10.211 40.916 1 87.71 ? S3 B4Y 900 A 1 HETATM 4 C C4 B4Y . . . E 2 -18.638 -10.258 41.186 1 87.52 ? C4 B4Y 900 A 1 HETATM 5 C C5 B4Y . . . E 2 -19.093 -8.986 41.236 1 87.19 ? C5 B4Y 900 A 1 HETATM 6 C C6 B4Y . . . E 2 -20.565 -8.643 41.453 1 87.19 ? C6 B4Y 900 A 1 HETATM 7 C C7 B4Y . . . E 2 -21.273 -9.842 42.1 1 88.25 ? C7 B4Y 900 A 1 HETATM 8 C C8 B4Y . . . E 2 -20.987 -11.142 41.313 1 88.61 ? C8 B4Y 900 A 1 HETATM 9 C C9 B4Y . . . E 2 -19.483 -11.507 41.368 1 88.02 ? C9 B4Y 900 A 1 HETATM 10 N N10 B4Y . . . E 2 -21.848 -12.28 41.742 1 90.82 ? N10 B4Y 900 A 1 HETATM 11 C C11 B4Y . . . E 2 -13.093 -3.844 42.748 1 85.91 ? C11 B4Y 900 A 1 HETATM 12 C C12 B4Y . . . E 2 -12.786 -4.951 41.755 1 87.42 ? C12 B4Y 900 A 1 HETATM 13 C C13 B4Y . . . E 2 -11.571 -5.036 41.062 1 89.17 ? C13 B4Y 900 A 1 HETATM 14 C C14 B4Y . . . E 2 -11.319 -6.075 40.168 1 89.17 ? C14 B4Y 900 A 1 HETATM 15 C C15 B4Y . . . E 2 -12.281 -7.057 39.97 1 87.59 ? C15 B4Y 900 A 1 HETATM 16 C C16 B4Y . . . E 2 -13.505 -6.995 40.668 1 86.29 ? C16 B4Y 900 A 1 HETATM 17 C C17 B4Y . . . E 2 -13.745 -5.934 41.557 1 86.68 ? C17 B4Y 900 A 1 HETATM 18 C C18 B4Y . . . E 2 -14.552 -8.025 40.478 1 85.38 ? C18 B4Y 900 A 1 HETATM 19 N N19 B4Y . . . E 2 -15.847 -7.662 40.642 1 85.54 ? N19 B4Y 900 A 1 HETATM 20 O O20 B4Y . . . E 2 -14.223 -9.163 40.197 1 85.18 ? O20 B4Y 900 A 1 HETATM 21 C C21 B4Y . . . E 2 -11.395 -3.881 44.461 1 88.6 ? C21 B4Y 900 A 1 HETATM 22 C C22 B4Y . . . E 2 -11.287 -2.559 43.655 1 88.74 ? C22 B4Y 900 A 1 HETATM 23 N N23 B4Y . . . E 2 -12.302 -2.608 42.577 1 86.52 ? N23 B4Y 900 A 1 HETATM 24 C C24 B4Y . . . E 2 -12.507 -1.635 41.647 1 84.86 ? C24 B4Y 900 A 1 HETATM 25 N N25 B4Y . . . E 2 -11.685 -0.548 41.641 1 83.9 ? N25 B4Y 900 A 1 HETATM 26 O O26 B4Y . . . E 2 -13.391 -1.769 40.811 1 84.02 ? O26 B4Y 900 A 1 HETATM 27 C C27 B4Y . . . E 2 -11.714 0.569 40.786 1 83.45 ? C27 B4Y 900 A 1 HETATM 28 C C28 B4Y . . . E 2 -10.618 1.433 40.824 1 84.44 ? C28 B4Y 900 A 1 HETATM 29 C C29 B4Y . . . E 2 -10.603 2.588 40.026 1 85.26 ? C29 B4Y 900 A 1 HETATM 30 C C30 B4Y . . . E 2 -11.707 2.901 39.217 1 84.99 ? C30 B4Y 900 A 1 HETATM 31 C C31 B4Y . . . E 2 -12.816 2.063 39.212 1 83.66 ? C31 B4Y 900 A 1 HETATM 32 C C32 B4Y . . . E 2 -12.819 0.905 39.982 1 82.69 ? C32 B4Y 900 A 1 HETATM 33 C C33 B4Y . . . E 2 -9.467 3.446 40.054 1 87.76 ? C33 B4Y 900 A 1 HETATM 34 N N34 B4Y . . . E 2 -8.567 4.133 40.074 1 90.88 ? N34 B4Y 900 A 1 HETATM 35 C C35 B4Y . . . E 2 -12.862 -4.313 44.199 1 86.02 ? C35 B4Y 900 A 1 HETATM 36 C C36 B4Y . . . E 2 -21.565 -12.889 43.059 1 92.53 ? C36 B4Y 900 A 1 HETATM 37 C C37 B4Y . . . E 2 -23.292 -12.03 41.563 1 91.22 ? C37 B4Y 900 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 37 #