data_5WNH # _model_server_result.job_id aCFzGS7jN6yi2f5deO1Rbg _model_server_result.datetime_utc '2024-10-28 02:27:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wnh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":900}' # _entry.id 5WNH # _exptl.entry_id 5WNH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 486.589 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-N-(3-cyanophenyl)-2-{3-[(5-methyl-4,5,6,7-tetrahydro[1,3]thiazolo[5,4-c]pyridin-2-yl)carbamoyl]phenyl}pyrrolidine-1-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.68 _cell.angle_gamma 90 _cell.entry_id 5WNH _cell.length_a 162.923 _cell.length_b 81.975 _cell.length_c 167.476 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WNH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C26 H26 N6 O2 S' _chem_comp.formula_weight 486.589 _chem_comp.id B5G _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-N-(3-cyanophenyl)-2-{3-[(5-methyl-4,5,6,7-tetrahydro[1,3]thiazolo[5,4-c]pyridin-2-yl)carbamoyl]phenyl}pyrrolidine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C32 C31 B5G doub 70 n y C32 C33 B5G sing 71 n y C31 C30 B5G sing 72 n y C33 C28 B5G doub 73 n y C10 C9 B5G doub 74 n y C10 C11 B5G sing 75 n y C30 C34 B5G sing 76 n n C30 C29 B5G doub 77 n y C34 N35 B5G trip 78 n n O14 C13 B5G doub 79 n n C9 C8 B5G sing 80 n y C13 C11 B5G sing 81 n n C13 N23 B5G sing 82 n n S26 C24 B5G sing 83 n y S26 C1 B5G sing 84 n y C11 C12 B5G doub 85 n y O21 C20 B5G doub 86 n n C6 C1 B5G sing 87 n n C6 N5 B5G sing 88 n n C24 N23 B5G sing 89 n n C24 N25 B5G doub 90 n y C1 C2 B5G doub 91 n y C28 C29 B5G sing 92 n y C28 N22 B5G sing 93 n n N25 C2 B5G sing 94 n y C2 C3 B5G sing 95 n n C8 C7 B5G doub 96 n y C4 C3 B5G sing 97 n n C4 N5 B5G sing 98 n n N5 C27 B5G sing 99 n n C12 C7 B5G sing 100 n y C20 N22 B5G sing 101 n n C20 N16 B5G sing 102 n n C7 C15 B5G sing 103 n n N16 C15 B5G sing 104 n n N16 C17 B5G sing 105 n n C15 C19 B5G sing 106 n n C17 C18 B5G sing 107 n n C19 C18 B5G sing 108 n n C4 H1 B5G sing 109 n n C4 H2 B5G sing 110 n n C6 H3 B5G sing 111 n n C6 H4 B5G sing 112 n n C10 H5 B5G sing 113 n n C3 H6 B5G sing 114 n n C3 H7 B5G sing 115 n n C9 H9 B5G sing 116 n n C12 H10 B5G sing 117 n n C27 H11 B5G sing 118 n n C27 H12 B5G sing 119 n n C27 H13 B5G sing 120 n n C8 H14 B5G sing 121 n n C15 H15 B5G sing 122 n n C17 H16 B5G sing 123 n n C17 H17 B5G sing 124 n n C18 H18 B5G sing 125 n n C18 H19 B5G sing 126 n n C19 H20 B5G sing 127 n n C19 H21 B5G sing 128 n n N22 H22 B5G sing 129 n n N23 H23 B5G sing 130 n n C29 H24 B5G sing 131 n n C31 H25 B5G sing 132 n n C32 H26 B5G sing 133 n n C33 H27 B5G sing 134 n n # _atom_sites.entry_id 5WNH _atom_sites.fract_transf_matrix[1][1] 0.006138 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002951 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012199 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006625 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 B5G A 1 900 900 B5G B5G . F 2 B5G B 1 900 900 B5G B5G . G 2 B5G C 1 900 900 B5G B5G . H 2 B5G D 1 900 900 B5G B5G . I 3 HOH A 1 1001 523 HOH HOH . I 3 HOH A 2 1002 738 HOH HOH . I 3 HOH A 3 1003 747 HOH HOH . I 3 HOH A 4 1004 746 HOH HOH . I 3 HOH A 5 1005 740 HOH HOH . I 3 HOH A 6 1006 530 HOH HOH . I 3 HOH A 7 1007 643 HOH HOH . I 3 HOH A 8 1008 555 HOH HOH . I 3 HOH A 9 1009 658 HOH HOH . I 3 HOH A 10 1010 739 HOH HOH . I 3 HOH A 11 1011 502 HOH HOH . I 3 HOH A 12 1012 672 HOH HOH . I 3 HOH A 13 1013 591 HOH HOH . I 3 HOH A 14 1014 561 HOH HOH . I 3 HOH A 15 1015 512 HOH HOH . I 3 HOH A 16 1016 628 HOH HOH . I 3 HOH A 17 1017 511 HOH HOH . I 3 HOH A 18 1018 712 HOH HOH . I 3 HOH A 19 1019 619 HOH HOH . I 3 HOH A 20 1020 547 HOH HOH . I 3 HOH A 21 1021 623 HOH HOH . I 3 HOH A 22 1022 539 HOH HOH . I 3 HOH A 23 1023 602 HOH HOH . I 3 HOH A 24 1024 641 HOH HOH . I 3 HOH A 25 1025 662 HOH HOH . I 3 HOH A 26 1026 509 HOH HOH . I 3 HOH A 27 1027 737 HOH HOH . I 3 HOH A 28 1028 542 HOH HOH . I 3 HOH A 29 1029 624 HOH HOH . I 3 HOH A 30 1030 642 HOH HOH . I 3 HOH A 31 1031 729 HOH HOH . I 3 HOH A 32 1032 548 HOH HOH . I 3 HOH A 33 1033 704 HOH HOH . J 3 HOH B 1 1001 532 HOH HOH . J 3 HOH B 2 1002 670 HOH HOH . J 3 HOH B 3 1003 745 HOH HOH . J 3 HOH B 4 1004 567 HOH HOH . J 3 HOH B 5 1005 626 HOH HOH . J 3 HOH B 6 1006 728 HOH HOH . J 3 HOH B 7 1007 678 HOH HOH . J 3 HOH B 8 1008 690 HOH HOH . J 3 HOH B 9 1009 573 HOH HOH . J 3 HOH B 10 1010 654 HOH HOH . K 3 HOH C 1 1001 582 HOH HOH . K 3 HOH C 2 1002 742 HOH HOH . K 3 HOH C 3 1003 578 HOH HOH . K 3 HOH C 4 1004 669 HOH HOH . K 3 HOH C 5 1005 528 HOH HOH . K 3 HOH C 6 1006 741 HOH HOH . K 3 HOH C 7 1007 544 HOH HOH . K 3 HOH C 8 1008 501 HOH HOH . K 3 HOH C 9 1009 677 HOH HOH . L 3 HOH D 1 1001 556 HOH HOH . L 3 HOH D 2 1002 652 HOH HOH . L 3 HOH D 3 1003 698 HOH HOH . L 3 HOH D 4 1004 507 HOH HOH . L 3 HOH D 5 1005 536 HOH HOH . L 3 HOH D 6 1006 524 HOH HOH . L 3 HOH D 7 1007 743 HOH HOH . L 3 HOH D 8 1008 521 HOH HOH . L 3 HOH D 9 1009 576 HOH HOH . L 3 HOH D 10 1010 673 HOH HOH . L 3 HOH D 11 1011 603 HOH HOH . L 3 HOH D 12 1012 504 HOH HOH . L 3 HOH D 13 1013 593 HOH HOH . L 3 HOH D 14 1014 646 HOH HOH . L 3 HOH D 15 1015 518 HOH HOH . L 3 HOH D 16 1016 622 HOH HOH . L 3 HOH D 17 1017 686 HOH HOH . L 3 HOH D 18 1018 634 HOH HOH . L 3 HOH D 19 1019 611 HOH HOH . L 3 HOH D 20 1020 550 HOH HOH . L 3 HOH D 21 1021 551 HOH HOH . L 3 HOH D 22 1022 579 HOH HOH . L 3 HOH D 23 1023 610 HOH HOH . L 3 HOH D 24 1024 575 HOH HOH . L 3 HOH D 25 1025 722 HOH HOH . L 3 HOH D 26 1026 682 HOH HOH . L 3 HOH D 27 1027 588 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 B5G . . . E 2 -21.218 -10.484 40.85 1 103.35 ? C4 B5G 900 A 1 HETATM 2 C C6 B5G . . . E 2 -19.118 -11.788 40.314 1 104.27 ? C6 B5G 900 A 1 HETATM 3 C C10 B5G . . . E 2 -12.314 -6.652 39.576 1 103.68 ? C10 B5G 900 A 1 HETATM 4 C C20 B5G . . . E 2 -12.72 -1.238 41.182 1 103.24 ? C20 B5G 900 A 1 HETATM 5 C C24 B5G . . . E 2 -16.855 -8.517 40.331 1 105.19 ? C24 B5G 900 A 1 HETATM 6 C C28 B5G . . . E 2 -11.942 1.005 40.381 1 104.45 ? C28 B5G 900 A 1 HETATM 7 C C1 B5G . . . E 2 -18.385 -10.464 40.359 1 105.34 ? C1 B5G 900 A 1 HETATM 8 C C2 B5G . . . E 2 -18.969 -9.272 40.595 1 104.73 ? C2 B5G 900 A 1 HETATM 9 C C3 B5G . . . E 2 -20.471 -9.129 40.859 1 103.91 ? C3 B5G 900 A 1 HETATM 10 N N5 B5G . . . E 2 -20.412 -11.72 41.031 1 103.71 ? N5 B5G 900 A 1 HETATM 11 C C9 B5G . . . E 2 -11.401 -5.627 39.78 1 104.75 ? C9 B5G 900 A 1 HETATM 12 C C11 B5G . . . E 2 -13.553 -6.643 40.246 1 102.91 ? C11 B5G 900 A 1 HETATM 13 C C12 B5G . . . E 2 -13.841 -5.594 41.135 1 102.46 ? C12 B5G 900 A 1 HETATM 14 C C27 B5G . . . E 2 -20.238 -12.065 42.456 1 104.1 ? C27 B5G 900 A 1 HETATM 15 C C7 B5G . . . E 2 -12.938 -4.557 41.328 1 103.36 ? C7 B5G 900 A 1 HETATM 16 C C8 B5G . . . E 2 -11.717 -4.588 40.653 1 104.6 ? C8 B5G 900 A 1 HETATM 17 C C13 B5G . . . E 2 -14.517 -7.76 40.097 1 102.79 ? C13 B5G 900 A 1 HETATM 18 O O14 B5G . . . E 2 -14.09 -8.852 39.774 1 102.29 ? O14 B5G 900 A 1 HETATM 19 C C15 B5G . . . E 2 -13.311 -3.447 42.295 1 102.94 ? C15 B5G 900 A 1 HETATM 20 N N16 B5G . . . E 2 -12.561 -2.182 42.146 1 103.8 ? N16 B5G 900 A 1 HETATM 21 C C17 B5G . . . E 2 -11.66 -2.047 43.313 1 105.5 ? C17 B5G 900 A 1 HETATM 22 C C18 B5G . . . E 2 -11.686 -3.392 44.078 1 105.07 ? C18 B5G 900 A 1 HETATM 23 C C19 B5G . . . E 2 -13.114 -3.901 43.757 1 103.07 ? C19 B5G 900 A 1 HETATM 24 O O21 B5G . . . E 2 -13.509 -1.429 40.27 1 102.73 ? O21 B5G 900 A 1 HETATM 25 N N22 B5G . . . E 2 -11.952 -0.114 41.241 1 103.73 ? N22 B5G 900 A 1 HETATM 26 N N23 B5G . . . E 2 -15.838 -7.556 40.356 1 103.76 ? N23 B5G 900 A 1 HETATM 27 N N25 B5G . . . E 2 -18.103 -8.262 40.583 1 104.94 ? N25 B5G 900 A 1 HETATM 28 S S26 B5G . . . E 2 -16.661 -10.207 40.131 1 107.33 ? S26 B5G 900 A 1 HETATM 29 C C29 B5G . . . E 2 -10.872 1.899 40.471 1 105.74 ? C29 B5G 900 A 1 HETATM 30 C C30 B5G . . . E 2 -10.849 3.057 39.676 1 106.35 ? C30 B5G 900 A 1 HETATM 31 C C31 B5G . . . E 2 -11.911 3.334 38.808 1 105.53 ? C31 B5G 900 A 1 HETATM 32 C C32 B5G . . . E 2 -12.989 2.465 38.743 1 104.6 ? C32 B5G 900 A 1 HETATM 33 C C33 B5G . . . E 2 -13.008 1.316 39.524 1 103.83 ? C33 B5G 900 A 1 HETATM 34 C C34 B5G . . . E 2 -9.752 3.969 39.752 1 109.9 ? C34 B5G 900 A 1 HETATM 35 N N35 B5G . . . E 2 -8.892 4.708 39.814 1 113.05 ? N35 B5G 900 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #