data_5WNL # _model_server_result.job_id tARSve9UpN7ZpnT0m-B4lg _model_server_result.datetime_utc '2024-12-06 05:16:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wnl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5WNL # _exptl.entry_id 5WNL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.531 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description STAUROSPORINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WNL _cell.length_a 70.158 _cell.length_b 109.563 _cell.length_c 146.221 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WNL _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 x,-y,-z-1/2 1 0 0 0 -1 0 0 0 -1 0 0 -73.1105 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H26 N4 O3' _chem_comp.formula_weight 466.531 _chem_comp.id STU _chem_comp.mon_nstd_flag . _chem_comp.name STAUROSPORINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C25 STU sing 290 n n O4 C21 STU sing 291 n n C25 C24 STU sing 292 n n C25 N3 STU sing 293 n n C25 H25 STU sing 294 n n C24 C23 STU sing 295 n n C24 H241 STU sing 296 n n C24 H242 STU sing 297 n n C23 C22 STU sing 298 n n C23 N4 STU sing 299 n n C23 H23 STU sing 300 n n C22 C21 STU sing 301 n n C22 O6 STU sing 302 n n C22 H22 STU sing 303 n n C21 C26 STU sing 304 n n C21 N2 STU sing 305 n n C26 H261 STU sing 306 n n C26 H262 STU sing 307 n n C26 H263 STU sing 308 n n N2 C18 STU sing 309 n y N2 C17 STU sing 310 n y C18 C19 STU doub 311 n y C18 C11 STU sing 312 n y C19 C6 STU sing 313 n y C19 N3 STU sing 314 n y C6 C7 STU doub 315 n y C6 C5 STU sing 316 n y C7 C10 STU sing 317 n y C7 C8 STU sing 318 n n C10 C11 STU doub 319 n y C10 C9 STU sing 320 n n C11 C12 STU sing 321 n y C12 C17 STU doub 322 n y C12 C13 STU sing 323 n y C17 C16 STU sing 324 n y C16 C15 STU doub 325 n y C16 H16 STU sing 326 n n C15 C14 STU sing 327 n y C15 H15 STU sing 328 n n C14 C13 STU doub 329 n y C14 H14 STU sing 330 n n C13 H13 STU sing 331 n n C9 N1 STU sing 332 n n C9 H91 STU sing 333 n n C9 H92 STU sing 334 n n N1 C8 STU sing 335 n n N1 HN1 STU sing 336 n n C8 O5 STU doub 337 n n C5 C20 STU doub 338 n y C5 C4 STU sing 339 n y C20 C1 STU sing 340 n y C20 N3 STU sing 341 n y C1 C2 STU doub 342 n y C1 H1 STU sing 343 n n C2 C3 STU sing 344 n y C2 H2 STU sing 345 n n C3 C4 STU doub 346 n y C3 H3 STU sing 347 n n C4 H4 STU sing 348 n n O6 C27 STU sing 349 n n C27 H271 STU sing 350 n n C27 H272 STU sing 351 n n C27 H273 STU sing 352 n n N4 C28 STU sing 353 n n N4 HN4 STU sing 354 n n C28 H281 STU sing 355 n n C28 H282 STU sing 356 n n C28 H283 STU sing 357 n n # _atom_sites.entry_id 5WNL _atom_sites.fract_transf_matrix[1][1] 0.014254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006839 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 STU A 1 401 1552 STU STU . C 3 CL A 1 402 1 CL CL . D 4 HOH A 1 501 48 HOH HOH . D 4 HOH A 2 502 38 HOH HOH . D 4 HOH A 3 503 32 HOH HOH . D 4 HOH A 4 504 36 HOH HOH . D 4 HOH A 5 505 28 HOH HOH . D 4 HOH A 6 506 26 HOH HOH . D 4 HOH A 7 507 15 HOH HOH . D 4 HOH A 8 508 33 HOH HOH . D 4 HOH A 9 509 5 HOH HOH . D 4 HOH A 10 510 6 HOH HOH . D 4 HOH A 11 511 21 HOH HOH . D 4 HOH A 12 512 7 HOH HOH . D 4 HOH A 13 513 37 HOH HOH . D 4 HOH A 14 514 47 HOH HOH . D 4 HOH A 15 515 17 HOH HOH . D 4 HOH A 16 516 27 HOH HOH . D 4 HOH A 17 517 49 HOH HOH . D 4 HOH A 18 518 45 HOH HOH . D 4 HOH A 19 519 42 HOH HOH . D 4 HOH A 20 520 1 HOH HOH . D 4 HOH A 21 521 39 HOH HOH . D 4 HOH A 22 522 41 HOH HOH . D 4 HOH A 23 523 12 HOH HOH . D 4 HOH A 24 524 29 HOH HOH . D 4 HOH A 25 525 46 HOH HOH . D 4 HOH A 26 526 44 HOH HOH . D 4 HOH A 27 527 20 HOH HOH . D 4 HOH A 28 528 14 HOH HOH . D 4 HOH A 29 529 18 HOH HOH . D 4 HOH A 30 530 13 HOH HOH . D 4 HOH A 31 531 2 HOH HOH . D 4 HOH A 32 532 16 HOH HOH . D 4 HOH A 33 533 19 HOH HOH . D 4 HOH A 34 534 9 HOH HOH . D 4 HOH A 35 535 55 HOH HOH . D 4 HOH A 36 536 52 HOH HOH . D 4 HOH A 37 537 31 HOH HOH . D 4 HOH A 38 538 35 HOH HOH . D 4 HOH A 39 539 8 HOH HOH . D 4 HOH A 40 540 23 HOH HOH . D 4 HOH A 41 541 22 HOH HOH . D 4 HOH A 42 542 51 HOH HOH . D 4 HOH A 43 543 25 HOH HOH . D 4 HOH A 44 544 50 HOH HOH . D 4 HOH A 45 545 11 HOH HOH . D 4 HOH A 46 546 34 HOH HOH . D 4 HOH A 47 547 53 HOH HOH . D 4 HOH A 48 548 40 HOH HOH . D 4 HOH A 49 549 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 STU . . . B 2 -13.513 -3.292 -17.515 1 49.84 ? O4 STU 401 A 1 HETATM 2 C C25 STU . . . B 2 -12.179 -3.205 -18.047 1 51.17 ? C25 STU 401 A 1 HETATM 3 C C24 STU . . . B 2 -11.446 -1.895 -17.754 1 53.16 ? C24 STU 401 A 1 HETATM 4 C C23 STU . . . B 2 -12.338 -0.967 -16.937 1 53.72 ? C23 STU 401 A 1 HETATM 5 C C22 STU . . . B 2 -13.676 -0.831 -17.649 1 53.37 ? C22 STU 401 A 1 HETATM 6 C C21 STU . . . B 2 -14.417 -2.184 -17.593 1 54.21 ? C21 STU 401 A 1 HETATM 7 C C26 STU . . . B 2 -15.25 -2.292 -16.31 1 54.84 ? C26 STU 401 A 1 HETATM 8 N N2 STU . . . B 2 -15.223 -2.314 -18.851 1 51.94 ? N2 STU 401 A 1 HETATM 9 C C18 STU . . . B 2 -14.682 -2.828 -20 1 50.96 ? C18 STU 401 A 1 HETATM 10 C C19 STU . . . B 2 -13.337 -3.408 -20.299 1 50.05 ? C19 STU 401 A 1 HETATM 11 C C6 STU . . . B 2 -13.036 -3.908 -21.641 1 49.6 ? C6 STU 401 A 1 HETATM 12 C C7 STU . . . B 2 -14.104 -3.819 -22.659 1 51.25 ? C7 STU 401 A 1 HETATM 13 C C10 STU . . . B 2 -15.422 -3.252 -22.413 1 51.79 ? C10 STU 401 A 1 HETATM 14 C C11 STU . . . B 2 -15.707 -2.745 -21.048 1 53.05 ? C11 STU 401 A 1 HETATM 15 C C12 STU . . . B 2 -16.868 -2.129 -20.43 1 52.68 ? C12 STU 401 A 1 HETATM 16 C C17 STU . . . B 2 -16.522 -1.841 -19.005 1 51.69 ? C17 STU 401 A 1 HETATM 17 C C16 STU . . . B 2 -17.531 -1.24 -18.246 1 51.68 ? C16 STU 401 A 1 HETATM 18 C C15 STU . . . B 2 -18.773 -0.945 -18.835 1 53.67 ? C15 STU 401 A 1 HETATM 19 C C14 STU . . . B 2 -19.058 -1.234 -20.182 1 52.99 ? C14 STU 401 A 1 HETATM 20 C C13 STU . . . B 2 -18.096 -1.832 -20.994 1 52.61 ? C13 STU 401 A 1 HETATM 21 C C9 STU . . . B 2 -16.237 -3.288 -23.601 1 51.52 ? C9 STU 401 A 1 HETATM 22 N N1 STU . . . B 2 -15.338 -3.904 -24.614 1 51.66 ? N1 STU 401 A 1 HETATM 23 C C8 STU . . . B 2 -14.135 -4.207 -24.081 1 52.81 ? C8 STU 401 A 1 HETATM 24 O O5 STU . . . B 2 -13.166 -4.748 -24.73 1 54.04 ? O5 STU 401 A 1 HETATM 25 C C5 STU . . . B 2 -11.674 -4.389 -21.582 1 48.91 ? C5 STU 401 A 1 HETATM 26 C C20 STU . . . B 2 -11.227 -4.148 -20.188 1 49.92 ? C20 STU 401 A 1 HETATM 27 C C1 STU . . . B 2 -9.926 -4.534 -19.872 1 51.87 ? C1 STU 401 A 1 HETATM 28 C C2 STU . . . B 2 -9.112 -5.125 -20.85 1 49.98 ? C2 STU 401 A 1 HETATM 29 C C3 STU . . . B 2 -9.57 -5.339 -22.164 1 50.62 ? C3 STU 401 A 1 HETATM 30 C C4 STU . . . B 2 -10.863 -4.976 -22.542 1 49.52 ? C4 STU 401 A 1 HETATM 31 N N3 STU . . . B 2 -12.256 -3.547 -19.484 1 50.85 ? N3 STU 401 A 1 HETATM 32 O O6 STU . . . B 2 -13.405 -0.421 -19.002 1 53.35 ? O6 STU 401 A 1 HETATM 33 C C27 STU . . . B 2 -14.3 0.522 -19.609 1 55.16 ? C27 STU 401 A 1 HETATM 34 N N4 STU . . . B 2 -11.711 0.318 -16.73 1 54.41 ? N4 STU 401 A 1 HETATM 35 C C28 STU . . . B 2 -10.492 0.434 -15.953 1 54.9 ? C28 STU 401 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 35 #