data_5WOL # _model_server_result.job_id GiEbcCi8hqlPJBVOYi2YbA _model_server_result.datetime_utc '2024-11-05 00:36:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wol # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 5WOL # _exptl.entry_id 5WOL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 634.751 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WOL _cell.length_a 73.605 _cell.length_b 78.795 _cell.length_c 84.074 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WOL _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H58 O15' _chem_comp.formula_weight 634.751 _chem_comp.id PE3 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O43 C42 PE3 sing 331 n n O43 H43 PE3 sing 332 n n C42 C41 PE3 sing 333 n n C42 H421 PE3 sing 334 n n C42 H422 PE3 sing 335 n n C41 O40 PE3 sing 336 n n C41 H411 PE3 sing 337 n n C41 H412 PE3 sing 338 n n O40 C39 PE3 sing 339 n n C39 C38 PE3 sing 340 n n C39 H391 PE3 sing 341 n n C39 H392 PE3 sing 342 n n C38 O37 PE3 sing 343 n n C38 H381 PE3 sing 344 n n C38 H382 PE3 sing 345 n n O37 C36 PE3 sing 346 n n C36 C35 PE3 sing 347 n n C36 H361 PE3 sing 348 n n C36 H362 PE3 sing 349 n n C35 O34 PE3 sing 350 n n C35 H351 PE3 sing 351 n n C35 H352 PE3 sing 352 n n O34 C33 PE3 sing 353 n n C33 C32 PE3 sing 354 n n C33 H331 PE3 sing 355 n n C33 H332 PE3 sing 356 n n C32 O31 PE3 sing 357 n n C32 H321 PE3 sing 358 n n C32 H322 PE3 sing 359 n n O31 C30 PE3 sing 360 n n C30 C29 PE3 sing 361 n n C30 H301 PE3 sing 362 n n C30 H302 PE3 sing 363 n n C29 O28 PE3 sing 364 n n C29 H291 PE3 sing 365 n n C29 H292 PE3 sing 366 n n O28 C27 PE3 sing 367 n n C27 C26 PE3 sing 368 n n C27 H271 PE3 sing 369 n n C27 H272 PE3 sing 370 n n C26 O25 PE3 sing 371 n n C26 H261 PE3 sing 372 n n C26 H262 PE3 sing 373 n n O25 C24 PE3 sing 374 n n C24 C23 PE3 sing 375 n n C24 H241 PE3 sing 376 n n C24 H242 PE3 sing 377 n n C23 O22 PE3 sing 378 n n C23 H231 PE3 sing 379 n n C23 H232 PE3 sing 380 n n O22 C21 PE3 sing 381 n n C21 C20 PE3 sing 382 n n C21 H211 PE3 sing 383 n n C21 H212 PE3 sing 384 n n C20 O19 PE3 sing 385 n n C20 H201 PE3 sing 386 n n C20 H202 PE3 sing 387 n n O19 C18 PE3 sing 388 n n C18 C17 PE3 sing 389 n n C18 H181 PE3 sing 390 n n C18 H182 PE3 sing 391 n n C17 O16 PE3 sing 392 n n C17 H171 PE3 sing 393 n n C17 H172 PE3 sing 394 n n O16 C15 PE3 sing 395 n n C15 C14 PE3 sing 396 n n C15 H151 PE3 sing 397 n n C15 H152 PE3 sing 398 n n C14 O13 PE3 sing 399 n n C14 H141 PE3 sing 400 n n C14 H142 PE3 sing 401 n n O13 C12 PE3 sing 402 n n C12 C11 PE3 sing 403 n n C12 H121 PE3 sing 404 n n C12 H122 PE3 sing 405 n n C11 O10 PE3 sing 406 n n C11 H111 PE3 sing 407 n n C11 H112 PE3 sing 408 n n O10 C9 PE3 sing 409 n n C9 C8 PE3 sing 410 n n C9 H91 PE3 sing 411 n n C9 H92 PE3 sing 412 n n C8 O7 PE3 sing 413 n n C8 H81 PE3 sing 414 n n C8 H82 PE3 sing 415 n n O7 C6 PE3 sing 416 n n C6 C5 PE3 sing 417 n n C6 H61 PE3 sing 418 n n C6 H62 PE3 sing 419 n n C5 O4 PE3 sing 420 n n C5 H51 PE3 sing 421 n n C5 H52 PE3 sing 422 n n O4 C3 PE3 sing 423 n n C3 C2 PE3 sing 424 n n C3 H31 PE3 sing 425 n n C3 H32 PE3 sing 426 n n C2 O1 PE3 sing 427 n n C2 H21 PE3 sing 428 n n C2 H22 PE3 sing 429 n n O1 HO1 PE3 sing 430 n n # _atom_sites.entry_id 5WOL _atom_sites.fract_transf_matrix[1][1] 0.013586 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 301 1 NAP NAP . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 4 6PC A 1 304 3 6PC 6PC . F 4 6PC A 1 305 4 6PC 6PC . G 5 PE3 A 1 306 6060 PE3 PE3 . H 6 HOH A 1 401 171 HOH HOH . H 6 HOH A 2 402 106 HOH HOH . H 6 HOH A 3 403 70 HOH HOH . H 6 HOH A 4 404 54 HOH HOH . H 6 HOH A 5 405 211 HOH HOH . H 6 HOH A 6 406 61 HOH HOH . H 6 HOH A 7 407 186 HOH HOH . H 6 HOH A 8 408 108 HOH HOH . H 6 HOH A 9 409 85 HOH HOH . H 6 HOH A 10 410 275 HOH HOH . H 6 HOH A 11 411 101 HOH HOH . H 6 HOH A 12 412 77 HOH HOH . H 6 HOH A 13 413 83 HOH HOH . H 6 HOH A 14 414 224 HOH HOH . H 6 HOH A 15 415 79 HOH HOH . H 6 HOH A 16 416 91 HOH HOH . H 6 HOH A 17 417 210 HOH HOH . H 6 HOH A 18 418 140 HOH HOH . H 6 HOH A 19 419 43 HOH HOH . H 6 HOH A 20 420 53 HOH HOH . H 6 HOH A 21 421 33 HOH HOH . H 6 HOH A 22 422 51 HOH HOH . H 6 HOH A 23 423 278 HOH HOH . H 6 HOH A 24 424 127 HOH HOH . H 6 HOH A 25 425 76 HOH HOH . H 6 HOH A 26 426 103 HOH HOH . H 6 HOH A 27 427 35 HOH HOH . H 6 HOH A 28 428 237 HOH HOH . H 6 HOH A 29 429 274 HOH HOH . H 6 HOH A 30 430 1 HOH HOH . H 6 HOH A 31 431 121 HOH HOH . H 6 HOH A 32 432 26 HOH HOH . H 6 HOH A 33 433 109 HOH HOH . H 6 HOH A 34 434 212 HOH HOH . H 6 HOH A 35 435 46 HOH HOH . H 6 HOH A 36 436 162 HOH HOH . H 6 HOH A 37 437 4 HOH HOH . H 6 HOH A 38 438 128 HOH HOH . H 6 HOH A 39 439 112 HOH HOH . H 6 HOH A 40 440 6 HOH HOH . H 6 HOH A 41 441 18 HOH HOH . H 6 HOH A 42 442 105 HOH HOH . H 6 HOH A 43 443 80 HOH HOH . H 6 HOH A 44 444 114 HOH HOH . H 6 HOH A 45 445 3 HOH HOH . H 6 HOH A 46 446 73 HOH HOH . H 6 HOH A 47 447 57 HOH HOH . H 6 HOH A 48 448 34 HOH HOH . H 6 HOH A 49 449 146 HOH HOH . H 6 HOH A 50 450 40 HOH HOH . H 6 HOH A 51 451 65 HOH HOH . H 6 HOH A 52 452 59 HOH HOH . H 6 HOH A 53 453 118 HOH HOH . H 6 HOH A 54 454 29 HOH HOH . H 6 HOH A 55 455 205 HOH HOH . H 6 HOH A 56 456 48 HOH HOH . H 6 HOH A 57 457 20 HOH HOH . H 6 HOH A 58 458 132 HOH HOH . H 6 HOH A 59 459 37 HOH HOH . H 6 HOH A 60 460 135 HOH HOH . H 6 HOH A 61 461 17 HOH HOH . H 6 HOH A 62 462 257 HOH HOH . H 6 HOH A 63 463 39 HOH HOH . H 6 HOH A 64 464 232 HOH HOH . H 6 HOH A 65 465 180 HOH HOH . H 6 HOH A 66 466 74 HOH HOH . H 6 HOH A 67 467 2 HOH HOH . H 6 HOH A 68 468 160 HOH HOH . H 6 HOH A 69 469 63 HOH HOH . H 6 HOH A 70 470 188 HOH HOH . H 6 HOH A 71 471 145 HOH HOH . H 6 HOH A 72 472 41 HOH HOH . H 6 HOH A 73 473 14 HOH HOH . H 6 HOH A 74 474 100 HOH HOH . H 6 HOH A 75 475 75 HOH HOH . H 6 HOH A 76 476 147 HOH HOH . H 6 HOH A 77 477 7 HOH HOH . H 6 HOH A 78 478 266 HOH HOH . H 6 HOH A 79 479 94 HOH HOH . H 6 HOH A 80 480 25 HOH HOH . H 6 HOH A 81 481 12 HOH HOH . H 6 HOH A 82 482 98 HOH HOH . H 6 HOH A 83 483 30 HOH HOH . H 6 HOH A 84 484 10 HOH HOH . H 6 HOH A 85 485 19 HOH HOH . H 6 HOH A 86 486 36 HOH HOH . H 6 HOH A 87 487 117 HOH HOH . H 6 HOH A 88 488 185 HOH HOH . H 6 HOH A 89 489 168 HOH HOH . H 6 HOH A 90 490 67 HOH HOH . H 6 HOH A 91 491 111 HOH HOH . H 6 HOH A 92 492 250 HOH HOH . H 6 HOH A 93 493 38 HOH HOH . H 6 HOH A 94 494 219 HOH HOH . H 6 HOH A 95 495 141 HOH HOH . H 6 HOH A 96 496 249 HOH HOH . H 6 HOH A 97 497 93 HOH HOH . H 6 HOH A 98 498 131 HOH HOH . H 6 HOH A 99 499 13 HOH HOH . H 6 HOH A 100 500 60 HOH HOH . H 6 HOH A 101 501 102 HOH HOH . H 6 HOH A 102 502 95 HOH HOH . H 6 HOH A 103 503 190 HOH HOH . H 6 HOH A 104 504 68 HOH HOH . H 6 HOH A 105 505 11 HOH HOH . H 6 HOH A 106 506 90 HOH HOH . H 6 HOH A 107 507 31 HOH HOH . H 6 HOH A 108 508 197 HOH HOH . H 6 HOH A 109 509 194 HOH HOH . H 6 HOH A 110 510 9 HOH HOH . H 6 HOH A 111 511 27 HOH HOH . H 6 HOH A 112 512 104 HOH HOH . H 6 HOH A 113 513 178 HOH HOH . H 6 HOH A 114 514 238 HOH HOH . H 6 HOH A 115 515 270 HOH HOH . H 6 HOH A 116 516 71 HOH HOH . H 6 HOH A 117 517 96 HOH HOH . H 6 HOH A 118 518 149 HOH HOH . H 6 HOH A 119 519 181 HOH HOH . H 6 HOH A 120 520 255 HOH HOH . H 6 HOH A 121 521 32 HOH HOH . H 6 HOH A 122 522 155 HOH HOH . H 6 HOH A 123 523 62 HOH HOH . H 6 HOH A 124 524 84 HOH HOH . H 6 HOH A 125 525 167 HOH HOH . H 6 HOH A 126 526 45 HOH HOH . H 6 HOH A 127 527 265 HOH HOH . H 6 HOH A 128 528 204 HOH HOH . H 6 HOH A 129 529 143 HOH HOH . H 6 HOH A 130 530 82 HOH HOH . H 6 HOH A 131 531 86 HOH HOH . H 6 HOH A 132 532 88 HOH HOH . H 6 HOH A 133 533 124 HOH HOH . H 6 HOH A 134 534 280 HOH HOH . H 6 HOH A 135 535 154 HOH HOH . H 6 HOH A 136 536 227 HOH HOH . H 6 HOH A 137 537 119 HOH HOH . H 6 HOH A 138 538 183 HOH HOH . H 6 HOH A 139 539 258 HOH HOH . H 6 HOH A 140 540 78 HOH HOH . H 6 HOH A 141 541 216 HOH HOH . H 6 HOH A 142 542 182 HOH HOH . H 6 HOH A 143 543 209 HOH HOH . H 6 HOH A 144 544 133 HOH HOH . H 6 HOH A 145 545 202 HOH HOH . H 6 HOH A 146 546 134 HOH HOH . H 6 HOH A 147 547 123 HOH HOH . H 6 HOH A 148 548 213 HOH HOH . H 6 HOH A 149 549 273 HOH HOH . H 6 HOH A 150 550 5 HOH HOH . H 6 HOH A 151 551 116 HOH HOH . H 6 HOH A 152 552 170 HOH HOH . H 6 HOH A 153 553 276 HOH HOH . H 6 HOH A 154 554 187 HOH HOH . H 6 HOH A 155 555 139 HOH HOH . H 6 HOH A 156 556 196 HOH HOH . H 6 HOH A 157 557 173 HOH HOH . H 6 HOH A 158 558 229 HOH HOH . H 6 HOH A 159 559 115 HOH HOH . H 6 HOH A 160 560 176 HOH HOH . H 6 HOH A 161 561 240 HOH HOH . H 6 HOH A 162 562 195 HOH HOH . H 6 HOH A 163 563 259 HOH HOH . H 6 HOH A 164 564 55 HOH HOH . H 6 HOH A 165 565 21 HOH HOH . H 6 HOH A 166 566 233 HOH HOH . H 6 HOH A 167 567 277 HOH HOH . H 6 HOH A 168 568 172 HOH HOH . H 6 HOH A 169 569 226 HOH HOH . H 6 HOH A 170 570 198 HOH HOH . H 6 HOH A 171 571 248 HOH HOH . H 6 HOH A 172 572 107 HOH HOH . H 6 HOH A 173 573 252 HOH HOH . H 6 HOH A 174 574 15 HOH HOH . H 6 HOH A 175 575 222 HOH HOH . H 6 HOH A 176 576 69 HOH HOH . H 6 HOH A 177 577 193 HOH HOH . H 6 HOH A 178 578 126 HOH HOH . H 6 HOH A 179 579 200 HOH HOH . H 6 HOH A 180 580 199 HOH HOH . H 6 HOH A 181 581 184 HOH HOH . H 6 HOH A 182 582 44 HOH HOH . H 6 HOH A 183 583 50 HOH HOH . H 6 HOH A 184 584 125 HOH HOH . H 6 HOH A 185 585 239 HOH HOH . H 6 HOH A 186 586 56 HOH HOH . H 6 HOH A 187 587 217 HOH HOH . H 6 HOH A 188 588 120 HOH HOH . H 6 HOH A 189 589 256 HOH HOH . H 6 HOH A 190 590 164 HOH HOH . H 6 HOH A 191 591 253 HOH HOH . H 6 HOH A 192 592 214 HOH HOH . H 6 HOH A 193 593 16 HOH HOH . H 6 HOH A 194 594 81 HOH HOH . H 6 HOH A 195 595 243 HOH HOH . H 6 HOH A 196 596 242 HOH HOH . H 6 HOH A 197 597 156 HOH HOH . H 6 HOH A 198 598 179 HOH HOH . H 6 HOH A 199 599 269 HOH HOH . H 6 HOH A 200 600 161 HOH HOH . H 6 HOH A 201 601 87 HOH HOH . H 6 HOH A 202 602 279 HOH HOH . H 6 HOH A 203 603 148 HOH HOH . H 6 HOH A 204 604 150 HOH HOH . H 6 HOH A 205 605 64 HOH HOH . H 6 HOH A 206 606 192 HOH HOH . H 6 HOH A 207 607 130 HOH HOH . H 6 HOH A 208 608 223 HOH HOH . H 6 HOH A 209 609 52 HOH HOH . H 6 HOH A 210 610 28 HOH HOH . H 6 HOH A 211 611 267 HOH HOH . H 6 HOH A 212 612 8 HOH HOH . H 6 HOH A 213 613 153 HOH HOH . H 6 HOH A 214 614 271 HOH HOH . H 6 HOH A 215 615 218 HOH HOH . H 6 HOH A 216 616 113 HOH HOH . H 6 HOH A 217 617 97 HOH HOH . H 6 HOH A 218 618 66 HOH HOH . H 6 HOH A 219 619 272 HOH HOH . H 6 HOH A 220 620 157 HOH HOH . H 6 HOH A 221 621 177 HOH HOH . H 6 HOH A 222 622 241 HOH HOH . H 6 HOH A 223 623 207 HOH HOH . H 6 HOH A 224 624 189 HOH HOH . H 6 HOH A 225 625 244 HOH HOH . H 6 HOH A 226 626 234 HOH HOH . H 6 HOH A 227 627 264 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O34 PE3 . . . G 5 0.577 1.102 34.119 1 16.47 ? O34 PE3 306 A 1 HETATM 2 C C33 PE3 . . . G 5 1.039 2.498 33.967 1 14.29 ? C33 PE3 306 A 1 HETATM 3 C C32 PE3 . . . G 5 2.212 2.787 34.895 1 7.53 ? C32 PE3 306 A 1 HETATM 4 O O31 PE3 . . . G 5 1.832 2.693 36.264 1 12.04 ? O31 PE3 306 A 1 HETATM 5 C C30 PE3 . . . G 5 2.954 2.804 37.101 1 16.07 ? C30 PE3 306 A 1 HETATM 6 C C29 PE3 . . . G 5 2.526 2.378 38.458 1 21.36 ? C29 PE3 306 A 1 HETATM 7 O O28 PE3 . . . G 5 1.5 3.144 38.982 1 26.3 ? O28 PE3 306 A 1 HETATM 8 C C27 PE3 . . . G 5 1.912 4.508 39.04 1 29.95 ? C27 PE3 306 A 1 HETATM 9 C C26 PE3 . . . G 5 0.883 5.439 39.669 1 32.87 ? C26 PE3 306 A 1 HETATM 10 O O25 PE3 . . . G 5 0.635 5.046 41.012 1 35.21 ? O25 PE3 306 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #