data_5WP6
#
_model_server_result.job_id            R_yfmmVbzBWB6loUMnhLUA 
_model_server_result.datetime_utc      '2024-11-05 15:23:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wp6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2002}' 
#
_entry.id    5WP6 
#
_exptl.entry_id    5WP6 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              957.398 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DECAVANADATE 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5WP6 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5WP6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'O28 V10 -6' 
_chem_comp.formula_weight    957.398 
_chem_comp.id                DVT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DECAVANADATE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O28 V10 DVT doub 83 n n 
V10 O18 DVT sing 84 n n 
V10 O15 DVT sing 85 n n 
V10 O27 DVT sing 86 n n 
V10 O2 DVT sing 87 n n 
V10 O23 DVT sing 88 n n 
O18 V3 DVT sing 89 n n 
O15 V1 DVT sing 90 n n 
V1 O5 DVT doub 91 n n 
V1 O2 DVT sing 92 n n 
V1 O4 DVT sing 93 n n 
V1 O1 DVT sing 94 n n 
V1 O3 DVT sing 95 n n 
O27 V9 DVT sing 96 n n 
V9 O2 DVT sing 97 n n 
V9 O4 DVT sing 98 n n 
V9 O8 DVT sing 99 n n 
V9 O26 DVT doub 100 n n 
V9 O24 DVT sing 101 n n 
O2 V8 DVT sing 102 n n 
O2 V2 DVT sing 103 n n 
O2 V3 DVT sing 104 n n 
O8 V7 DVT sing 105 n n 
O8 V2 DVT sing 106 n n 
O24 V7 DVT sing 107 n n 
O24 V8 DVT sing 108 n n 
V7 O11 DVT sing 109 n n 
V7 O25 DVT doub 110 n n 
V7 O21 DVT sing 111 n n 
V7 O16 DVT sing 112 n n 
O11 V5 DVT sing 113 n n 
O21 V6 DVT sing 114 n n 
V6 O19 DVT sing 115 n n 
V6 O22 DVT doub 116 n n 
V6 O6 DVT sing 117 n n 
V6 O20 DVT sing 118 n n 
V6 O16 DVT sing 119 n n 
O19 V4 DVT sing 120 n n 
O6 V5 DVT sing 121 n n 
V8 O20 DVT sing 122 n n 
V8 O23 DVT sing 123 n n 
V8 O16 DVT sing 124 n n 
V8 O17 DVT sing 125 n n 
O7 V5 DVT sing 126 n n 
O7 V2 DVT sing 127 n n 
V5 O14 DVT doub 128 n n 
V5 O16 DVT sing 129 n n 
V5 O13 DVT sing 130 n n 
O16 V2 DVT sing 131 n n 
O16 V4 DVT sing 132 n n 
V2 O1 DVT sing 133 n n 
V2 O9 DVT sing 134 n n 
O17 V4 DVT sing 135 n n 
O17 V3 DVT sing 136 n n 
V4 O13 DVT sing 137 n n 
V4 O12 DVT doub 138 n n 
V4 O9 DVT sing 139 n n 
O9 V3 DVT sing 140 n n 
V3 O3 DVT sing 141 n n 
V3 O10 DVT doub 142 n n 
#
_atom_sites.entry_id                     5WP6 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 DVT A 1 2001 2001 DVT DVT . 
F 2 DVT A 1 2002 2002 DVT DVT . 
G 2 DVT B 1 2001 2001 DVT DVT . 
H 2 DVT B 1 2002 2002 DVT DVT . 
I 2 DVT C 1 2001 2001 DVT DVT . 
J 2 DVT C 1 2002 2002 DVT DVT . 
K 2 DVT D 1 2001 2001 DVT DVT . 
L 2 DVT D 1 2002 2002 DVT DVT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O28 DVT . . . F 2 202.619 214.952 287.827 1 20 ? O28 DVT 2002 A 1 
HETATM 2 V V10 DVT . . . F 2 203.87 213.96 288.012 1 20 ? V10 DVT 2002 A 1 
HETATM 3 O O18 DVT . . . F 2 203.554 213.228 289.769 1 20 ? O18 DVT 2002 A 1 
HETATM 4 O O15 DVT . . . F 2 203.483 212.469 286.984 1 20 ? O15 DVT 2002 A 1 
HETATM 5 V V1 DVT . . . F 2 204.811 211.124 286.943 1 20 ? V1 DVT 2002 A 1 
HETATM 6 O O5 DVT . . . F 2 204.243 209.992 285.973 1 20 ? O5 DVT 2002 A 1 
HETATM 7 O O27 DVT . . . F 2 205.132 214.739 286.805 1 20 ? O27 DVT 2002 A 1 
HETATM 8 V V9 DVT . . . F 2 206.589 213.633 286.475 1 20 ? V9 DVT 2002 A 1 
HETATM 9 O O2 DVT . . . F 2 205.756 212.753 288.323 1 20 ? O2 DVT 2002 A 1 
HETATM 10 O O4 DVT . . . F 2 206.08 212.002 285.818 1 20 ? O4 DVT 2002 A 1 
HETATM 11 O O8 DVT . . . F 2 208.142 212.503 287.075 1 20 ? O8 DVT 2002 A 1 
HETATM 12 O O26 DVT . . . F 2 207.238 214.283 285.161 1 20 ? O26 DVT 2002 A 1 
HETATM 13 O O24 DVT . . . F 2 207.443 214.789 287.883 1 20 ? O24 DVT 2002 A 1 
HETATM 14 V V7 DVT . . . F 2 209.281 213.925 288.008 1 20 ? V7 DVT 2002 A 1 
HETATM 15 O O11 DVT . . . F 2 210.403 212.54 288.344 1 20 ? O11 DVT 2002 A 1 
HETATM 16 O O25 DVT . . . F 2 209.977 214.535 286.695 1 20 ? O25 DVT 2002 A 1 
HETATM 17 O O21 DVT . . . F 2 209.486 215.24 289.246 1 20 ? O21 DVT 2002 A 1 
HETATM 18 V V6 DVT . . . F 2 209.121 214.642 291.025 1 20 ? V6 DVT 2002 A 1 
HETATM 19 O O19 DVT . . . F 2 207.91 213.746 292.225 1 20 ? O19 DVT 2002 A 1 
HETATM 20 O O22 DVT . . . F 2 209.732 215.818 291.925 1 20 ? O22 DVT 2002 A 1 
HETATM 21 O O6 DVT . . . F 2 210.416 213.291 291.046 1 20 ? O6 DVT 2002 A 1 
HETATM 22 V V8 DVT . . . F 2 206.495 214.292 289.498 1 20 ? V8 DVT 2002 A 1 
HETATM 23 O O20 DVT . . . F 2 207.298 215.405 290.509 1 20 ? O20 DVT 2002 A 1 
HETATM 24 O O23 DVT . . . F 2 205.074 215.155 289.195 1 20 ? O23 DVT 2002 A 1 
HETATM 25 O O16 DVT . . . F 2 208.82 210.619 288.824 1 20 ? O16 DVT 2002 A 1 
HETATM 26 V V5 DVT . . . F 2 210.008 211.802 290.045 1 20 ? V5 DVT 2002 A 1 
HETATM 27 O O14 DVT . . . F 2 211.253 210.795 290.293 1 20 ? O14 DVT 2002 A 1 
HETATM 28 O O7 DVT . . . F 2 208.134 213.02 289.684 1 20 ? O7 DVT 2002 A 1 
HETATM 29 V V2 DVT . . . F 2 207.403 211.471 288.513 1 20 ? V2 DVT 2002 A 1 
HETATM 30 O O1 DVT . . . F 2 206.583 210.332 287.526 1 20 ? O1 DVT 2002 A 1 
HETATM 31 O O17 DVT . . . F 2 205.766 213.219 290.929 1 20 ? O17 DVT 2002 A 1 
HETATM 32 V V4 DVT . . . F 2 207.339 212.123 291.569 1 20 ? V4 DVT 2002 A 1 
HETATM 33 O O13 DVT . . . F 2 208.745 210.989 291.217 1 20 ? O13 DVT 2002 A 1 
HETATM 34 O O12 DVT . . . F 2 206.666 211.452 292.901 1 20 ? O12 DVT 2002 A 1 
HETATM 35 O O9 DVT . . . F 2 206.485 210.97 290.146 1 20 ? O9 DVT 2002 A 1 
HETATM 36 V V3 DVT . . . F 2 204.652 211.779 289.978 1 20 ? V3 DVT 2002 A 1 
HETATM 37 O O3 DVT . . . F 2 204.44 210.477 288.716 1 20 ? O3 DVT 2002 A 1 
HETATM 38 O O10 DVT . . . F 2 203.924 211.123 291.267 1 20 ? O10 DVT 2002 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           38 
#