data_5WP6 # _model_server_result.job_id HhyC80bTo-ZUJplGeR2sJA _model_server_result.datetime_utc '2024-11-05 15:36:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wp6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2002}' # _entry.id 5WP6 # _exptl.entry_id 5WP6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 957.398 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECAVANADATE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WP6 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WP6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'O28 V10 -6' _chem_comp.formula_weight 957.398 _chem_comp.id DVT _chem_comp.mon_nstd_flag . _chem_comp.name DECAVANADATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O28 V10 DVT doub 83 n n V10 O18 DVT sing 84 n n V10 O15 DVT sing 85 n n V10 O27 DVT sing 86 n n V10 O2 DVT sing 87 n n V10 O23 DVT sing 88 n n O18 V3 DVT sing 89 n n O15 V1 DVT sing 90 n n V1 O5 DVT doub 91 n n V1 O2 DVT sing 92 n n V1 O4 DVT sing 93 n n V1 O1 DVT sing 94 n n V1 O3 DVT sing 95 n n O27 V9 DVT sing 96 n n V9 O2 DVT sing 97 n n V9 O4 DVT sing 98 n n V9 O8 DVT sing 99 n n V9 O26 DVT doub 100 n n V9 O24 DVT sing 101 n n O2 V8 DVT sing 102 n n O2 V2 DVT sing 103 n n O2 V3 DVT sing 104 n n O8 V7 DVT sing 105 n n O8 V2 DVT sing 106 n n O24 V7 DVT sing 107 n n O24 V8 DVT sing 108 n n V7 O11 DVT sing 109 n n V7 O25 DVT doub 110 n n V7 O21 DVT sing 111 n n V7 O16 DVT sing 112 n n O11 V5 DVT sing 113 n n O21 V6 DVT sing 114 n n V6 O19 DVT sing 115 n n V6 O22 DVT doub 116 n n V6 O6 DVT sing 117 n n V6 O20 DVT sing 118 n n V6 O16 DVT sing 119 n n O19 V4 DVT sing 120 n n O6 V5 DVT sing 121 n n V8 O20 DVT sing 122 n n V8 O23 DVT sing 123 n n V8 O16 DVT sing 124 n n V8 O17 DVT sing 125 n n O7 V5 DVT sing 126 n n O7 V2 DVT sing 127 n n V5 O14 DVT doub 128 n n V5 O16 DVT sing 129 n n V5 O13 DVT sing 130 n n O16 V2 DVT sing 131 n n O16 V4 DVT sing 132 n n V2 O1 DVT sing 133 n n V2 O9 DVT sing 134 n n O17 V4 DVT sing 135 n n O17 V3 DVT sing 136 n n V4 O13 DVT sing 137 n n V4 O12 DVT doub 138 n n V4 O9 DVT sing 139 n n O9 V3 DVT sing 140 n n V3 O3 DVT sing 141 n n V3 O10 DVT doub 142 n n # _atom_sites.entry_id 5WP6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 DVT A 1 2001 2001 DVT DVT . F 2 DVT A 1 2002 2002 DVT DVT . G 2 DVT B 1 2001 2001 DVT DVT . H 2 DVT B 1 2002 2002 DVT DVT . I 2 DVT C 1 2001 2001 DVT DVT . J 2 DVT C 1 2002 2002 DVT DVT . K 2 DVT D 1 2001 2001 DVT DVT . L 2 DVT D 1 2002 2002 DVT DVT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O28 DVT . . . J 2 284.802 272.481 287.842 1 20 ? O28 DVT 2002 C 1 HETATM 2 V V10 DVT . . . J 2 283.551 273.474 288.027 1 20 ? V10 DVT 2002 C 1 HETATM 3 O O18 DVT . . . J 2 283.868 274.206 289.783 1 20 ? O18 DVT 2002 C 1 HETATM 4 O O15 DVT . . . J 2 283.939 274.964 286.998 1 20 ? O15 DVT 2002 C 1 HETATM 5 V V1 DVT . . . J 2 282.612 276.31 286.956 1 20 ? V1 DVT 2002 C 1 HETATM 6 O O5 DVT . . . J 2 283.181 277.441 285.986 1 20 ? O5 DVT 2002 C 1 HETATM 7 O O27 DVT . . . J 2 282.289 272.695 286.82 1 20 ? O27 DVT 2002 C 1 HETATM 8 V V9 DVT . . . J 2 280.833 273.802 286.489 1 20 ? V9 DVT 2002 C 1 HETATM 9 O O2 DVT . . . J 2 281.666 274.682 288.337 1 20 ? O2 DVT 2002 C 1 HETATM 10 O O4 DVT . . . J 2 281.343 275.432 285.832 1 20 ? O4 DVT 2002 C 1 HETATM 11 O O8 DVT . . . J 2 279.28 274.933 287.089 1 20 ? O8 DVT 2002 C 1 HETATM 12 O O26 DVT . . . J 2 280.183 273.152 285.175 1 20 ? O26 DVT 2002 C 1 HETATM 13 O O24 DVT . . . J 2 279.978 272.647 287.898 1 20 ? O24 DVT 2002 C 1 HETATM 14 V V7 DVT . . . J 2 278.14 273.512 288.022 1 20 ? V7 DVT 2002 C 1 HETATM 15 O O11 DVT . . . J 2 277.019 274.898 288.358 1 20 ? O11 DVT 2002 C 1 HETATM 16 O O25 DVT . . . J 2 277.444 272.902 286.709 1 20 ? O25 DVT 2002 C 1 HETATM 17 O O21 DVT . . . J 2 277.935 272.198 289.261 1 20 ? O21 DVT 2002 C 1 HETATM 18 V V6 DVT . . . J 2 278.3 272.797 291.039 1 20 ? V6 DVT 2002 C 1 HETATM 19 O O19 DVT . . . J 2 279.511 273.692 292.239 1 20 ? O19 DVT 2002 C 1 HETATM 20 O O22 DVT . . . J 2 277.688 271.621 291.94 1 20 ? O22 DVT 2002 C 1 HETATM 21 O O6 DVT . . . J 2 277.006 274.148 291.06 1 20 ? O6 DVT 2002 C 1 HETATM 22 V V8 DVT . . . J 2 280.926 273.144 289.513 1 20 ? V8 DVT 2002 C 1 HETATM 23 O O20 DVT . . . J 2 280.122 272.032 290.524 1 20 ? O20 DVT 2002 C 1 HETATM 24 O O23 DVT . . . J 2 282.347 272.28 289.21 1 20 ? O23 DVT 2002 C 1 HETATM 25 O O16 DVT . . . J 2 278.604 276.818 288.837 1 20 ? O16 DVT 2002 C 1 HETATM 26 V V5 DVT . . . J 2 277.415 275.637 290.058 1 20 ? V5 DVT 2002 C 1 HETATM 27 O O14 DVT . . . J 2 276.17 276.645 290.306 1 20 ? O14 DVT 2002 C 1 HETATM 28 O O7 DVT . . . J 2 279.288 274.417 289.698 1 20 ? O7 DVT 2002 C 1 HETATM 29 V V2 DVT . . . J 2 280.02 275.965 288.526 1 20 ? V2 DVT 2002 C 1 HETATM 30 O O1 DVT . . . J 2 280.841 277.103 287.539 1 20 ? O1 DVT 2002 C 1 HETATM 31 O O17 DVT . . . J 2 281.656 274.217 290.943 1 20 ? O17 DVT 2002 C 1 HETATM 32 V V4 DVT . . . J 2 280.083 275.315 291.583 1 20 ? V4 DVT 2002 C 1 HETATM 33 O O13 DVT . . . J 2 278.678 276.449 291.23 1 20 ? O13 DVT 2002 C 1 HETATM 34 O O12 DVT . . . J 2 280.757 275.986 292.914 1 20 ? O12 DVT 2002 C 1 HETATM 35 O O9 DVT . . . J 2 280.938 276.467 290.159 1 20 ? O9 DVT 2002 C 1 HETATM 36 V V3 DVT . . . J 2 282.771 275.656 289.992 1 20 ? V3 DVT 2002 C 1 HETATM 37 O O3 DVT . . . J 2 282.984 276.958 288.729 1 20 ? O3 DVT 2002 C 1 HETATM 38 O O10 DVT . . . J 2 283.499 276.312 291.28 1 20 ? O10 DVT 2002 C 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 38 #