data_5WPR # _model_server_result.job_id VMRJstXsKE3-Akca2qWQjA _model_server_result.datetime_utc '2024-11-15 14:57:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wpr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5WPR # _exptl.entry_id 5WPR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.51 _cell.angle_gamma 90 _cell.entry_id 5WPR _cell.length_a 113.846 _cell.length_b 49.522 _cell.length_c 53.135 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WPR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 35 A GLY 37 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc2 A OE2 GLU 37 A GLU 39 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc3 A O GLU 93 A GLU 95 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc4 A OE1 GLU 93 A GLU 95 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc5 A O ASN 96 A ASN 98 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc6 A OD1 ASN 135 A ASN 137 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc7 A O PHE 136 A PHE 138 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc8 A O LEU 145 A LEU 147 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc9 A O GLY 147 A GLY 149 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc10 A OD1 ASP 173 A ASP 175 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc11 A OD1 ASP 214 A ASP 216 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc12 A OD2 ASP 214 A ASP 216 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc13 B CA CA . A CA 301 1_555 F O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5WPR _atom_sites.fract_transf_matrix[1][1] 0.008784 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003286 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020193 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 2 CA A 1 302 2 CA CA . D 3 TRS A 1 303 1 TRS TRS . E 4 DMS A 1 304 2 DMS DMS . F 5 HOH A 1 401 112 HOH HOH . F 5 HOH A 2 402 152 HOH HOH . F 5 HOH A 3 403 193 HOH HOH . F 5 HOH A 4 404 154 HOH HOH . F 5 HOH A 5 405 132 HOH HOH . F 5 HOH A 6 406 146 HOH HOH . F 5 HOH A 7 407 125 HOH HOH . F 5 HOH A 8 408 49 HOH HOH . F 5 HOH A 9 409 198 HOH HOH . F 5 HOH A 10 410 251 HOH HOH . F 5 HOH A 11 411 164 HOH HOH . F 5 HOH A 12 412 71 HOH HOH . F 5 HOH A 13 413 32 HOH HOH . F 5 HOH A 14 414 59 HOH HOH . F 5 HOH A 15 415 21 HOH HOH . F 5 HOH A 16 416 99 HOH HOH . F 5 HOH A 17 417 5 HOH HOH . F 5 HOH A 18 418 54 HOH HOH . F 5 HOH A 19 419 226 HOH HOH . F 5 HOH A 20 420 246 HOH HOH . F 5 HOH A 21 421 68 HOH HOH . F 5 HOH A 22 422 60 HOH HOH . F 5 HOH A 23 423 209 HOH HOH . F 5 HOH A 24 424 61 HOH HOH . F 5 HOH A 25 425 234 HOH HOH . F 5 HOH A 26 426 58 HOH HOH . F 5 HOH A 27 427 133 HOH HOH . F 5 HOH A 28 428 110 HOH HOH . F 5 HOH A 29 429 47 HOH HOH . F 5 HOH A 30 430 150 HOH HOH . F 5 HOH A 31 431 171 HOH HOH . F 5 HOH A 32 432 245 HOH HOH . F 5 HOH A 33 433 212 HOH HOH . F 5 HOH A 34 434 70 HOH HOH . F 5 HOH A 35 435 91 HOH HOH . F 5 HOH A 36 436 53 HOH HOH . F 5 HOH A 37 437 87 HOH HOH . F 5 HOH A 38 438 3 HOH HOH . F 5 HOH A 39 439 50 HOH HOH . F 5 HOH A 40 440 137 HOH HOH . F 5 HOH A 41 441 97 HOH HOH . F 5 HOH A 42 442 16 HOH HOH . F 5 HOH A 43 443 128 HOH HOH . F 5 HOH A 44 444 52 HOH HOH . F 5 HOH A 45 445 179 HOH HOH . F 5 HOH A 46 446 94 HOH HOH . F 5 HOH A 47 447 123 HOH HOH . F 5 HOH A 48 448 151 HOH HOH . F 5 HOH A 49 449 153 HOH HOH . F 5 HOH A 50 450 232 HOH HOH . F 5 HOH A 51 451 76 HOH HOH . F 5 HOH A 52 452 85 HOH HOH . F 5 HOH A 53 453 37 HOH HOH . F 5 HOH A 54 454 31 HOH HOH . F 5 HOH A 55 455 13 HOH HOH . F 5 HOH A 56 456 79 HOH HOH . F 5 HOH A 57 457 182 HOH HOH . F 5 HOH A 58 458 129 HOH HOH . F 5 HOH A 59 459 169 HOH HOH . F 5 HOH A 60 460 64 HOH HOH . F 5 HOH A 61 461 90 HOH HOH . F 5 HOH A 62 462 22 HOH HOH . F 5 HOH A 63 463 42 HOH HOH . F 5 HOH A 64 464 217 HOH HOH . F 5 HOH A 65 465 242 HOH HOH . F 5 HOH A 66 466 213 HOH HOH . F 5 HOH A 67 467 46 HOH HOH . F 5 HOH A 68 468 177 HOH HOH . F 5 HOH A 69 469 7 HOH HOH . F 5 HOH A 70 470 174 HOH HOH . F 5 HOH A 71 471 73 HOH HOH . F 5 HOH A 72 472 8 HOH HOH . F 5 HOH A 73 473 215 HOH HOH . F 5 HOH A 74 474 138 HOH HOH . F 5 HOH A 75 475 62 HOH HOH . F 5 HOH A 76 476 221 HOH HOH . F 5 HOH A 77 477 66 HOH HOH . F 5 HOH A 78 478 127 HOH HOH . F 5 HOH A 79 479 38 HOH HOH . F 5 HOH A 80 480 147 HOH HOH . F 5 HOH A 81 481 241 HOH HOH . F 5 HOH A 82 482 34 HOH HOH . F 5 HOH A 83 483 244 HOH HOH . F 5 HOH A 84 484 19 HOH HOH . F 5 HOH A 85 485 227 HOH HOH . F 5 HOH A 86 486 4 HOH HOH . F 5 HOH A 87 487 96 HOH HOH . F 5 HOH A 88 488 238 HOH HOH . F 5 HOH A 89 489 101 HOH HOH . F 5 HOH A 90 490 89 HOH HOH . F 5 HOH A 91 491 27 HOH HOH . F 5 HOH A 92 492 252 HOH HOH . F 5 HOH A 93 493 113 HOH HOH . F 5 HOH A 94 494 156 HOH HOH . F 5 HOH A 95 495 216 HOH HOH . F 5 HOH A 96 496 187 HOH HOH . F 5 HOH A 97 497 208 HOH HOH . F 5 HOH A 98 498 15 HOH HOH . F 5 HOH A 99 499 30 HOH HOH . F 5 HOH A 100 500 195 HOH HOH . F 5 HOH A 101 501 210 HOH HOH . F 5 HOH A 102 502 165 HOH HOH . F 5 HOH A 103 503 84 HOH HOH . F 5 HOH A 104 504 196 HOH HOH . F 5 HOH A 105 505 155 HOH HOH . F 5 HOH A 106 506 26 HOH HOH . F 5 HOH A 107 507 44 HOH HOH . F 5 HOH A 108 508 172 HOH HOH . F 5 HOH A 109 509 157 HOH HOH . F 5 HOH A 110 510 117 HOH HOH . F 5 HOH A 111 511 12 HOH HOH . F 5 HOH A 112 512 247 HOH HOH . F 5 HOH A 113 513 9 HOH HOH . F 5 HOH A 114 514 77 HOH HOH . F 5 HOH A 115 515 230 HOH HOH . F 5 HOH A 116 516 199 HOH HOH . F 5 HOH A 117 517 170 HOH HOH . F 5 HOH A 118 518 86 HOH HOH . F 5 HOH A 119 519 6 HOH HOH . F 5 HOH A 120 520 93 HOH HOH . F 5 HOH A 121 521 222 HOH HOH . F 5 HOH A 122 522 158 HOH HOH . F 5 HOH A 123 523 122 HOH HOH . F 5 HOH A 124 524 149 HOH HOH . F 5 HOH A 125 525 186 HOH HOH . F 5 HOH A 126 526 11 HOH HOH . F 5 HOH A 127 527 111 HOH HOH . F 5 HOH A 128 528 141 HOH HOH . F 5 HOH A 129 529 131 HOH HOH . F 5 HOH A 130 530 17 HOH HOH . F 5 HOH A 131 531 65 HOH HOH . F 5 HOH A 132 532 23 HOH HOH . F 5 HOH A 133 533 124 HOH HOH . F 5 HOH A 134 534 118 HOH HOH . F 5 HOH A 135 535 228 HOH HOH . F 5 HOH A 136 536 41 HOH HOH . F 5 HOH A 137 537 108 HOH HOH . F 5 HOH A 138 538 250 HOH HOH . F 5 HOH A 139 539 135 HOH HOH . F 5 HOH A 140 540 67 HOH HOH . F 5 HOH A 141 541 36 HOH HOH . F 5 HOH A 142 542 114 HOH HOH . F 5 HOH A 143 543 69 HOH HOH . F 5 HOH A 144 544 181 HOH HOH . F 5 HOH A 145 545 20 HOH HOH . F 5 HOH A 146 546 14 HOH HOH . F 5 HOH A 147 547 136 HOH HOH . F 5 HOH A 148 548 48 HOH HOH . F 5 HOH A 149 549 102 HOH HOH . F 5 HOH A 150 550 10 HOH HOH . F 5 HOH A 151 551 121 HOH HOH . F 5 HOH A 152 552 180 HOH HOH . F 5 HOH A 153 553 162 HOH HOH . F 5 HOH A 154 554 35 HOH HOH . F 5 HOH A 155 555 39 HOH HOH . F 5 HOH A 156 556 25 HOH HOH . F 5 HOH A 157 557 40 HOH HOH . F 5 HOH A 158 558 43 HOH HOH . F 5 HOH A 159 559 72 HOH HOH . F 5 HOH A 160 560 81 HOH HOH . F 5 HOH A 161 561 175 HOH HOH . F 5 HOH A 162 562 148 HOH HOH . F 5 HOH A 163 563 98 HOH HOH . F 5 HOH A 164 564 248 HOH HOH . F 5 HOH A 165 565 239 HOH HOH . F 5 HOH A 166 566 229 HOH HOH . F 5 HOH A 167 567 233 HOH HOH . F 5 HOH A 168 568 140 HOH HOH . F 5 HOH A 169 569 253 HOH HOH . F 5 HOH A 170 570 2 HOH HOH . F 5 HOH A 171 571 126 HOH HOH . F 5 HOH A 172 572 235 HOH HOH . F 5 HOH A 173 573 159 HOH HOH . F 5 HOH A 174 574 256 HOH HOH . F 5 HOH A 175 575 194 HOH HOH . F 5 HOH A 176 576 100 HOH HOH . F 5 HOH A 177 577 190 HOH HOH . F 5 HOH A 178 578 224 HOH HOH . F 5 HOH A 179 579 51 HOH HOH . F 5 HOH A 180 580 223 HOH HOH . F 5 HOH A 181 581 55 HOH HOH . F 5 HOH A 182 582 207 HOH HOH . F 5 HOH A 183 583 83 HOH HOH . F 5 HOH A 184 584 206 HOH HOH . F 5 HOH A 185 585 189 HOH HOH . F 5 HOH A 186 586 218 HOH HOH . F 5 HOH A 187 587 24 HOH HOH . F 5 HOH A 188 588 243 HOH HOH . F 5 HOH A 189 589 191 HOH HOH . F 5 HOH A 190 590 237 HOH HOH . F 5 HOH A 191 591 201 HOH HOH . F 5 HOH A 192 592 225 HOH HOH . F 5 HOH A 193 593 188 HOH HOH . F 5 HOH A 194 594 220 HOH HOH . F 5 HOH A 195 595 109 HOH HOH . F 5 HOH A 196 596 178 HOH HOH . F 5 HOH A 197 597 56 HOH HOH . F 5 HOH A 198 598 106 HOH HOH . F 5 HOH A 199 599 80 HOH HOH . F 5 HOH A 200 600 231 HOH HOH . F 5 HOH A 201 601 183 HOH HOH . F 5 HOH A 202 602 184 HOH HOH . F 5 HOH A 203 603 74 HOH HOH . F 5 HOH A 204 604 236 HOH HOH . F 5 HOH A 205 605 211 HOH HOH . F 5 HOH A 206 606 173 HOH HOH . F 5 HOH A 207 607 214 HOH HOH . F 5 HOH A 208 608 219 HOH HOH . F 5 HOH A 209 609 75 HOH HOH . F 5 HOH A 210 610 249 HOH HOH . F 5 HOH A 211 611 176 HOH HOH . F 5 HOH A 212 612 197 HOH HOH . F 5 HOH A 213 613 144 HOH HOH . F 5 HOH A 214 614 192 HOH HOH . F 5 HOH A 215 615 92 HOH HOH . F 5 HOH A 216 616 95 HOH HOH . F 5 HOH A 217 617 57 HOH HOH . F 5 HOH A 218 618 166 HOH HOH . F 5 HOH A 219 619 63 HOH HOH . F 5 HOH A 220 620 254 HOH HOH . F 5 HOH A 221 621 255 HOH HOH . F 5 HOH A 222 622 240 HOH HOH . F 5 HOH A 223 623 205 HOH HOH . F 5 HOH A 224 624 82 HOH HOH . F 5 HOH A 225 625 200 HOH HOH . F 5 HOH A 226 626 18 HOH HOH . F 5 HOH A 227 627 185 HOH HOH . F 5 HOH A 228 628 202 HOH HOH . F 5 HOH A 229 629 204 HOH HOH . F 5 HOH A 230 630 105 HOH HOH . F 5 HOH A 231 631 203 HOH HOH . F 5 HOH A 232 632 103 HOH HOH . F 5 HOH A 233 633 107 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.762 _atom_site.Cartn_y -31.498 _atom_site.Cartn_z -11.958 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #