data_5WPY
#
_model_server_result.job_id            4g2V9X4pyE37v9lajXo6tQ 
_model_server_result.datetime_utc      '2025-03-05 19:25:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wpy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":101}' 
#
_entry.id    5WPY 
#
_exptl.entry_id    5WPY 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              358.348 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            OG 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             38 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              38 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            P 
_struct_conn.ptnr2_label_comp_id            PN7 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             PN7 
_struct_conn.ptnr2_auth_seq_id              101 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.613 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C11 H23 N2 O7 P S' 
_chem_comp.formula_weight    358.348 
_chem_comp.id                PN7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 C3 PN7 sing 245 n n 
C3 C4 PN7 sing 246 n n 
C3 C2 PN7 sing 247 n n 
O4 C4 PN7 doub 248 n n 
CE2 C2 PN7 sing 249 n n 
C4 N5 PN7 sing 250 n n 
C1 C2 PN7 sing 251 n n 
C1 O3P PN7 sing 252 n n 
N5 C6 PN7 sing 253 n n 
C2 CE1 PN7 sing 254 n n 
C6 C7 PN7 sing 255 n n 
O2P P PN7 doub 256 n n 
O1P P PN7 sing 257 n n 
C7 C8 PN7 sing 258 n n 
P O3P PN7 sing 259 n n 
O8 C8 PN7 doub 260 n n 
C8 N9 PN7 sing 261 n n 
N9 C10 PN7 sing 262 n n 
S12 C11 PN7 sing 263 n n 
C10 C11 PN7 sing 264 n n 
O3 H1 PN7 sing 265 n n 
C1 H2 PN7 sing 266 n n 
C1 H3 PN7 sing 267 n n 
O1P H4 PN7 sing 268 n n 
CE1 H5 PN7 sing 269 n n 
CE1 H6 PN7 sing 270 n n 
CE1 H7 PN7 sing 271 n n 
CE2 H8 PN7 sing 272 n n 
CE2 H9 PN7 sing 273 n n 
CE2 H10 PN7 sing 274 n n 
C3 H11 PN7 sing 275 n n 
N5 H12 PN7 sing 276 n n 
C6 H13 PN7 sing 277 n n 
C6 H14 PN7 sing 278 n n 
C7 H15 PN7 sing 279 n n 
C7 H16 PN7 sing 280 n n 
N9 H17 PN7 sing 281 n n 
C10 H18 PN7 sing 282 n n 
C10 H19 PN7 sing 283 n n 
C11 H20 PN7 sing 284 n n 
C11 H21 PN7 sing 285 n n 
S12 H22 PN7 sing 286 n n 
P O4P PN7 sing 287 n n 
O4P H23 PN7 sing 288 n n 
#
_atom_sites.entry_id                     5WPY 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           PN7 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      101 
_pdbx_nonpoly_scheme.auth_seq_num     101 
_pdbx_nonpoly_scheme.pdb_mon_id       PN7 
_pdbx_nonpoly_scheme.auth_mon_id      SAT 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 PN7 . . . B 2 1.522 -10.117 -12.207 1 0 ? O3 PN7 101 A 1 
HETATM 2 O O4 PN7 . . . B 2 3.844 -8.54 -12.923 1 0 ? O4 PN7 101 A 1 
HETATM 3 C C2 PN7 . . . B 2 2.049 -8.438 -10.565 1 0 ? C2 PN7 101 A 1 
HETATM 4 C C1 PN7 . . . B 2 3.134 -9.436 -10.147 1 0 ? C1 PN7 101 A 1 
HETATM 5 P P PN7 . . . B 2 3.501 -10.849 -8.174 1 0 ? P PN7 101 A 1 
HETATM 6 O O1P PN7 . . . B 2 3.58 -9.645 -7.317 1 0 ? O1P PN7 101 A 1 
HETATM 7 O O2P PN7 . . . B 2 4.74 -11.462 -8.701 1 0 ? O2P PN7 101 A 1 
HETATM 8 O O3P PN7 . . . B 2 2.536 -10.514 -9.42 1 0 ? O3P PN7 101 A 1 
HETATM 9 C CE1 PN7 . . . B 2 2.595 -7.013 -10.453 1 0 ? CE1 PN7 101 A 1 
HETATM 10 C CE2 PN7 . . . B 2 0.832 -8.59 -9.65 1 0 ? CE2 PN7 101 A 1 
HETATM 11 C C3 PN7 . . . B 2 1.636 -8.713 -12.01 1 0 ? C3 PN7 101 A 1 
HETATM 12 C C4 PN7 . . . B 2 2.693 -8.155 -12.963 1 0 ? C4 PN7 101 A 1 
HETATM 13 N N5 PN7 . . . B 2 2.32 -7.222 -13.796 1 0 ? N5 PN7 101 A 1 
HETATM 14 C C6 PN7 . . . B 2 2.102 -7.553 -15.233 1 0 ? C6 PN7 101 A 1 
HETATM 15 C C7 PN7 . . . B 2 0.746 -8.243 -15.397 1 0 ? C7 PN7 101 A 1 
HETATM 16 C C8 PN7 . . . B 2 0.914 -9.752 -15.206 1 0 ? C8 PN7 101 A 1 
HETATM 17 O O8 PN7 . . . B 2 1.948 -10.313 -15.507 1 0 ? O8 PN7 101 A 1 
HETATM 18 N N9 PN7 . . . B 2 -0.124 -10.424 -14.788 1 0 ? N9 PN7 101 A 1 
HETATM 19 C C10 PN7 . . . B 2 0.051 -11.799 -14.24 1 0 ? C10 PN7 101 A 1 
HETATM 20 C C11 PN7 . . . B 2 -0.851 -12.77 -15.004 1 0 ? C11 PN7 101 A 1 
HETATM 21 S S12 PN7 . . . B 2 -0.278 -12.906 -16.715 1 0 ? S12 PN7 101 A 1 
HETATM 22 H H1 PN7 . . . B 2 2.22 -10.39 -12.806 1 0 ? H1 PN7 101 A 1 
HETATM 23 H H2 PN7 . . . B 2 3.624 -9.825 -11.027 1 0 ? H2 PN7 101 A 1 
HETATM 24 H H3 PN7 . . . B 2 3.859 -8.938 -9.522 1 0 ? H3 PN7 101 A 1 
HETATM 25 H H5 PN7 . . . B 2 3.641 -7.005 -10.722 1 0 ? H5 PN7 101 A 1 
HETATM 26 H H6 PN7 . . . B 2 2.482 -6.663 -9.438 1 0 ? H6 PN7 101 A 1 
HETATM 27 H H7 PN7 . . . B 2 2.047 -6.364 -11.12 1 0 ? H7 PN7 101 A 1 
HETATM 28 H H8 PN7 . . . B 2 0.242 -9.435 -9.973 1 0 ? H8 PN7 101 A 1 
HETATM 29 H H9 PN7 . . . B 2 0.233 -7.693 -9.697 1 0 ? H9 PN7 101 A 1 
HETATM 30 H H10 PN7 . . . B 2 1.163 -8.75 -8.634 1 0 ? H10 PN7 101 A 1 
HETATM 31 H H11 PN7 . . . B 2 0.686 -8.235 -12.209 1 0 ? H11 PN7 101 A 1 
HETATM 32 H H12 PN7 . . . B 2 2.256 -6.292 -13.493 1 0 ? H12 PN7 101 A 1 
HETATM 33 H H13 PN7 . . . B 2 2.118 -6.645 -15.818 1 0 ? H13 PN7 101 A 1 
HETATM 34 H H14 PN7 . . . B 2 2.886 -8.214 -15.573 1 0 ? H14 PN7 101 A 1 
HETATM 35 H H15 PN7 . . . B 2 0.361 -8.049 -16.387 1 0 ? H15 PN7 101 A 1 
HETATM 36 H H16 PN7 . . . B 2 0.056 -7.86 -14.66 1 0 ? H16 PN7 101 A 1 
HETATM 37 H H17 PN7 . . . B 2 -1.02 -10.033 -14.853 1 0 ? H17 PN7 101 A 1 
HETATM 38 H H18 PN7 . . . B 2 1.081 -12.102 -14.349 1 0 ? H18 PN7 101 A 1 
HETATM 39 H H19 PN7 . . . B 2 -0.217 -11.806 -13.193 1 0 ? H19 PN7 101 A 1 
HETATM 40 H H20 PN7 . . . B 2 -1.867 -12.403 -14.992 1 0 ? H20 PN7 101 A 1 
HETATM 41 H H21 PN7 . . . B 2 -0.814 -13.742 -14.533 1 0 ? H21 PN7 101 A 1 
HETATM 42 H H22 PN7 . . . B 2 0.671 -13.052 -16.699 1 0 ? H22 PN7 101 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    325 
_model_server_stats.query_time_ms           5856 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           42 
#