data_5WQR
#
_model_server_result.job_id            RCfcMzuaDSxHTj21CM5yvg 
_model_server_result.datetime_utc      '2025-09-04 02:12:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wqr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":108}' 
#
_entry.id    5WQR 
#
_exptl.entry_id    5WQR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5WQR 
_cell.length_a            46.33 
_cell.length_b            58.811 
_cell.length_c            23.423 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5WQR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 I N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 43 A CYS 43 1_555 B FE1 SF4 . A SF4 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
metalc ? metalc2 A SG CYS 46 A CYS 46 1_555 B FE2 SF4 . A SF4 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc3 A SG CYS 61 A CYS 61 1_555 B FE3 SF4 . A SF4 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc4 A SG CYS 75 A CYS 75 1_555 B FE4 SF4 . A SF4 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5WQR 
_atom_sites.fract_transf_matrix[1][1]    0.021584 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017004 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.042693 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SF4 A 1 101 101 SF4 SF4 . 
C 3 SO4 A 1 102 102 SO4 SO4 . 
D 3 SO4 A 1 103 103 SO4 SO4 . 
E 3 SO4 A 1 104 104 SO4 SO4 . 
F 3 SO4 A 1 105 105 SO4 SO4 . 
G 3 SO4 A 1 106 106 SO4 SO4 . 
H 4 GOL A 1 107 107 GOL GOL . 
I 4 GOL A 1 108 108 GOL GOL . 
J 4 GOL A 1 109 109 GOL GOL . 
K 5 HOH A 1 201 201 HOH HOH . 
K 5 HOH A 2 202 202 HOH HOH . 
K 5 HOH A 3 203 203 HOH HOH . 
K 5 HOH A 4 204 204 HOH HOH . 
K 5 HOH A 5 205 205 HOH HOH . 
K 5 HOH A 6 206 206 HOH HOH . 
K 5 HOH A 7 207 207 HOH HOH . 
K 5 HOH A 8 208 208 HOH HOH . 
K 5 HOH A 9 209 209 HOH HOH . 
K 5 HOH A 10 210 210 HOH HOH . 
K 5 HOH A 11 211 211 HOH HOH . 
K 5 HOH A 12 212 212 HOH HOH . 
K 5 HOH A 13 213 213 HOH HOH . 
K 5 HOH A 14 214 214 HOH HOH . 
K 5 HOH A 15 215 215 HOH HOH . 
K 5 HOH A 16 216 216 HOH HOH . 
K 5 HOH A 17 217 217 HOH HOH . 
K 5 HOH A 18 218 218 HOH HOH . 
K 5 HOH A 19 219 219 HOH HOH . 
K 5 HOH A 20 220 220 HOH HOH . 
K 5 HOH A 21 221 221 HOH HOH . 
K 5 HOH A 22 222 222 HOH HOH . 
K 5 HOH A 23 223 223 HOH HOH . 
K 5 HOH A 24 224 224 HOH HOH . 
K 5 HOH A 25 225 225 HOH HOH . 
K 5 HOH A 26 226 226 HOH HOH . 
K 5 HOH A 27 227 227 HOH HOH . 
K 5 HOH A 28 228 228 HOH HOH . 
K 5 HOH A 29 229 229 HOH HOH . 
K 5 HOH A 30 230 230 HOH HOH . 
K 5 HOH A 31 231 231 HOH HOH . 
K 5 HOH A 32 232 232 HOH HOH . 
K 5 HOH A 33 233 233 HOH HOH . 
K 5 HOH A 34 234 234 HOH HOH . 
K 5 HOH A 35 235 235 HOH HOH . 
K 5 HOH A 36 236 236 HOH HOH . 
K 5 HOH A 37 237 237 HOH HOH . 
K 5 HOH A 38 238 238 HOH HOH . 
K 5 HOH A 39 239 239 HOH HOH . 
K 5 HOH A 40 240 240 HOH HOH . 
K 5 HOH A 41 241 241 HOH HOH . 
K 5 HOH A 42 242 242 HOH HOH . 
K 5 HOH A 43 243 243 HOH HOH . 
K 5 HOH A 44 244 244 HOH HOH . 
K 5 HOH A 45 245 245 HOH HOH . 
K 5 HOH A 46 246 246 HOH HOH . 
K 5 HOH A 47 247 247 HOH HOH . 
K 5 HOH A 48 248 248 HOH HOH . 
K 5 HOH A 49 249 249 HOH HOH . 
K 5 HOH A 50 250 250 HOH HOH . 
K 5 HOH A 51 251 251 HOH HOH . 
K 5 HOH A 52 252 252 HOH HOH . 
K 5 HOH A 53 253 253 HOH HOH . 
K 5 HOH A 54 254 254 HOH HOH . 
K 5 HOH A 55 255 255 HOH HOH . 
K 5 HOH A 56 256 256 HOH HOH . 
K 5 HOH A 57 257 257 HOH HOH . 
K 5 HOH A 58 258 258 HOH HOH . 
K 5 HOH A 59 259 259 HOH HOH . 
K 5 HOH A 60 260 260 HOH HOH . 
K 5 HOH A 61 261 261 HOH HOH . 
K 5 HOH A 62 262 262 HOH HOH . 
K 5 HOH A 63 263 263 HOH HOH . 
K 5 HOH A 64 264 264 HOH HOH . 
K 5 HOH A 65 265 265 HOH HOH . 
K 5 HOH A 66 266 266 HOH HOH . 
K 5 HOH A 67 267 267 HOH HOH . 
K 5 HOH A 68 268 268 HOH HOH . 
K 5 HOH A 69 269 269 HOH HOH . 
K 5 HOH A 70 270 270 HOH HOH . 
K 5 HOH A 71 271 271 HOH HOH . 
K 5 HOH A 72 272 272 HOH HOH . 
K 5 HOH A 73 273 273 HOH HOH . 
K 5 HOH A 74 274 274 HOH HOH . 
K 5 HOH A 75 275 275 HOH HOH . 
K 5 HOH A 76 276 276 HOH HOH . 
K 5 HOH A 77 277 277 HOH HOH . 
K 5 HOH A 78 278 278 HOH HOH . 
K 5 HOH A 79 279 279 HOH HOH . 
K 5 HOH A 80 280 280 HOH HOH . 
K 5 HOH A 81 281 281 HOH HOH . 
K 5 HOH A 82 282 282 HOH HOH . 
K 5 HOH A 83 283 283 HOH HOH . 
K 5 HOH A 84 284 284 HOH HOH . 
K 5 HOH A 85 285 285 HOH HOH . 
K 5 HOH A 86 286 286 HOH HOH . 
K 5 HOH A 87 287 287 HOH HOH . 
K 5 HOH A 88 288 288 HOH HOH . 
K 5 HOH A 89 289 289 HOH HOH . 
K 5 HOH A 90 290 290 HOH HOH . 
K 5 HOH A 91 291 291 HOH HOH . 
K 5 HOH A 92 292 292 HOH HOH . 
K 5 HOH A 93 293 293 HOH HOH . 
K 5 HOH A 94 294 294 HOH HOH . 
K 5 HOH A 95 295 295 HOH HOH . 
K 5 HOH A 96 296 296 HOH HOH . 
K 5 HOH A 97 297 297 HOH HOH . 
K 5 HOH A 98 298 298 HOH HOH . 
K 5 HOH A 99 299 299 HOH HOH . 
K 5 HOH A 100 300 300 HOH HOH . 
K 5 HOH A 101 301 301 HOH HOH . 
K 5 HOH A 102 302 302 HOH HOH . 
K 5 HOH A 103 303 303 HOH HOH . 
K 5 HOH A 104 304 304 HOH HOH . 
K 5 HOH A 105 305 305 HOH HOH . 
K 5 HOH A 106 306 306 HOH HOH . 
K 5 HOH A 107 307 307 HOH HOH . 
K 5 HOH A 108 308 308 HOH HOH . 
K 5 HOH A 109 309 309 HOH HOH . 
K 5 HOH A 110 310 310 HOH HOH . 
K 5 HOH A 111 311 311 HOH HOH . 
K 5 HOH A 112 312 312 HOH HOH . 
K 5 HOH A 113 313 313 HOH HOH . 
K 5 HOH A 114 314 314 HOH HOH . 
K 5 HOH A 115 315 315 HOH HOH . 
K 5 HOH A 116 316 316 HOH HOH . 
K 5 HOH A 117 317 317 HOH HOH . 
K 5 HOH A 118 318 318 HOH HOH . 
K 5 HOH A 119 319 319 HOH HOH . 
K 5 HOH A 120 320 320 HOH HOH . 
K 5 HOH A 121 321 321 HOH HOH . 
K 5 HOH A 122 322 322 HOH HOH . 
K 5 HOH A 123 323 323 HOH HOH . 
K 5 HOH A 124 324 324 HOH HOH . 
K 5 HOH A 125 325 325 HOH HOH . 
K 5 HOH A 126 326 326 HOH HOH . 
K 5 HOH A 127 327 327 HOH HOH . 
K 5 HOH A 128 328 328 HOH HOH . 
K 5 HOH A 129 329 329 HOH HOH . 
K 5 HOH A 130 330 330 HOH HOH . 
K 5 HOH A 131 331 331 HOH HOH . 
K 5 HOH A 132 332 332 HOH HOH . 
K 5 HOH A 133 333 333 HOH HOH . 
K 5 HOH A 134 334 334 HOH HOH . 
K 5 HOH A 135 335 335 HOH HOH . 
K 5 HOH A 136 336 336 HOH HOH . 
K 5 HOH A 137 337 337 HOH HOH . 
K 5 HOH A 138 338 338 HOH HOH . 
K 5 HOH A 139 339 339 HOH HOH . 
K 5 HOH A 140 340 340 HOH HOH . 
K 5 HOH A 141 341 341 HOH HOH . 
K 5 HOH A 142 342 342 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 4 12.399 21.13 13.215 0.79 15.41 ? C1 GOL 108 A 1 
HETATM 2 O O1 GOL . . . I 4 12.69 22.469 13.715 0.79 11.89 ? O1 GOL 108 A 1 
HETATM 3 C C2 GOL . . . I 4 11.381 20.29 14.062 0.79 19.92 ? C2 GOL 108 A 1 
HETATM 4 O O2 GOL . . . I 4 11.802 20.184 15.401 0.79 21.38 ? O2 GOL 108 A 1 
HETATM 5 C C3 GOL . . . I 4 11.186 18.996 13.342 0.79 14.44 ? C3 GOL 108 A 1 
HETATM 6 O O3 GOL . . . I 4 10.043 19.315 12.558 0.79 7.61 ? O3 GOL 108 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#