data_5WSP # _model_server_result.job_id cyL7NTKSo1BgIPFfqRMACg _model_server_result.datetime_utc '2024-10-18 16:20:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wsp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 5WSP # _exptl.entry_id 5WSP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 87.62 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'STRONTIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WSP _cell.length_a 42.471 _cell.length_b 42.471 _cell.length_c 25.147 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WSP _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O4 DT 3 A DT 3 1_555 B SR SR . A SR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc2 B SR SR . A SR 101 1_555 C O HOH . A HOH 225 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc3 B SR SR . A SR 101 1_555 C O HOH . A HOH 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc4 B SR SR . A SR 101 1_555 C O HOH . A HOH 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc5 B SR SR . A SR 101 1_555 C O HOH . A HOH 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc6 B SR SR . A SR 101 1_555 C O HOH . A HOH 264 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1 1_555 A N3 DC 8 A DC 8 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1 1_555 A O2 DC 8 A DC 8 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1 1_555 A N4 DC 8 A DC 8 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 A N3 DC 7 A DC 7 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 A O2 DC 7 A DC 7 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 A N4 DC 7 A DC 7 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_16_PAIR hydrog7 A N3 DT 3 A DT 3 1_555 A O4 DT 6 A DT 6 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_16_PAIR hydrog8 A O2 DT 3 A DT 3 1_555 A N3 DT 6 A DT 6 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N3 DC 4 A DC 4 1_555 A N1 DG 5 A DG 5 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N4 DC 4 A DC 4 1_555 A O6 DG 5 A DG 5 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O2 DC 4 A DC 4 1_555 A N2 DG 5 A DG 5 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DG 5 A DG 5 1_555 A N3 DC 4 A DC 4 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N2 DG 5 A DG 5 1_555 A O2 DC 4 A DC 4 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O6 DG 5 A DG 5 1_555 A N4 DC 4 A DC 4 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_16_PAIR hydrog15 A N3 DT 6 A DT 6 1_555 A O2 DT 3 A DT 3 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_16_PAIR hydrog16 A O4 DT 6 A DT 6 1_555 A N3 DT 3 A DT 3 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DC 7 A DC 7 1_555 A N1 DG 2 A DG 2 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N4 DC 7 A DC 7 1_555 A O6 DG 2 A DG 2 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A O2 DC 7 A DC 7 1_555 A N2 DG 2 A DG 2 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N3 DC 8 A DC 8 1_555 A N1 DG 1 A DG 1 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N4 DC 8 A DC 8 1_555 A O6 DG 1 A DG 1 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A O2 DC 8 A DC 8 1_555 A N2 DG 1 A DG 1 7_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Sr 2' _chem_comp.formula_weight 87.62 _chem_comp.id SR _chem_comp.mon_nstd_flag . _chem_comp.name 'STRONTIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5WSP _atom_sites.fract_transf_matrix[1][1] 0.023545 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023545 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.039766 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SR A 1 101 1 SR SR . C 3 HOH A 1 201 47 HOH HOH . C 3 HOH A 2 202 21 HOH HOH . C 3 HOH A 3 203 54 HOH HOH . C 3 HOH A 4 204 20 HOH HOH . C 3 HOH A 5 205 7 HOH HOH . C 3 HOH A 6 206 2 HOH HOH . C 3 HOH A 7 207 40 HOH HOH . C 3 HOH A 8 208 38 HOH HOH . C 3 HOH A 9 209 34 HOH HOH . C 3 HOH A 10 210 13 HOH HOH . C 3 HOH A 11 211 17 HOH HOH . C 3 HOH A 12 212 60 HOH HOH . C 3 HOH A 13 213 15 HOH HOH . C 3 HOH A 14 214 30 HOH HOH . C 3 HOH A 15 215 6 HOH HOH . C 3 HOH A 16 216 14 HOH HOH . C 3 HOH A 17 217 41 HOH HOH . C 3 HOH A 18 218 25 HOH HOH . C 3 HOH A 19 219 56 HOH HOH . C 3 HOH A 20 220 19 HOH HOH . C 3 HOH A 21 221 12 HOH HOH . C 3 HOH A 22 222 26 HOH HOH . C 3 HOH A 23 223 31 HOH HOH . C 3 HOH A 24 224 24 HOH HOH . C 3 HOH A 25 225 8 HOH HOH . C 3 HOH A 26 226 3 HOH HOH . C 3 HOH A 27 227 63 HOH HOH . C 3 HOH A 28 228 23 HOH HOH . C 3 HOH A 29 229 18 HOH HOH . C 3 HOH A 30 230 22 HOH HOH . C 3 HOH A 31 231 36 HOH HOH . C 3 HOH A 32 232 16 HOH HOH . C 3 HOH A 33 233 48 HOH HOH . C 3 HOH A 34 234 45 HOH HOH . C 3 HOH A 35 235 5 HOH HOH . C 3 HOH A 36 236 1 HOH HOH . C 3 HOH A 37 237 39 HOH HOH . C 3 HOH A 38 238 43 HOH HOH . C 3 HOH A 39 239 4 HOH HOH . C 3 HOH A 40 240 33 HOH HOH . C 3 HOH A 41 241 29 HOH HOH . C 3 HOH A 42 242 61 HOH HOH . C 3 HOH A 43 243 64 HOH HOH . C 3 HOH A 44 244 52 HOH HOH . C 3 HOH A 45 245 9 HOH HOH . C 3 HOH A 46 246 27 HOH HOH . C 3 HOH A 47 247 42 HOH HOH . C 3 HOH A 48 248 10 HOH HOH . C 3 HOH A 49 249 44 HOH HOH . C 3 HOH A 50 250 37 HOH HOH . C 3 HOH A 51 251 32 HOH HOH . C 3 HOH A 52 252 55 HOH HOH . C 3 HOH A 53 253 49 HOH HOH . C 3 HOH A 54 254 53 HOH HOH . C 3 HOH A 55 255 57 HOH HOH . C 3 HOH A 56 256 59 HOH HOH . C 3 HOH A 57 257 28 HOH HOH . C 3 HOH A 58 258 11 HOH HOH . C 3 HOH A 59 259 51 HOH HOH . C 3 HOH A 60 260 46 HOH HOH . C 3 HOH A 61 261 62 HOH HOH . C 3 HOH A 62 262 50 HOH HOH . C 3 HOH A 63 263 58 HOH HOH . C 3 HOH A 64 264 35 HOH HOH . C 3 HOH A 65 265 65 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol SR _atom_site.label_atom_id SR _atom_site.label_comp_id SR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.231 _atom_site.Cartn_y 5.683 _atom_site.Cartn_z -2.184 _atom_site.occupancy 0.39 _atom_site.B_iso_or_equiv 14.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id SR _atom_site.auth_comp_id SR _atom_site.auth_seq_id 101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #