data_5WWV
#
_model_server_result.job_id            8F0htpSpOugqMiCJ6e4l9A 
_model_server_result.datetime_utc      '2024-11-19 11:35:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wwv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":401}' 
#
_entry.id    5WWV 
#
_exptl.entry_id    5WWV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5WWV 
_cell.length_a            170.064 
_cell.length_b            273.95 
_cell.length_c            136.8 
_cell.Z_PDB               64 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5WWV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
? dimeric 2 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,K,L,M,N,O,P,Q,R,WA,XA 1 1 
C,D,S,T,U,V,W,X,Y,Z,AA,YA,ZA 2 1 
E,F,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,AB,BB 3 1 
G,H,NA,OA,PA,QA,RA,SA,TA,UA,VA,CB 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 P N N 
? 2 S N N 
? 2 W N N 
? 2 BA N N 
? 2 HA N N 
? 2 NA N N 
? 2 RA N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 111 n n 
PA O2A FAD sing 112 n n 
PA O5B FAD sing 113 n n 
PA O3P FAD sing 114 n n 
O2A HOA2 FAD sing 115 n n 
O5B C5B FAD sing 116 n n 
C5B C4B FAD sing 117 n n 
C5B H51A FAD sing 118 n n 
C5B H52A FAD sing 119 n n 
C4B O4B FAD sing 120 n n 
C4B C3B FAD sing 121 n n 
C4B H4B FAD sing 122 n n 
O4B C1B FAD sing 123 n n 
C3B O3B FAD sing 124 n n 
C3B C2B FAD sing 125 n n 
C3B H3B FAD sing 126 n n 
O3B HO3A FAD sing 127 n n 
C2B O2B FAD sing 128 n n 
C2B C1B FAD sing 129 n n 
C2B H2B FAD sing 130 n n 
O2B HO2A FAD sing 131 n n 
C1B N9A FAD sing 132 n n 
C1B H1B FAD sing 133 n n 
N9A C8A FAD sing 134 n y 
N9A C4A FAD sing 135 n y 
C8A N7A FAD doub 136 n y 
C8A H8A FAD sing 137 n n 
N7A C5A FAD sing 138 n y 
C5A C6A FAD sing 139 n y 
C5A C4A FAD doub 140 n y 
C6A N6A FAD sing 141 n n 
C6A N1A FAD doub 142 n y 
N6A H61A FAD sing 143 n n 
N6A H62A FAD sing 144 n n 
N1A C2A FAD sing 145 n y 
C2A N3A FAD doub 146 n y 
C2A H2A FAD sing 147 n n 
N3A C4A FAD sing 148 n y 
N1 C2 FAD sing 149 n n 
N1 C10 FAD doub 150 n n 
C2 O2 FAD doub 151 n n 
C2 N3 FAD sing 152 n n 
N3 C4 FAD sing 153 n n 
N3 HN3 FAD sing 154 n n 
C4 O4 FAD doub 155 n n 
C4 C4X FAD sing 156 n n 
C4X N5 FAD doub 157 n n 
C4X C10 FAD sing 158 n n 
N5 C5X FAD sing 159 n n 
C5X C6 FAD doub 160 n y 
C5X C9A FAD sing 161 n y 
C6 C7 FAD sing 162 n y 
C6 H6 FAD sing 163 n n 
C7 C7M FAD sing 164 n n 
C7 C8 FAD doub 165 n y 
C7M HM71 FAD sing 166 n n 
C7M HM72 FAD sing 167 n n 
C7M HM73 FAD sing 168 n n 
C8 C8M FAD sing 169 n n 
C8 C9 FAD sing 170 n y 
C8M HM81 FAD sing 171 n n 
C8M HM82 FAD sing 172 n n 
C8M HM83 FAD sing 173 n n 
C9 C9A FAD doub 174 n y 
C9 H9 FAD sing 175 n n 
C9A N10 FAD sing 176 n n 
N10 C10 FAD sing 177 n n 
N10 C1' FAD sing 178 n n 
C1' C2' FAD sing 179 n n 
C1' "H1'1" FAD sing 180 n n 
C1' "H1'2" FAD sing 181 n n 
C2' O2' FAD sing 182 n n 
C2' C3' FAD sing 183 n n 
C2' H2' FAD sing 184 n n 
O2' HO2' FAD sing 185 n n 
C3' O3' FAD sing 186 n n 
C3' C4' FAD sing 187 n n 
C3' H3' FAD sing 188 n n 
O3' HO3' FAD sing 189 n n 
C4' O4' FAD sing 190 n n 
C4' C5' FAD sing 191 n n 
C4' H4' FAD sing 192 n n 
O4' HO4' FAD sing 193 n n 
C5' O5' FAD sing 194 n n 
C5' "H5'1" FAD sing 195 n n 
C5' "H5'2" FAD sing 196 n n 
O5' P FAD sing 197 n n 
P O1P FAD doub 198 n n 
P O2P FAD sing 199 n n 
P O3P FAD sing 200 n n 
O2P HOP2 FAD sing 201 n n 
#
_atom_sites.entry_id                     5WWV 
_atom_sites.fract_transf_matrix[1][1]    0.00588 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00365 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00731 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 FAD A 1 401 401 FAD FAD . 
J 3 7V3 A 1 402 402 7V3 XXX . 
K 4 MPD A 1 403 411 MPD MPD . 
L 4 MPD A 1 404 412 MPD MPD . 
M 4 MPD A 1 405 417 MPD MPD . 
N 4 MPD A 1 406 418 MPD MPD . 
O 5 SO4 A 1 407 420 SO4 SO4 . 
P 2 FAD B 1 401 401 FAD FAD . 
Q 4 MPD B 1 402 412 MPD MPD . 
R 4 MPD B 1 403 414 MPD MPD . 
S 2 FAD C 1 401 401 FAD FAD . 
T 3 7V3 C 1 402 402 7V3 XXX . 
U 4 MPD C 1 403 412 MPD MPD . 
V 5 SO4 C 1 404 420 SO4 SO4 . 
W 2 FAD D 1 401 401 FAD FAD . 
X 3 7V3 D 1 402 402 7V3 XXX . 
Y 4 MPD D 1 403 416 MPD MPD . 
Z 4 MPD D 1 404 417 MPD MPD . 
AA 5 SO4 D 1 405 420 SO4 SO4 . 
BA 2 FAD E 1 401 401 FAD FAD . 
CA 4 MPD E 1 402 402 MPD MPD . 
DA 4 MPD E 1 403 411 MPD MPD . 
EA 4 MPD E 1 404 416 MPD MPD . 
FA 5 SO4 E 1 405 420 SO4 SO4 . 
GA 4 MPD E 1 406 418 MPD MPD . 
HA 2 FAD F 1 401 401 FAD FAD . 
IA 3 7V3 F 1 402 402 7V3 XXX . 
JA 4 MPD F 1 403 412 MPD MPD . 
KA 4 MPD F 1 404 411 MPD MPD . 
LA 4 MPD F 1 405 412 MPD MPD . 
MA 5 SO4 F 1 406 420 SO4 SO4 . 
NA 2 FAD G 1 401 401 FAD FAD . 
OA 3 7V3 G 1 402 402 7V3 XXX . 
PA 4 MPD G 1 403 411 MPD MPD . 
QA 4 MPD G 1 404 416 MPD MPD . 
RA 2 FAD H 1 401 401 FAD FAD . 
SA 4 MPD H 1 402 402 MPD MPD . 
TA 4 MPD H 1 403 411 MPD MPD . 
UA 4 MPD H 1 404 412 MPD MPD . 
VA 5 SO4 H 1 405 420 SO4 SO4 . 
WA 6 HOH A 1 501 504 HOH HOH . 
WA 6 HOH A 2 502 502 HOH HOH . 
WA 6 HOH A 3 503 506 HOH HOH . 
WA 6 HOH A 4 504 501 HOH HOH . 
WA 6 HOH A 5 505 503 HOH HOH . 
WA 6 HOH A 6 506 505 HOH HOH . 
WA 6 HOH A 7 507 507 HOH HOH . 
XA 6 HOH B 1 501 503 HOH HOH . 
XA 6 HOH B 2 502 506 HOH HOH . 
XA 6 HOH B 3 503 508 HOH HOH . 
XA 6 HOH B 4 504 507 HOH HOH . 
XA 6 HOH B 5 505 501 HOH HOH . 
XA 6 HOH B 6 506 502 HOH HOH . 
XA 6 HOH B 7 507 505 HOH HOH . 
XA 6 HOH B 8 508 504 HOH HOH . 
YA 6 HOH C 1 501 507 HOH HOH . 
YA 6 HOH C 2 502 504 HOH HOH . 
YA 6 HOH C 3 503 505 HOH HOH . 
YA 6 HOH C 4 504 503 HOH HOH . 
YA 6 HOH C 5 505 501 HOH HOH . 
YA 6 HOH C 6 506 509 HOH HOH . 
YA 6 HOH C 7 507 502 HOH HOH . 
YA 6 HOH C 8 508 508 HOH HOH . 
YA 6 HOH C 9 509 506 HOH HOH . 
ZA 6 HOH D 1 501 503 HOH HOH . 
ZA 6 HOH D 2 502 508 HOH HOH . 
ZA 6 HOH D 3 503 501 HOH HOH . 
ZA 6 HOH D 4 504 502 HOH HOH . 
ZA 6 HOH D 5 505 509 HOH HOH . 
ZA 6 HOH D 6 506 507 HOH HOH . 
ZA 6 HOH D 7 507 504 HOH HOH . 
ZA 6 HOH D 8 508 506 HOH HOH . 
ZA 6 HOH D 9 509 505 HOH HOH . 
AB 6 HOH E 1 501 504 HOH HOH . 
AB 6 HOH E 2 502 502 HOH HOH . 
AB 6 HOH E 3 503 503 HOH HOH . 
AB 6 HOH E 4 504 505 HOH HOH . 
AB 6 HOH E 5 505 501 HOH HOH . 
BB 6 HOH F 1 501 502 HOH HOH . 
BB 6 HOH F 2 502 501 HOH HOH . 
CB 6 HOH H 1 501 502 HOH HOH . 
CB 6 HOH H 2 502 505 HOH HOH . 
CB 6 HOH H 3 503 504 HOH HOH . 
CB 6 HOH H 4 504 503 HOH HOH . 
CB 6 HOH H 5 505 501 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . I 2 -8.643 -18.133 18.838 1 48.08 ? PA FAD 401 A 1 
HETATM 2 O O1A FAD . . . I 2 -8.463 -17.521 17.493 1 54.52 ? O1A FAD 401 A 1 
HETATM 3 O O2A FAD . . . I 2 -7.549 -18.063 19.886 1 56.37 ? O2A FAD 401 A 1 
HETATM 4 O O5B FAD . . . I 2 -9.975 -17.46 19.36 1 51.59 ? O5B FAD 401 A 1 
HETATM 5 C C5B FAD . . . I 2 -10.496 -17.866 20.627 1 55.22 ? C5B FAD 401 A 1 
HETATM 6 C C4B FAD . . . I 2 -11.494 -16.836 21.125 1 53.47 ? C4B FAD 401 A 1 
HETATM 7 O O4B FAD . . . I 2 -12.107 -17.264 22.326 1 51.34 ? O4B FAD 401 A 1 
HETATM 8 C C3B FAD . . . I 2 -10.834 -15.504 21.443 1 51.69 ? C3B FAD 401 A 1 
HETATM 9 O O3B FAD . . . I 2 -11.678 -14.446 20.976 1 51.52 ? O3B FAD 401 A 1 
HETATM 10 C C2B FAD . . . I 2 -10.75 -15.471 22.936 1 51.47 ? C2B FAD 401 A 1 
HETATM 11 O O2B FAD . . . I 2 -10.752 -14.141 23.445 1 53.65 ? O2B FAD 401 A 1 
HETATM 12 C C1B FAD . . . I 2 -12.028 -16.203 23.284 1 53.86 ? C1B FAD 401 A 1 
HETATM 13 N N9A FAD . . . I 2 -12.064 -16.709 24.683 1 55.75 ? N9A FAD 401 A 1 
HETATM 14 C C8A FAD . . . I 2 -11.349 -17.725 25.199 1 56.59 ? C8A FAD 401 A 1 
HETATM 15 N N7A FAD . . . I 2 -11.631 -17.921 26.499 1 55.69 ? N7A FAD 401 A 1 
HETATM 16 C C5A FAD . . . I 2 -12.538 -17.012 26.821 1 58.19 ? C5A FAD 401 A 1 
HETATM 17 C C6A FAD . . . I 2 -13.264 -16.672 28.05 1 64.87 ? C6A FAD 401 A 1 
HETATM 18 N N6A FAD . . . I 2 -13.041 -17.379 29.196 1 71.35 ? N6A FAD 401 A 1 
HETATM 19 N N1A FAD . . . I 2 -14.13 -15.628 27.956 1 60.76 ? N1A FAD 401 A 1 
HETATM 20 C C2A FAD . . . I 2 -14.333 -14.93 26.809 1 56.09 ? C2A FAD 401 A 1 
HETATM 21 N N3A FAD . . . I 2 -13.711 -15.21 25.653 1 52.97 ? N3A FAD 401 A 1 
HETATM 22 C C4A FAD . . . I 2 -12.825 -16.217 25.621 1 53.98 ? C4A FAD 401 A 1 
HETATM 23 N N1 FAD . . . I 2 -4.169 -22.862 11.058 1 38.88 ? N1 FAD 401 A 1 
HETATM 24 C C2 FAD . . . I 2 -4.311 -23.006 9.703 1 39.28 ? C2 FAD 401 A 1 
HETATM 25 O O2 FAD . . . I 2 -5.358 -23.538 9.241 1 36.64 ? O2 FAD 401 A 1 
HETATM 26 N N3 FAD . . . I 2 -3.342 -22.607 8.845 1 40.01 ? N3 FAD 401 A 1 
HETATM 27 C C4 FAD . . . I 2 -2.2 -22.047 9.274 1 39.29 ? C4 FAD 401 A 1 
HETATM 28 O O4 FAD . . . I 2 -1.336 -21.678 8.466 1 40.77 ? O4 FAD 401 A 1 
HETATM 29 C C4X FAD . . . I 2 -1.993 -21.877 10.722 1 37.85 ? C4X FAD 401 A 1 
HETATM 30 N N5 FAD . . . I 2 -0.879 -21.34 11.211 1 38.35 ? N5 FAD 401 A 1 
HETATM 31 C C5X FAD . . . I 2 -0.696 -21.195 12.556 1 39.52 ? C5X FAD 401 A 1 
HETATM 32 C C6 FAD . . . I 2 0.501 -20.633 12.995 1 42.91 ? C6 FAD 401 A 1 
HETATM 33 C C7 FAD . . . I 2 0.76 -20.442 14.335 1 40.07 ? C7 FAD 401 A 1 
HETATM 34 C C7M FAD . . . I 2 2.062 -19.827 14.752 1 40.7 ? C7M FAD 401 A 1 
HETATM 35 C C8 FAD . . . I 2 -0.262 -20.836 15.325 1 39.73 ? C8 FAD 401 A 1 
HETATM 36 C C8M FAD . . . I 2 0.026 -20.628 16.806 1 41.07 ? C8M FAD 401 A 1 
HETATM 37 C C9 FAD . . . I 2 -1.465 -21.389 14.895 1 36.05 ? C9 FAD 401 A 1 
HETATM 38 C C9A FAD . . . I 2 -1.724 -21.6 13.545 1 36.74 ? C9A FAD 401 A 1 
HETATM 39 N N10 FAD . . . I 2 -2.914 -22.182 13.031 1 39.21 ? N10 FAD 401 A 1 
HETATM 40 C C10 FAD . . . I 2 -3.064 -22.331 11.629 1 38.33 ? C10 FAD 401 A 1 
HETATM 41 C C1' FAD . . . I 2 -4.011 -22.63 13.907 1 41.57 ? C1' FAD 401 A 1 
HETATM 42 C C2' FAD . . . I 2 -5.116 -21.58 14.136 1 41.42 ? C2' FAD 401 A 1 
HETATM 43 O O2' FAD . . . I 2 -4.54 -20.338 14.564 1 44.69 ? O2' FAD 401 A 1 
HETATM 44 C C3' FAD . . . I 2 -6.11 -22.03 15.203 1 38.31 ? C3' FAD 401 A 1 
HETATM 45 O O3' FAD . . . I 2 -6.587 -23.335 14.908 1 37.13 ? O3' FAD 401 A 1 
HETATM 46 C C4' FAD . . . I 2 -7.301 -21.111 15.235 1 38.12 ? C4' FAD 401 A 1 
HETATM 47 O O4' FAD . . . I 2 -6.84 -19.788 15.473 1 40.14 ? O4' FAD 401 A 1 
HETATM 48 C C5' FAD . . . I 2 -8.285 -21.487 16.326 1 38.41 ? C5' FAD 401 A 1 
HETATM 49 O O5' FAD . . . I 2 -9.356 -20.547 16.338 1 40.29 ? O5' FAD 401 A 1 
HETATM 50 P P FAD . . . I 2 -10.148 -20.302 17.693 1 44.62 ? P FAD 401 A 1 
HETATM 51 O O1P FAD . . . I 2 -10.317 -21.737 18.181 1 50.7 ? O1P FAD 401 A 1 
HETATM 52 O O2P FAD . . . I 2 -11.367 -19.357 17.507 1 44.19 ? O2P FAD 401 A 1 
HETATM 53 O O3P FAD . . . I 2 -8.98 -19.696 18.64 1 46.29 ? O3P FAD 401 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    41 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           53 
#