data_5WWV # _model_server_result.job_id lCESmQCKndhr9X-aP3UN7A _model_server_result.datetime_utc '2024-11-19 11:30:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wwv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":402}' # _entry.id 5WWV # _exptl.entry_id 5WWV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 217.694 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (S)-(4-chlorophenyl)-phenyl-methanamine _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WWV _cell.length_a 170.064 _cell.length_b 273.95 _cell.length_c 136.8 _cell.Z_PDB 64 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WWV _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,L,M,N,O,P,Q,R,WA,XA 1 1 C,D,S,T,U,V,W,X,Y,Z,AA,YA,ZA 2 1 E,F,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,AB,BB 3 1 G,H,NA,OA,PA,QA,RA,SA,TA,UA,VA,CB 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 T N N ? 3 X N N ? 3 IA N N ? 3 OA N N # _chem_comp.formula 'C13 H12 Cl N' _chem_comp.formula_weight 217.694 _chem_comp.id 7V3 _chem_comp.mon_nstd_flag . _chem_comp.name (S)-(4-chlorophenyl)-phenyl-methanamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C4A 7V3 sing 1 n n C4A C5A 7V3 doub 2 n y C4A C3A 7V3 sing 3 n y C5A C6A 7V3 sing 4 n y C3A C2A 7V3 doub 5 n y C6A C1A 7V3 doub 6 n y C2A C1A 7V3 sing 7 n y C1A C7 7V3 sing 8 n n N C7 7V3 sing 9 n n C7 C1B 7V3 sing 10 n n C1B C2B 7V3 doub 11 n y C1B C6B 7V3 sing 12 n y C2B C3B 7V3 sing 13 n y C6B C5B 7V3 doub 14 n y C3B C4B 7V3 doub 15 n y C5B C4B 7V3 sing 16 n y C7 H1 7V3 sing 17 n n C4B H2 7V3 sing 18 n n C5B H3 7V3 sing 19 n n C3B H4 7V3 sing 20 n n C6B H5 7V3 sing 21 n n C2B H6 7V3 sing 22 n n C5A H7 7V3 sing 23 n n C2A H8 7V3 sing 24 n n C3A H9 7V3 sing 25 n n N H10 7V3 sing 26 n n N H11 7V3 sing 27 n n C6A H13 7V3 sing 28 n n # _atom_sites.entry_id 5WWV _atom_sites.fract_transf_matrix[1][1] 0.00588 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00731 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 FAD A 1 401 401 FAD FAD . J 3 7V3 A 1 402 402 7V3 XXX . K 4 MPD A 1 403 411 MPD MPD . L 4 MPD A 1 404 412 MPD MPD . M 4 MPD A 1 405 417 MPD MPD . N 4 MPD A 1 406 418 MPD MPD . O 5 SO4 A 1 407 420 SO4 SO4 . P 2 FAD B 1 401 401 FAD FAD . Q 4 MPD B 1 402 412 MPD MPD . R 4 MPD B 1 403 414 MPD MPD . S 2 FAD C 1 401 401 FAD FAD . T 3 7V3 C 1 402 402 7V3 XXX . U 4 MPD C 1 403 412 MPD MPD . V 5 SO4 C 1 404 420 SO4 SO4 . W 2 FAD D 1 401 401 FAD FAD . X 3 7V3 D 1 402 402 7V3 XXX . Y 4 MPD D 1 403 416 MPD MPD . Z 4 MPD D 1 404 417 MPD MPD . AA 5 SO4 D 1 405 420 SO4 SO4 . BA 2 FAD E 1 401 401 FAD FAD . CA 4 MPD E 1 402 402 MPD MPD . DA 4 MPD E 1 403 411 MPD MPD . EA 4 MPD E 1 404 416 MPD MPD . FA 5 SO4 E 1 405 420 SO4 SO4 . GA 4 MPD E 1 406 418 MPD MPD . HA 2 FAD F 1 401 401 FAD FAD . IA 3 7V3 F 1 402 402 7V3 XXX . JA 4 MPD F 1 403 412 MPD MPD . KA 4 MPD F 1 404 411 MPD MPD . LA 4 MPD F 1 405 412 MPD MPD . MA 5 SO4 F 1 406 420 SO4 SO4 . NA 2 FAD G 1 401 401 FAD FAD . OA 3 7V3 G 1 402 402 7V3 XXX . PA 4 MPD G 1 403 411 MPD MPD . QA 4 MPD G 1 404 416 MPD MPD . RA 2 FAD H 1 401 401 FAD FAD . SA 4 MPD H 1 402 402 MPD MPD . TA 4 MPD H 1 403 411 MPD MPD . UA 4 MPD H 1 404 412 MPD MPD . VA 5 SO4 H 1 405 420 SO4 SO4 . WA 6 HOH A 1 501 504 HOH HOH . WA 6 HOH A 2 502 502 HOH HOH . WA 6 HOH A 3 503 506 HOH HOH . WA 6 HOH A 4 504 501 HOH HOH . WA 6 HOH A 5 505 503 HOH HOH . WA 6 HOH A 6 506 505 HOH HOH . WA 6 HOH A 7 507 507 HOH HOH . XA 6 HOH B 1 501 503 HOH HOH . XA 6 HOH B 2 502 506 HOH HOH . XA 6 HOH B 3 503 508 HOH HOH . XA 6 HOH B 4 504 507 HOH HOH . XA 6 HOH B 5 505 501 HOH HOH . XA 6 HOH B 6 506 502 HOH HOH . XA 6 HOH B 7 507 505 HOH HOH . XA 6 HOH B 8 508 504 HOH HOH . YA 6 HOH C 1 501 507 HOH HOH . YA 6 HOH C 2 502 504 HOH HOH . YA 6 HOH C 3 503 505 HOH HOH . YA 6 HOH C 4 504 503 HOH HOH . YA 6 HOH C 5 505 501 HOH HOH . YA 6 HOH C 6 506 509 HOH HOH . YA 6 HOH C 7 507 502 HOH HOH . YA 6 HOH C 8 508 508 HOH HOH . YA 6 HOH C 9 509 506 HOH HOH . ZA 6 HOH D 1 501 503 HOH HOH . ZA 6 HOH D 2 502 508 HOH HOH . ZA 6 HOH D 3 503 501 HOH HOH . ZA 6 HOH D 4 504 502 HOH HOH . ZA 6 HOH D 5 505 509 HOH HOH . ZA 6 HOH D 6 506 507 HOH HOH . ZA 6 HOH D 7 507 504 HOH HOH . ZA 6 HOH D 8 508 506 HOH HOH . ZA 6 HOH D 9 509 505 HOH HOH . AB 6 HOH E 1 501 504 HOH HOH . AB 6 HOH E 2 502 502 HOH HOH . AB 6 HOH E 3 503 503 HOH HOH . AB 6 HOH E 4 504 505 HOH HOH . AB 6 HOH E 5 505 501 HOH HOH . BB 6 HOH F 1 501 502 HOH HOH . BB 6 HOH F 2 502 501 HOH HOH . CB 6 HOH H 1 501 502 HOH HOH . CB 6 HOH H 2 502 505 HOH HOH . CB 6 HOH H 3 503 504 HOH HOH . CB 6 HOH H 4 504 503 HOH HOH . CB 6 HOH H 5 505 501 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 7V3 . . . T 3 22.591 -59.045 -10.827 1 96.52 ? C7 7V3 402 C 1 HETATM 2 C C4B 7V3 . . . T 3 24.75 -57.895 -14.543 1 107.61 ? C4B 7V3 402 C 1 HETATM 3 C C5B 7V3 . . . T 3 25.109 -57.325 -13.329 1 99.2 ? C5B 7V3 402 C 1 HETATM 4 C C3B 7V3 . . . T 3 23.701 -58.821 -14.587 1 106.42 ? C3B 7V3 402 C 1 HETATM 5 C C6B 7V3 . . . T 3 24.432 -57.674 -12.148 1 97.94 ? C6B 7V3 402 C 1 HETATM 6 C C2B 7V3 . . . T 3 23.02 -59.175 -13.405 1 102 ? C2B 7V3 402 C 1 HETATM 7 C C1B 7V3 . . . T 3 23.35 -58.613 -12.142 1 99.26 ? C1B 7V3 402 C 1 HETATM 8 C C4A 7V3 . . . T 3 24.382 -57.322 -7.377 1 117.51 ? C4A 7V3 402 C 1 HETATM 9 C C5A 7V3 . . . T 3 23.317 -56.672 -8.014 1 114.8 ? C5A 7V3 402 C 1 HETATM 10 C C1A 7V3 . . . T 3 23.184 -58.454 -9.657 1 95.74 ? C1A 7V3 402 C 1 HETATM 11 C C2A 7V3 . . . T 3 24.239 -59.066 -9.002 1 106.65 ? C2A 7V3 402 C 1 HETATM 12 C C3A 7V3 . . . T 3 24.843 -58.526 -7.873 1 116.05 ? C3A 7V3 402 C 1 HETATM 13 N N 7V3 . . . T 3 21.165 -58.783 -10.887 1 107.72 ? N 7V3 402 C 1 HETATM 14 CL CL 7V3 . . . T 3 25.131 -56.613 -5.947 1 125.34 ? CL 7V3 402 C 1 HETATM 15 C C6A 7V3 . . . T 3 22.735 -57.249 -9.149 1 101.72 ? C6A 7V3 402 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #