data_5WX2
#
_model_server_result.job_id            mRke0BYPcDs0RQK0Rlv5FQ 
_model_server_result.datetime_utc      '2024-11-14 07:11:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wx2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":401}' 
#
_entry.id    5WX2 
#
_exptl.entry_id    5WX2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5WX2 
_cell.length_a            168.402 
_cell.length_b            270.896 
_cell.length_c            135.429 
_cell.Z_PDB               64 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5WX2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,K,L,M,N,O,P,Q,R,S,SA,TA 1 1 
C,D,T,U,V,W,X,Y,Z,AA,UA,VA 2 1 
E,F,BA,CA,DA,EA,FA,GA,HA,IA,JA,WA,XA 3 1 
G,H,KA,LA,MA,NA,OA,PA,QA,RA,YA,ZA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 O N N 
? 2 T N N 
? 2 W N N 
? 2 BA N N 
? 2 EA N N 
? 2 KA N N 
? 2 OA N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     5WX2 
_atom_sites.fract_transf_matrix[1][1]    0.005938 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003691 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007384 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 FAD A 1 401 401 FAD FAD . 
J 3 MPD A 1 402 402 MPD MPD . 
K 3 MPD A 1 403 411 MPD MPD . 
L 3 MPD A 1 404 412 MPD MPD . 
M 3 MPD A 1 405 417 MPD MPD . 
N 4 SO4 A 1 406 420 SO4 SO4 . 
O 2 FAD B 1 401 401 FAD FAD . 
P 3 MPD B 1 402 402 MPD MPD . 
Q 3 MPD B 1 403 412 MPD MPD . 
R 3 MPD B 1 404 413 MPD MPD . 
S 3 MPD B 1 405 414 MPD MPD . 
T 2 FAD C 1 401 401 FAD FAD . 
U 3 MPD C 1 402 412 MPD MPD . 
V 4 SO4 C 1 403 420 SO4 SO4 . 
W 2 FAD D 1 401 401 FAD FAD . 
X 3 MPD D 1 402 402 MPD MPD . 
Y 3 MPD D 1 403 411 MPD MPD . 
Z 3 MPD D 1 404 414 MPD MPD . 
AA 4 SO4 D 1 405 420 SO4 SO4 . 
BA 2 FAD E 1 401 401 FAD FAD . 
CA 3 MPD E 1 402 402 MPD MPD . 
DA 4 SO4 E 1 403 420 SO4 SO4 . 
EA 2 FAD F 1 401 401 FAD FAD . 
FA 3 MPD F 1 402 412 MPD MPD . 
GA 3 MPD F 1 403 411 MPD MPD . 
HA 3 MPD F 1 404 412 MPD MPD . 
IA 3 MPD F 1 405 413 MPD MPD . 
JA 4 SO4 F 1 406 420 SO4 SO4 . 
KA 2 FAD G 1 401 401 FAD FAD . 
LA 3 MPD G 1 402 402 MPD MPD . 
MA 3 MPD G 1 403 411 MPD MPD . 
NA 3 MPD G 1 404 412 MPD MPD . 
OA 2 FAD H 1 401 401 FAD FAD . 
PA 3 MPD H 1 402 411 MPD MPD . 
QA 3 MPD H 1 403 412 MPD MPD . 
RA 4 SO4 H 1 404 420 SO4 SO4 . 
SA 5 HOH A 1 501 514 HOH HOH . 
SA 5 HOH A 2 502 505 HOH HOH . 
SA 5 HOH A 3 503 513 HOH HOH . 
SA 5 HOH A 4 504 516 HOH HOH . 
SA 5 HOH A 5 505 503 HOH HOH . 
SA 5 HOH A 6 506 509 HOH HOH . 
SA 5 HOH A 7 507 502 HOH HOH . 
SA 5 HOH A 8 508 515 HOH HOH . 
SA 5 HOH A 9 509 508 HOH HOH . 
SA 5 HOH A 10 510 512 HOH HOH . 
SA 5 HOH A 11 511 501 HOH HOH . 
SA 5 HOH A 12 512 519 HOH HOH . 
SA 5 HOH A 13 513 506 HOH HOH . 
SA 5 HOH A 14 514 510 HOH HOH . 
SA 5 HOH A 15 515 520 HOH HOH . 
SA 5 HOH A 16 516 511 HOH HOH . 
SA 5 HOH A 17 517 517 HOH HOH . 
SA 5 HOH A 18 518 504 HOH HOH . 
TA 5 HOH B 1 501 504 HOH HOH . 
TA 5 HOH B 2 502 505 HOH HOH . 
TA 5 HOH B 3 503 518 HOH HOH . 
TA 5 HOH B 4 504 515 HOH HOH . 
TA 5 HOH B 5 505 511 HOH HOH . 
TA 5 HOH B 6 506 510 HOH HOH . 
TA 5 HOH B 7 507 513 HOH HOH . 
TA 5 HOH B 8 508 508 HOH HOH . 
TA 5 HOH B 9 509 501 HOH HOH . 
TA 5 HOH B 10 510 514 HOH HOH . 
TA 5 HOH B 11 511 512 HOH HOH . 
TA 5 HOH B 12 512 516 HOH HOH . 
TA 5 HOH B 13 513 506 HOH HOH . 
TA 5 HOH B 14 514 520 HOH HOH . 
TA 5 HOH B 15 515 509 HOH HOH . 
TA 5 HOH B 16 516 518 HOH HOH . 
TA 5 HOH B 17 517 517 HOH HOH . 
TA 5 HOH B 18 518 502 HOH HOH . 
TA 5 HOH B 19 519 507 HOH HOH . 
TA 5 HOH B 20 520 519 HOH HOH . 
TA 5 HOH B 21 521 507 HOH HOH . 
TA 5 HOH B 22 522 503 HOH HOH . 
UA 5 HOH C 1 501 504 HOH HOH . 
UA 5 HOH C 2 502 501 HOH HOH . 
UA 5 HOH C 3 503 503 HOH HOH . 
UA 5 HOH C 4 504 402 HOH HOH . 
UA 5 HOH C 5 505 502 HOH HOH . 
VA 5 HOH D 1 501 501 HOH HOH . 
VA 5 HOH D 2 502 505 HOH HOH . 
VA 5 HOH D 3 503 502 HOH HOH . 
VA 5 HOH D 4 504 504 HOH HOH . 
VA 5 HOH D 5 505 508 HOH HOH . 
VA 5 HOH D 6 506 506 HOH HOH . 
VA 5 HOH D 7 507 507 HOH HOH . 
VA 5 HOH D 8 508 510 HOH HOH . 
VA 5 HOH D 9 509 503 HOH HOH . 
VA 5 HOH D 10 510 509 HOH HOH . 
WA 5 HOH E 1 501 501 HOH HOH . 
WA 5 HOH E 2 502 504 HOH HOH . 
WA 5 HOH E 3 503 502 HOH HOH . 
WA 5 HOH E 4 504 503 HOH HOH . 
XA 5 HOH F 1 501 501 HOH HOH . 
XA 5 HOH F 2 502 402 HOH HOH . 
YA 5 HOH G 1 501 503 HOH HOH . 
YA 5 HOH G 2 502 504 HOH HOH . 
YA 5 HOH G 3 503 501 HOH HOH . 
YA 5 HOH G 4 504 502 HOH HOH . 
ZA 5 HOH H 1 501 501 HOH HOH . 
ZA 5 HOH H 2 502 502 HOH HOH . 
ZA 5 HOH H 3 503 504 HOH HOH . 
ZA 5 HOH H 4 504 503 HOH HOH . 
ZA 5 HOH H 5 505 402 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . I 2 -8.947 -17.621 19.101 1 33.13 ? PA FAD 401 A 1 
HETATM 2 O O1A FAD . . . I 2 -8.573 -16.899 17.835 1 33.35 ? O1A FAD 401 A 1 
HETATM 3 O O2A FAD . . . I 2 -7.868 -17.663 20.163 1 35.41 ? O2A FAD 401 A 1 
HETATM 4 O O5B FAD . . . I 2 -10.323 -17.02 19.683 1 31.16 ? O5B FAD 401 A 1 
HETATM 5 C C5B FAD . . . I 2 -10.596 -17.246 21.057 1 32.64 ? C5B FAD 401 A 1 
HETATM 6 C C4B FAD . . . I 2 -11.657 -16.274 21.491 1 34.51 ? C4B FAD 401 A 1 
HETATM 7 O O4B FAD . . . I 2 -12.217 -16.643 22.742 1 34.8 ? O4B FAD 401 A 1 
HETATM 8 C C3B FAD . . . I 2 -11.086 -14.888 21.692 1 35.56 ? C3B FAD 401 A 1 
HETATM 9 O O3B FAD . . . I 2 -12.047 -13.9 21.23 1 34.6 ? O3B FAD 401 A 1 
HETATM 10 C C2B FAD . . . I 2 -10.887 -14.857 23.188 1 34.09 ? C2B FAD 401 A 1 
HETATM 11 O O2B FAD . . . I 2 -10.804 -13.511 23.612 1 36.46 ? O2B FAD 401 A 1 
HETATM 12 C C1B FAD . . . I 2 -12.155 -15.536 23.65 1 34.36 ? C1B FAD 401 A 1 
HETATM 13 N N9A FAD . . . I 2 -12.281 -15.98 25.079 1 34.48 ? N9A FAD 401 A 1 
HETATM 14 C C8A FAD . . . I 2 -11.767 -17.108 25.64 1 34.18 ? C8A FAD 401 A 1 
HETATM 15 N N7A FAD . . . I 2 -12.158 -17.238 26.932 1 33.29 ? N7A FAD 401 A 1 
HETATM 16 C C5A FAD . . . I 2 -12.995 -16.213 27.191 1 33.32 ? C5A FAD 401 A 1 
HETATM 17 C C6A FAD . . . I 2 -13.852 -15.78 28.324 1 32 ? C6A FAD 401 A 1 
HETATM 18 N N6A FAD . . . I 2 -13.851 -16.512 29.445 1 32.93 ? N6A FAD 401 A 1 
HETATM 19 N N1A FAD . . . I 2 -14.61 -14.663 28.231 1 30.51 ? N1A FAD 401 A 1 
HETATM 20 C C2A FAD . . . I 2 -14.609 -13.963 27.096 1 33.7 ? C2A FAD 401 A 1 
HETATM 21 N N3A FAD . . . I 2 -13.913 -14.343 25.985 1 35.37 ? N3A FAD 401 A 1 
HETATM 22 C C4A FAD . . . I 2 -13.119 -15.438 25.957 1 33.63 ? C4A FAD 401 A 1 
HETATM 23 N N1 FAD . . . I 2 -4.486 -22.508 11.297 1 29.6 ? N1 FAD 401 A 1 
HETATM 24 C C2 FAD . . . I 2 -4.562 -22.694 9.952 1 29.14 ? C2 FAD 401 A 1 
HETATM 25 O O2 FAD . . . I 2 -5.608 -23.15 9.455 1 28.66 ? O2 FAD 401 A 1 
HETATM 26 N N3 FAD . . . I 2 -3.587 -22.322 9.11 1 30.1 ? N3 FAD 401 A 1 
HETATM 27 C C4 FAD . . . I 2 -2.442 -21.769 9.528 1 30.24 ? C4 FAD 401 A 1 
HETATM 28 O O4 FAD . . . I 2 -1.581 -21.397 8.697 1 29.77 ? O4 FAD 401 A 1 
HETATM 29 C C4X FAD . . . I 2 -2.255 -21.595 10.99 1 29.57 ? C4X FAD 401 A 1 
HETATM 30 N N5 FAD . . . I 2 -1.125 -21.104 11.501 1 29.99 ? N5 FAD 401 A 1 
HETATM 31 C C5X FAD . . . I 2 -0.966 -20.923 12.83 1 31.27 ? C5X FAD 401 A 1 
HETATM 32 C C6 FAD . . . I 2 0.221 -20.336 13.277 1 31.71 ? C6 FAD 401 A 1 
HETATM 33 C C7 FAD . . . I 2 0.42 -20.065 14.625 1 31.96 ? C7 FAD 401 A 1 
HETATM 34 C C7M FAD . . . I 2 1.739 -19.528 15.106 1 32.99 ? C7M FAD 401 A 1 
HETATM 35 C C8 FAD . . . I 2 -0.642 -20.391 15.605 1 33.11 ? C8 FAD 401 A 1 
HETATM 36 C C8M FAD . . . I 2 -0.362 -20.175 17.074 1 33.26 ? C8M FAD 401 A 1 
HETATM 37 C C9 FAD . . . I 2 -1.855 -20.953 15.163 1 33.02 ? C9 FAD 401 A 1 
HETATM 38 C C9A FAD . . . I 2 -2.064 -21.25 13.797 1 31.43 ? C9A FAD 401 A 1 
HETATM 39 N N10 FAD . . . I 2 -3.28 -21.768 13.264 1 30.03 ? N10 FAD 401 A 1 
HETATM 40 C C10 FAD . . . I 2 -3.381 -21.976 11.874 1 29.85 ? C10 FAD 401 A 1 
HETATM 41 C C1' FAD . . . I 2 -4.373 -22.24 14.107 1 30.39 ? C1' FAD 401 A 1 
HETATM 42 C C2' FAD . . . I 2 -5.39 -21.169 14.421 1 30.91 ? C2' FAD 401 A 1 
HETATM 43 O O2' FAD . . . I 2 -4.722 -19.972 14.87 1 31.89 ? O2' FAD 401 A 1 
HETATM 44 C C3' FAD . . . I 2 -6.329 -21.672 15.516 1 30.43 ? C3' FAD 401 A 1 
HETATM 45 O O3' FAD . . . I 2 -6.769 -23.001 15.245 1 30.45 ? O3' FAD 401 A 1 
HETATM 46 C C4' FAD . . . I 2 -7.567 -20.814 15.576 1 31.21 ? C4' FAD 401 A 1 
HETATM 47 O O4' FAD . . . I 2 -7.199 -19.437 15.726 1 30.95 ? O4' FAD 401 A 1 
HETATM 48 C C5' FAD . . . I 2 -8.49 -21.226 16.718 1 32.29 ? C5' FAD 401 A 1 
HETATM 49 O O5' FAD . . . I 2 -9.575 -20.306 16.681 1 33.61 ? O5' FAD 401 A 1 
HETATM 50 P P FAD . . . I 2 -10.41 -19.903 17.967 1 32.05 ? P FAD 401 A 1 
HETATM 51 O O1P FAD . . . I 2 -10.736 -21.257 18.537 1 33.25 ? O1P FAD 401 A 1 
HETATM 52 O O2P FAD . . . I 2 -11.504 -18.94 17.53 1 32.4 ? O2P FAD 401 A 1 
HETATM 53 O O3P FAD . . . I 2 -9.276 -19.185 18.867 1 32.3 ? O3P FAD 401 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#