data_5WXM # _model_server_result.job_id jt9d0iwjA7_fHzju7AOWjg _model_server_result.datetime_utc '2025-07-20 11:57:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wxm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":203}' # _entry.id 5WXM # _exptl.entry_id 5WXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WXM _cell.length_a 51.565 _cell.length_b 86.951 _cell.length_c 88.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 8 A VAL 32 1_555 A N MSE 9 A MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 9 A MSE 33 1_555 A N ARG 10 A ARG 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale3 A C ALA 60 A ALA 84 1_555 A N MSE 61 A MSE 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 61 A MSE 85 1_555 A N GLY 62 A GLY 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C ILE 90 A ILE 114 1_555 A N MSE 91 A MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale6 A C MSE 91 A MSE 115 1_555 A N HIS 92 A HIS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale7 A C LYS 95 A LYS 119 1_555 A N MSE 96 A MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 A C MSE 96 A MSE 120 1_555 A N ALA 97 A ALA 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 A C ASN 129 A ASN 153 1_555 A N MSE 130 A MSE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale10 A C MSE 130 A MSE 154 1_555 A N GLU 131 A GLU 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale11 C C VAL 8 B VAL 32 1_555 C N MSE 9 B MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 C C MSE 9 B MSE 33 1_555 C N ARG 10 B ARG 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale13 C C ALA 60 B ALA 84 1_555 C N MSE 61 B MSE 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale14 C C MSE 61 B MSE 85 1_555 C N GLY 62 B GLY 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 C C ILE 90 B ILE 114 1_555 C N MSE 91 B MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale16 C C MSE 91 B MSE 115 1_555 C N HIS 92 B HIS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale17 C C LYS 95 B LYS 119 1_555 C N MSE 96 B MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale18 C C MSE 96 B MSE 120 1_555 C N ALA 97 B ALA 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale19 C C ASN 129 B ASN 153 1_555 C N MSE 130 B MSE 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale20 C C MSE 130 B MSE 154 1_555 C N GLU 131 B GLU 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5WXM _atom_sites.fract_transf_matrix[1][1] 0.019393 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011271 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 201 2 SO4 SO4 . F 3 SO4 B 1 201 1 SO4 SO4 . G 3 SO4 B 1 202 3 SO4 SO4 . H 3 SO4 B 1 203 4 SO4 SO4 . I 3 SO4 V 1 501 5 SO4 SO4 . J 4 HOH A 1 301 57 HOH HOH . J 4 HOH A 2 302 83 HOH HOH . J 4 HOH A 3 303 9 HOH HOH . J 4 HOH A 4 304 52 HOH HOH . J 4 HOH A 5 305 114 HOH HOH . J 4 HOH A 6 306 182 HOH HOH . J 4 HOH A 7 307 102 HOH HOH . J 4 HOH A 8 308 92 HOH HOH . J 4 HOH A 9 309 5 HOH HOH . J 4 HOH A 10 310 191 HOH HOH . J 4 HOH A 11 311 187 HOH HOH . J 4 HOH A 12 312 146 HOH HOH . J 4 HOH A 13 313 14 HOH HOH . J 4 HOH A 14 314 36 HOH HOH . J 4 HOH A 15 315 95 HOH HOH . J 4 HOH A 16 316 84 HOH HOH . J 4 HOH A 17 317 29 HOH HOH . J 4 HOH A 18 318 37 HOH HOH . J 4 HOH A 19 319 6 HOH HOH . J 4 HOH A 20 320 7 HOH HOH . J 4 HOH A 21 321 148 HOH HOH . J 4 HOH A 22 322 50 HOH HOH . J 4 HOH A 23 323 76 HOH HOH . J 4 HOH A 24 324 82 HOH HOH . J 4 HOH A 25 325 65 HOH HOH . J 4 HOH A 26 326 48 HOH HOH . J 4 HOH A 27 327 21 HOH HOH . J 4 HOH A 28 328 138 HOH HOH . J 4 HOH A 29 329 171 HOH HOH . J 4 HOH A 30 330 151 HOH HOH . J 4 HOH A 31 331 145 HOH HOH . J 4 HOH A 32 332 44 HOH HOH . J 4 HOH A 33 333 38 HOH HOH . J 4 HOH A 34 334 73 HOH HOH . J 4 HOH A 35 335 177 HOH HOH . J 4 HOH A 36 336 164 HOH HOH . J 4 HOH A 37 337 152 HOH HOH . J 4 HOH A 38 338 135 HOH HOH . J 4 HOH A 39 339 96 HOH HOH . J 4 HOH A 40 340 69 HOH HOH . J 4 HOH A 41 341 16 HOH HOH . J 4 HOH A 42 342 80 HOH HOH . J 4 HOH A 43 343 173 HOH HOH . J 4 HOH A 44 344 12 HOH HOH . J 4 HOH A 45 345 162 HOH HOH . J 4 HOH A 46 346 121 HOH HOH . J 4 HOH A 47 347 160 HOH HOH . J 4 HOH A 48 348 142 HOH HOH . J 4 HOH A 49 349 17 HOH HOH . J 4 HOH A 50 350 168 HOH HOH . J 4 HOH A 51 351 72 HOH HOH . J 4 HOH A 52 352 174 HOH HOH . J 4 HOH A 53 353 144 HOH HOH . J 4 HOH A 54 354 150 HOH HOH . J 4 HOH A 55 355 66 HOH HOH . J 4 HOH A 56 356 24 HOH HOH . J 4 HOH A 57 357 163 HOH HOH . J 4 HOH A 58 358 99 HOH HOH . J 4 HOH A 59 359 115 HOH HOH . J 4 HOH A 60 360 118 HOH HOH . J 4 HOH A 61 361 183 HOH HOH . J 4 HOH A 62 362 159 HOH HOH . J 4 HOH A 63 363 104 HOH HOH . J 4 HOH A 64 364 63 HOH HOH . J 4 HOH A 65 365 181 HOH HOH . J 4 HOH A 66 366 165 HOH HOH . J 4 HOH A 67 367 81 HOH HOH . J 4 HOH A 68 368 161 HOH HOH . J 4 HOH A 69 369 68 HOH HOH . J 4 HOH A 70 370 124 HOH HOH . J 4 HOH A 71 371 53 HOH HOH . K 4 HOH U 1 501 11 HOH HOH . K 4 HOH U 2 502 139 HOH HOH . K 4 HOH U 3 503 56 HOH HOH . K 4 HOH U 4 504 167 HOH HOH . K 4 HOH U 5 505 101 HOH HOH . K 4 HOH U 6 506 49 HOH HOH . K 4 HOH U 7 507 190 HOH HOH . K 4 HOH U 8 508 141 HOH HOH . K 4 HOH U 9 509 79 HOH HOH . K 4 HOH U 10 510 59 HOH HOH . K 4 HOH U 11 511 117 HOH HOH . K 4 HOH U 12 512 119 HOH HOH . K 4 HOH U 13 513 132 HOH HOH . K 4 HOH U 14 514 192 HOH HOH . K 4 HOH U 15 515 116 HOH HOH . K 4 HOH U 16 516 155 HOH HOH . K 4 HOH U 17 517 67 HOH HOH . K 4 HOH U 18 518 149 HOH HOH . K 4 HOH U 19 519 170 HOH HOH . K 4 HOH U 20 520 55 HOH HOH . K 4 HOH U 21 521 100 HOH HOH . K 4 HOH U 22 522 154 HOH HOH . K 4 HOH U 23 523 147 HOH HOH . K 4 HOH U 24 524 123 HOH HOH . K 4 HOH U 25 525 88 HOH HOH . K 4 HOH U 26 526 185 HOH HOH . K 4 HOH U 27 527 91 HOH HOH . L 4 HOH B 1 301 13 HOH HOH . L 4 HOH B 2 302 2 HOH HOH . L 4 HOH B 3 303 90 HOH HOH . L 4 HOH B 4 304 41 HOH HOH . L 4 HOH B 5 305 112 HOH HOH . L 4 HOH B 6 306 122 HOH HOH . L 4 HOH B 7 307 157 HOH HOH . L 4 HOH B 8 308 166 HOH HOH . L 4 HOH B 9 309 20 HOH HOH . L 4 HOH B 10 310 85 HOH HOH . L 4 HOH B 11 311 32 HOH HOH . L 4 HOH B 12 312 120 HOH HOH . L 4 HOH B 13 313 31 HOH HOH . L 4 HOH B 14 314 97 HOH HOH . L 4 HOH B 15 315 27 HOH HOH . L 4 HOH B 16 316 153 HOH HOH . L 4 HOH B 17 317 30 HOH HOH . L 4 HOH B 18 318 19 HOH HOH . L 4 HOH B 19 319 42 HOH HOH . L 4 HOH B 20 320 134 HOH HOH . L 4 HOH B 21 321 93 HOH HOH . L 4 HOH B 22 322 87 HOH HOH . L 4 HOH B 23 323 23 HOH HOH . L 4 HOH B 24 324 10 HOH HOH . L 4 HOH B 25 325 35 HOH HOH . L 4 HOH B 26 326 143 HOH HOH . L 4 HOH B 27 327 94 HOH HOH . L 4 HOH B 28 328 4 HOH HOH . L 4 HOH B 29 329 51 HOH HOH . L 4 HOH B 30 330 126 HOH HOH . L 4 HOH B 31 331 105 HOH HOH . L 4 HOH B 32 332 186 HOH HOH . L 4 HOH B 33 333 3 HOH HOH . L 4 HOH B 34 334 47 HOH HOH . L 4 HOH B 35 335 8 HOH HOH . L 4 HOH B 36 336 180 HOH HOH . L 4 HOH B 37 337 64 HOH HOH . L 4 HOH B 38 338 33 HOH HOH . L 4 HOH B 39 339 178 HOH HOH . L 4 HOH B 40 340 71 HOH HOH . L 4 HOH B 41 341 18 HOH HOH . L 4 HOH B 42 342 22 HOH HOH . L 4 HOH B 43 343 54 HOH HOH . L 4 HOH B 44 344 131 HOH HOH . L 4 HOH B 45 345 107 HOH HOH . L 4 HOH B 46 346 89 HOH HOH . L 4 HOH B 47 347 26 HOH HOH . L 4 HOH B 48 348 109 HOH HOH . L 4 HOH B 49 349 58 HOH HOH . L 4 HOH B 50 350 62 HOH HOH . L 4 HOH B 51 351 77 HOH HOH . L 4 HOH B 52 352 175 HOH HOH . L 4 HOH B 53 353 133 HOH HOH . L 4 HOH B 54 354 25 HOH HOH . L 4 HOH B 55 355 158 HOH HOH . L 4 HOH B 56 356 75 HOH HOH . L 4 HOH B 57 357 74 HOH HOH . L 4 HOH B 58 358 60 HOH HOH . L 4 HOH B 59 359 111 HOH HOH . L 4 HOH B 60 360 70 HOH HOH . L 4 HOH B 61 361 125 HOH HOH . L 4 HOH B 62 362 169 HOH HOH . L 4 HOH B 63 363 1 HOH HOH . L 4 HOH B 64 364 137 HOH HOH . L 4 HOH B 65 365 86 HOH HOH . L 4 HOH B 66 366 46 HOH HOH . L 4 HOH B 67 367 61 HOH HOH . L 4 HOH B 68 368 179 HOH HOH . L 4 HOH B 69 369 130 HOH HOH . L 4 HOH B 70 370 98 HOH HOH . L 4 HOH B 71 371 189 HOH HOH . L 4 HOH B 72 372 106 HOH HOH . M 4 HOH V 1 601 113 HOH HOH . M 4 HOH V 2 602 127 HOH HOH . M 4 HOH V 3 603 15 HOH HOH . M 4 HOH V 4 604 110 HOH HOH . M 4 HOH V 5 605 40 HOH HOH . M 4 HOH V 6 606 34 HOH HOH . M 4 HOH V 7 607 108 HOH HOH . M 4 HOH V 8 608 78 HOH HOH . M 4 HOH V 9 609 43 HOH HOH . M 4 HOH V 10 610 156 HOH HOH . M 4 HOH V 11 611 128 HOH HOH . M 4 HOH V 12 612 176 HOH HOH . M 4 HOH V 13 613 184 HOH HOH . M 4 HOH V 14 614 188 HOH HOH . M 4 HOH V 15 615 140 HOH HOH . M 4 HOH V 16 616 103 HOH HOH . M 4 HOH V 17 617 28 HOH HOH . M 4 HOH V 18 618 39 HOH HOH . M 4 HOH V 19 619 45 HOH HOH . M 4 HOH V 20 620 172 HOH HOH . M 4 HOH V 21 621 129 HOH HOH . M 4 HOH V 22 622 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . H 3 4.75 19.591 20.455 1 47.22 ? S SO4 203 B 1 HETATM 2 O O1 SO4 . . . H 3 6.07 20.197 20.257 1 34.21 ? O1 SO4 203 B 1 HETATM 3 O O2 SO4 . . . H 3 4.306 19.032 19.172 1 51.63 ? O2 SO4 203 B 1 HETATM 4 O O3 SO4 . . . H 3 4.818 18.543 21.484 1 42.83 ? O3 SO4 203 B 1 HETATM 5 O O4 SO4 . . . H 3 3.799 20.619 20.888 1 53.77 ? O4 SO4 203 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #