data_5WYN # _model_server_result.job_id gk8Y9oVHvP2MuoVwKbQ2aQ _model_server_result.datetime_utc '2024-11-04 22:43:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wyn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 5WYN # _exptl.entry_id 5WYN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5WYN _cell.length_a 85.646 _cell.length_b 85.646 _cell.length_c 126.306 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WYN _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 218 n n O1 C6 MES sing 219 n n C2 C3 MES sing 220 n n C2 H21 MES sing 221 n n C2 H22 MES sing 222 n n C3 N4 MES sing 223 n n C3 H31 MES sing 224 n n C3 H32 MES sing 225 n n N4 C5 MES sing 226 n n N4 C7 MES sing 227 n n N4 HN4 MES sing 228 n n C5 C6 MES sing 229 n n C5 H51 MES sing 230 n n C5 H52 MES sing 231 n n C6 H61 MES sing 232 n n C6 H62 MES sing 233 n n C7 C8 MES sing 234 n n C7 H71 MES sing 235 n n C7 H72 MES sing 236 n n C8 S MES sing 237 n n C8 H81 MES sing 238 n n C8 H82 MES sing 239 n n S O1S MES doub 240 n n S O2S MES doub 241 n n S O3S MES sing 242 n n # _atom_sites.entry_id 5WYN _atom_sites.fract_transf_matrix[1][1] 0.011676 _atom_sites.fract_transf_matrix[1][2] 0.006741 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013482 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007917 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 401 1 CL CL . C 2 CL A 1 402 2 CL CL . D 2 CL A 1 403 3 CL CL . E 2 CL A 1 404 4 CL CL . F 2 CL A 1 405 5 CL CL . G 2 CL A 1 406 6 CL CL . H 3 MES A 1 407 401 MES MES . I 4 HOH A 1 501 146 HOH HOH . I 4 HOH A 2 502 106 HOH HOH . I 4 HOH A 3 503 179 HOH HOH . I 4 HOH A 4 504 93 HOH HOH . I 4 HOH A 5 505 129 HOH HOH . I 4 HOH A 6 506 136 HOH HOH . I 4 HOH A 7 507 44 HOH HOH . I 4 HOH A 8 508 137 HOH HOH . I 4 HOH A 9 509 170 HOH HOH . I 4 HOH A 10 510 54 HOH HOH . I 4 HOH A 11 511 173 HOH HOH . I 4 HOH A 12 512 177 HOH HOH . I 4 HOH A 13 513 149 HOH HOH . I 4 HOH A 14 514 13 HOH HOH . I 4 HOH A 15 515 22 HOH HOH . I 4 HOH A 16 516 158 HOH HOH . I 4 HOH A 17 517 157 HOH HOH . I 4 HOH A 18 518 172 HOH HOH . I 4 HOH A 19 519 68 HOH HOH . I 4 HOH A 20 520 29 HOH HOH . I 4 HOH A 21 521 74 HOH HOH . I 4 HOH A 22 522 58 HOH HOH . I 4 HOH A 23 523 182 HOH HOH . I 4 HOH A 24 524 11 HOH HOH . I 4 HOH A 25 525 16 HOH HOH . I 4 HOH A 26 526 31 HOH HOH . I 4 HOH A 27 527 7 HOH HOH . I 4 HOH A 28 528 34 HOH HOH . I 4 HOH A 29 529 9 HOH HOH . I 4 HOH A 30 530 144 HOH HOH . I 4 HOH A 31 531 67 HOH HOH . I 4 HOH A 32 532 163 HOH HOH . I 4 HOH A 33 533 161 HOH HOH . I 4 HOH A 34 534 103 HOH HOH . I 4 HOH A 35 535 27 HOH HOH . I 4 HOH A 36 536 127 HOH HOH . I 4 HOH A 37 537 25 HOH HOH . I 4 HOH A 38 538 92 HOH HOH . I 4 HOH A 39 539 133 HOH HOH . I 4 HOH A 40 540 77 HOH HOH . I 4 HOH A 41 541 4 HOH HOH . I 4 HOH A 42 542 154 HOH HOH . I 4 HOH A 43 543 62 HOH HOH . I 4 HOH A 44 544 178 HOH HOH . I 4 HOH A 45 545 65 HOH HOH . I 4 HOH A 46 546 35 HOH HOH . I 4 HOH A 47 547 69 HOH HOH . I 4 HOH A 48 548 36 HOH HOH . I 4 HOH A 49 549 184 HOH HOH . I 4 HOH A 50 550 175 HOH HOH . I 4 HOH A 51 551 28 HOH HOH . I 4 HOH A 52 552 8 HOH HOH . I 4 HOH A 53 553 2 HOH HOH . I 4 HOH A 54 554 12 HOH HOH . I 4 HOH A 55 555 3 HOH HOH . I 4 HOH A 56 556 37 HOH HOH . I 4 HOH A 57 557 118 HOH HOH . I 4 HOH A 58 558 145 HOH HOH . I 4 HOH A 59 559 147 HOH HOH . I 4 HOH A 60 560 5 HOH HOH . I 4 HOH A 61 561 109 HOH HOH . I 4 HOH A 62 562 48 HOH HOH . I 4 HOH A 63 563 32 HOH HOH . I 4 HOH A 64 564 148 HOH HOH . I 4 HOH A 65 565 107 HOH HOH . I 4 HOH A 66 566 30 HOH HOH . I 4 HOH A 67 567 10 HOH HOH . I 4 HOH A 68 568 14 HOH HOH . I 4 HOH A 69 569 181 HOH HOH . I 4 HOH A 70 570 15 HOH HOH . I 4 HOH A 71 571 126 HOH HOH . I 4 HOH A 72 572 75 HOH HOH . I 4 HOH A 73 573 138 HOH HOH . I 4 HOH A 74 574 23 HOH HOH . I 4 HOH A 75 575 159 HOH HOH . I 4 HOH A 76 576 117 HOH HOH . I 4 HOH A 77 577 89 HOH HOH . I 4 HOH A 78 578 112 HOH HOH . I 4 HOH A 79 579 85 HOH HOH . I 4 HOH A 80 580 167 HOH HOH . I 4 HOH A 81 581 111 HOH HOH . I 4 HOH A 82 582 21 HOH HOH . I 4 HOH A 83 583 26 HOH HOH . I 4 HOH A 84 584 95 HOH HOH . I 4 HOH A 85 585 141 HOH HOH . I 4 HOH A 86 586 41 HOH HOH . I 4 HOH A 87 587 63 HOH HOH . I 4 HOH A 88 588 33 HOH HOH . I 4 HOH A 89 589 1 HOH HOH . I 4 HOH A 90 590 18 HOH HOH . I 4 HOH A 91 591 87 HOH HOH . I 4 HOH A 92 592 19 HOH HOH . I 4 HOH A 93 593 47 HOH HOH . I 4 HOH A 94 594 17 HOH HOH . I 4 HOH A 95 595 115 HOH HOH . I 4 HOH A 96 596 43 HOH HOH . I 4 HOH A 97 597 6 HOH HOH . I 4 HOH A 98 598 20 HOH HOH . I 4 HOH A 99 599 42 HOH HOH . I 4 HOH A 100 600 24 HOH HOH . I 4 HOH A 101 601 101 HOH HOH . I 4 HOH A 102 602 114 HOH HOH . I 4 HOH A 103 603 150 HOH HOH . I 4 HOH A 104 604 110 HOH HOH . I 4 HOH A 105 605 105 HOH HOH . I 4 HOH A 106 606 56 HOH HOH . I 4 HOH A 107 607 45 HOH HOH . I 4 HOH A 108 608 142 HOH HOH . I 4 HOH A 109 609 94 HOH HOH . I 4 HOH A 110 610 186 HOH HOH . I 4 HOH A 111 611 86 HOH HOH . I 4 HOH A 112 612 60 HOH HOH . I 4 HOH A 113 613 50 HOH HOH . I 4 HOH A 114 614 51 HOH HOH . I 4 HOH A 115 615 104 HOH HOH . I 4 HOH A 116 616 80 HOH HOH . I 4 HOH A 117 617 59 HOH HOH . I 4 HOH A 118 618 165 HOH HOH . I 4 HOH A 119 619 61 HOH HOH . I 4 HOH A 120 620 64 HOH HOH . I 4 HOH A 121 621 100 HOH HOH . I 4 HOH A 122 622 79 HOH HOH . I 4 HOH A 123 623 113 HOH HOH . I 4 HOH A 124 624 102 HOH HOH . I 4 HOH A 125 625 73 HOH HOH . I 4 HOH A 126 626 83 HOH HOH . I 4 HOH A 127 627 121 HOH HOH . I 4 HOH A 128 628 53 HOH HOH . I 4 HOH A 129 629 119 HOH HOH . I 4 HOH A 130 630 49 HOH HOH . I 4 HOH A 131 631 81 HOH HOH . I 4 HOH A 132 632 153 HOH HOH . I 4 HOH A 133 633 171 HOH HOH . I 4 HOH A 134 634 168 HOH HOH . I 4 HOH A 135 635 82 HOH HOH . I 4 HOH A 136 636 128 HOH HOH . I 4 HOH A 137 637 91 HOH HOH . I 4 HOH A 138 638 134 HOH HOH . I 4 HOH A 139 639 152 HOH HOH . I 4 HOH A 140 640 164 HOH HOH . I 4 HOH A 141 641 124 HOH HOH . I 4 HOH A 142 642 180 HOH HOH . I 4 HOH A 143 643 38 HOH HOH . I 4 HOH A 144 644 151 HOH HOH . I 4 HOH A 145 645 120 HOH HOH . I 4 HOH A 146 646 166 HOH HOH . I 4 HOH A 147 647 187 HOH HOH . I 4 HOH A 148 648 140 HOH HOH . I 4 HOH A 149 649 139 HOH HOH . I 4 HOH A 150 650 116 HOH HOH . I 4 HOH A 151 651 78 HOH HOH . I 4 HOH A 152 652 156 HOH HOH . I 4 HOH A 153 653 55 HOH HOH . I 4 HOH A 154 654 131 HOH HOH . I 4 HOH A 155 655 176 HOH HOH . I 4 HOH A 156 656 84 HOH HOH . I 4 HOH A 157 657 46 HOH HOH . I 4 HOH A 158 658 70 HOH HOH . I 4 HOH A 159 659 122 HOH HOH . I 4 HOH A 160 660 39 HOH HOH . I 4 HOH A 161 661 76 HOH HOH . I 4 HOH A 162 662 96 HOH HOH . I 4 HOH A 163 663 130 HOH HOH . I 4 HOH A 164 664 123 HOH HOH . I 4 HOH A 165 665 90 HOH HOH . I 4 HOH A 166 666 57 HOH HOH . I 4 HOH A 167 667 66 HOH HOH . I 4 HOH A 168 668 52 HOH HOH . I 4 HOH A 169 669 143 HOH HOH . I 4 HOH A 170 670 72 HOH HOH . I 4 HOH A 171 671 40 HOH HOH . I 4 HOH A 172 672 125 HOH HOH . I 4 HOH A 173 673 169 HOH HOH . I 4 HOH A 174 674 98 HOH HOH . I 4 HOH A 175 675 71 HOH HOH . I 4 HOH A 176 676 162 HOH HOH . I 4 HOH A 177 677 135 HOH HOH . I 4 HOH A 178 678 132 HOH HOH . I 4 HOH A 179 679 88 HOH HOH . I 4 HOH A 180 680 183 HOH HOH . I 4 HOH A 181 681 108 HOH HOH . I 4 HOH A 182 682 174 HOH HOH . I 4 HOH A 183 683 155 HOH HOH . I 4 HOH A 184 684 99 HOH HOH . I 4 HOH A 185 685 185 HOH HOH . I 4 HOH A 186 686 97 HOH HOH . I 4 HOH A 187 687 160 HOH HOH . I 4 HOH A 188 688 188 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . H 3 -35.08 22.792 15.583 1 25.39 ? O1 MES 407 A 1 HETATM 2 C C2 MES . . . H 3 -35.537 24.116 15.284 1 27.7 ? C2 MES 407 A 1 HETATM 3 C C3 MES . . . H 3 -35.027 24.601 13.919 1 26.21 ? C3 MES 407 A 1 HETATM 4 N N4 MES . . . H 3 -33.584 24.386 13.807 1 27.83 ? N4 MES 407 A 1 HETATM 5 C C5 MES . . . H 3 -33.034 23.104 14.285 1 26.25 ? C5 MES 407 A 1 HETATM 6 C C6 MES . . . H 3 -33.659 22.727 15.632 1 25.78 ? C6 MES 407 A 1 HETATM 7 C C7 MES . . . H 3 -32.99 24.851 12.543 1 29.53 ? C7 MES 407 A 1 HETATM 8 C C8 MES . . . H 3 -32.463 26.288 12.613 1 29.98 ? C8 MES 407 A 1 HETATM 9 S S MES . . . H 3 -31.49 26.64 11.277 1 28.5 ? S MES 407 A 1 HETATM 10 O O1S MES . . . H 3 -31.54 25.549 10.268 1 31.76 ? O1S MES 407 A 1 HETATM 11 O O2S MES . . . H 3 -31.904 27.905 10.622 1 32.06 ? O2S MES 407 A 1 HETATM 12 O O3S MES . . . H 3 -30.125 26.814 11.81 1 30.28 ? O3S MES 407 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #