data_5WZT # _model_server_result.job_id bpvkI16hLzfx5sTcQtYJeA _model_server_result.datetime_utc '2024-11-26 05:31:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wzt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 5WZT # _exptl.entry_id 5WZT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.263 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[1-[(3-bromophenyl)methyl]-2-methyl-3-oxamoyl-indol-4-yl]oxyethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WZT _cell.length_a 48.93 _cell.length_b 60.676 _cell.length_c 63.379 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WZT _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 25 A CYS 25 1_555 A SG CYS 116 A CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 27 A CYS 27 1_555 A SG CYS 43 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 42 A CYS 42 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 A SG CYS 48 A CYS 48 1_555 A SG CYS 123 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf5 A SG CYS 49 A CYS 49 1_555 A SG CYS 89 A CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? disulf ? disulf6 A SG CYS 58 A CYS 58 1_555 A SG CYS 82 A CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 A SG CYS 76 A CYS 76 1_555 A SG CYS 87 A CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc1 A O TYR 26 A TYR 26 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc2 A O GLY 28 A GLY 28 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc3 A O GLY 30 A GLY 30 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc4 A OD1 ASP 47 A ASP 47 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc5 A OD2 ASP 47 A ASP 47 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.019 ? metalc ? metalc6 B CA CA . A CA 201 1_555 E OAS 7W6 . A 7W6 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? # _chem_comp.formula 'C20 H17 Br N2 O5' _chem_comp.formula_weight 445.263 _chem_comp.id 7W6 _chem_comp.mon_nstd_flag . _chem_comp.name '2-[1-[(3-bromophenyl)methyl]-2-methyl-3-oxamoyl-indol-4-yl]oxyethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAR CAP 7W6 sing 1 n n OAS CAP 7W6 doub 2 n n CAT CAH 7W6 sing 3 n n CAP CAO 7W6 sing 4 n n CAO OAQ 7W6 doub 5 n n CAO CAI 7W6 sing 6 n n CAH CAI 7W6 doub 7 n y CAH NAG 7W6 sing 8 n y CAI CAF 7W6 sing 9 n y NAG CAU 7W6 sing 10 n n NAG CAE 7W6 sing 11 n y CAU CAV 7W6 sing 12 n n CAF CAE 7W6 doub 13 n y CAF CAA 7W6 sing 14 n y CAE CAD 7W6 sing 15 n y OAJ CAA 7W6 sing 16 n n OAJ CAK 7W6 sing 17 n n OAM CAL 7W6 doub 18 n n CAA CAB 7W6 doub 19 n y CAV CBA 7W6 doub 20 n y CAV CAW 7W6 sing 21 n y CAD CAC 7W6 doub 22 n y CBA CAZ 7W6 sing 23 n y CAW CAX 7W6 doub 24 n y CAL CAK 7W6 sing 25 n n CAL OAN 7W6 sing 26 n n CAB CAC 7W6 sing 27 n y CAZ CAY 7W6 doub 28 n y CAZ BRB 7W6 sing 29 n n CAX CAY 7W6 sing 30 n y OAN H1 7W6 sing 31 n n CAK H2 7W6 sing 32 n n CAK H3 7W6 sing 33 n n CAB H4 7W6 sing 34 n n CAC H5 7W6 sing 35 n n CAD H6 7W6 sing 36 n n NAR H7 7W6 sing 37 n n NAR H8 7W6 sing 38 n n CAT H9 7W6 sing 39 n n CAT H10 7W6 sing 40 n n CAT H11 7W6 sing 41 n n CAU H12 7W6 sing 42 n n CAU H13 7W6 sing 43 n n CBA H14 7W6 sing 44 n n CAY H15 7W6 sing 45 n n CAX H16 7W6 sing 46 n n CAW H17 7W6 sing 47 n n # _atom_sites.entry_id 5WZT _atom_sites.fract_transf_matrix[1][1] 0.020437 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015778 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 201 1 CA CA . C 3 GOL A 1 202 2 GOL GOL . D 4 DMS A 1 203 3 DMS DMS . E 5 7W6 A 1 204 4 7W6 DRG . F 6 HOH A 1 301 7 HOH HOH . F 6 HOH A 2 302 35 HOH HOH . F 6 HOH A 3 303 13 HOH HOH . F 6 HOH A 4 304 17 HOH HOH . F 6 HOH A 5 305 8 HOH HOH . F 6 HOH A 6 306 5 HOH HOH . F 6 HOH A 7 307 2 HOH HOH . F 6 HOH A 8 308 44 HOH HOH . F 6 HOH A 9 309 32 HOH HOH . F 6 HOH A 10 310 50 HOH HOH . F 6 HOH A 11 311 38 HOH HOH . F 6 HOH A 12 312 20 HOH HOH . F 6 HOH A 13 313 36 HOH HOH . F 6 HOH A 14 314 28 HOH HOH . F 6 HOH A 15 315 6 HOH HOH . F 6 HOH A 16 316 15 HOH HOH . F 6 HOH A 17 317 45 HOH HOH . F 6 HOH A 18 318 41 HOH HOH . F 6 HOH A 19 319 14 HOH HOH . F 6 HOH A 20 320 11 HOH HOH . F 6 HOH A 21 321 40 HOH HOH . F 6 HOH A 22 322 37 HOH HOH . F 6 HOH A 23 323 16 HOH HOH . F 6 HOH A 24 324 23 HOH HOH . F 6 HOH A 25 325 25 HOH HOH . F 6 HOH A 26 326 3 HOH HOH . F 6 HOH A 27 327 39 HOH HOH . F 6 HOH A 28 328 10 HOH HOH . F 6 HOH A 29 329 18 HOH HOH . F 6 HOH A 30 330 42 HOH HOH . F 6 HOH A 31 331 46 HOH HOH . F 6 HOH A 32 332 24 HOH HOH . F 6 HOH A 33 333 49 HOH HOH . F 6 HOH A 34 334 12 HOH HOH . F 6 HOH A 35 335 27 HOH HOH . F 6 HOH A 36 336 34 HOH HOH . F 6 HOH A 37 337 4 HOH HOH . F 6 HOH A 38 338 33 HOH HOH . F 6 HOH A 39 339 29 HOH HOH . F 6 HOH A 40 340 47 HOH HOH . F 6 HOH A 41 341 26 HOH HOH . F 6 HOH A 42 342 22 HOH HOH . F 6 HOH A 43 343 30 HOH HOH . F 6 HOH A 44 344 19 HOH HOH . F 6 HOH A 45 345 1 HOH HOH . F 6 HOH A 46 346 21 HOH HOH . F 6 HOH A 47 347 43 HOH HOH . F 6 HOH A 48 348 31 HOH HOH . F 6 HOH A 49 349 9 HOH HOH . F 6 HOH A 50 350 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAM 7W6 . . . E 5 -19.278 -14.023 -12.382 1 57.17 ? OAM 7W6 204 A 1 HETATM 2 C CAL 7W6 . . . E 5 -18.556 -14.709 -11.622 1 59.15 ? CAL 7W6 204 A 1 HETATM 3 O OAN 7W6 . . . E 5 -18.943 -15.724 -10.99 1 62.81 ? OAN 7W6 204 A 1 HETATM 4 C CAK 7W6 . . . E 5 -17.061 -14.318 -11.475 1 55.08 ? CAK 7W6 204 A 1 HETATM 5 O OAJ 7W6 . . . E 5 -16.603 -13.481 -12.579 1 51.1 ? OAJ 7W6 204 A 1 HETATM 6 C CAA 7W6 . . . E 5 -16.141 -12.199 -12.34 1 49.85 ? CAA 7W6 204 A 1 HETATM 7 C CAB 7W6 . . . E 5 -16.822 -11.374 -11.43 1 49.67 ? CAB 7W6 204 A 1 HETATM 8 C CAC 7W6 . . . E 5 -16.357 -10.096 -11.209 1 48.59 ? CAC 7W6 204 A 1 HETATM 9 C CAD 7W6 . . . E 5 -15.236 -9.682 -11.917 1 49.12 ? CAD 7W6 204 A 1 HETATM 10 C CAE 7W6 . . . E 5 -14.608 -10.489 -12.784 1 47.71 ? CAE 7W6 204 A 1 HETATM 11 C CAF 7W6 . . . E 5 -15.037 -11.75 -13.013 1 47.18 ? CAF 7W6 204 A 1 HETATM 12 C CAI 7W6 . . . E 5 -14.188 -12.262 -13.948 1 45.79 ? CAI 7W6 204 A 1 HETATM 13 C CAO 7W6 . . . E 5 -14.222 -13.492 -14.511 1 44.46 ? CAO 7W6 204 A 1 HETATM 14 O OAQ 7W6 . . . E 5 -13.279 -14.285 -14.507 1 46.18 ? OAQ 7W6 204 A 1 HETATM 15 C CAP 7W6 . . . E 5 -15.503 -13.882 -15.235 1 39.11 ? CAP 7W6 204 A 1 HETATM 16 O OAS 7W6 . . . E 5 -16.454 -13.117 -15.317 1 41.35 ? OAS 7W6 204 A 1 HETATM 17 N NAR 7W6 . . . E 5 -15.541 -15.112 -15.684 1 37.3 ? NAR 7W6 204 A 1 HETATM 18 C CAH 7W6 . . . E 5 -13.285 -11.341 -14.246 1 46.84 ? CAH 7W6 204 A 1 HETATM 19 C CAT 7W6 . . . E 5 -12.139 -11.54 -15.246 1 46.64 ? CAT 7W6 204 A 1 HETATM 20 N NAG 7W6 . . . E 5 -13.531 -10.235 -13.537 1 50.82 ? NAG 7W6 204 A 1 HETATM 21 C CAU 7W6 . . . E 5 -12.759 -8.907 -13.508 1 52.15 ? CAU 7W6 204 A 1 HETATM 22 C CAV 7W6 . . . E 5 -12.014 -8.776 -12.3 1 56.57 ? CAV 7W6 204 A 1 HETATM 23 C CBA 7W6 . . . E 5 -11.835 -7.516 -11.694 1 57.34 ? CBA 7W6 204 A 1 HETATM 24 C CAZ 7W6 . . . E 5 -11.102 -7.388 -10.501 1 60.28 ? CAZ 7W6 204 A 1 HETATM 25 BR BRB 7W6 . . . E 5 -10.842 -5.698 -9.65 1 67.31 ? BRB 7W6 204 A 1 HETATM 26 C CAY 7W6 . . . E 5 -10.546 -8.51 -9.898 1 56.31 ? CAY 7W6 204 A 1 HETATM 27 C CAX 7W6 . . . E 5 -10.719 -9.757 -10.479 1 57.32 ? CAX 7W6 204 A 1 HETATM 28 C CAW 7W6 . . . E 5 -11.439 -9.897 -11.668 1 57.77 ? CAW 7W6 204 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #