data_5X0G
#
_model_server_result.job_id            pucFKC5CFAwGL_v4QT7C3g 
_model_server_result.datetime_utc      '2024-12-01 05:17:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5x0g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    5X0G 
#
_exptl.entry_id    5X0G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5X0G 
_cell.length_a            39.766 
_cell.length_b            69.745 
_cell.length_c            87.159 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5X0G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 101 n n 
P O2P AMP sing 102 n n 
P O3P AMP sing 103 n n 
P O5' AMP sing 104 n n 
O2P HOP2 AMP sing 105 n n 
O3P HOP3 AMP sing 106 n n 
O5' C5' AMP sing 107 n n 
C5' C4' AMP sing 108 n n 
C5' "H5'1" AMP sing 109 n n 
C5' "H5'2" AMP sing 110 n n 
C4' O4' AMP sing 111 n n 
C4' C3' AMP sing 112 n n 
C4' H4' AMP sing 113 n n 
O4' C1' AMP sing 114 n n 
C3' O3' AMP sing 115 n n 
C3' C2' AMP sing 116 n n 
C3' H3' AMP sing 117 n n 
O3' HO3' AMP sing 118 n n 
C2' O2' AMP sing 119 n n 
C2' C1' AMP sing 120 n n 
C2' H2' AMP sing 121 n n 
O2' HO2' AMP sing 122 n n 
C1' N9 AMP sing 123 n n 
C1' H1' AMP sing 124 n n 
N9 C8 AMP sing 125 n y 
N9 C4 AMP sing 126 n y 
C8 N7 AMP doub 127 n y 
C8 H8 AMP sing 128 n n 
N7 C5 AMP sing 129 n y 
C5 C6 AMP sing 130 n y 
C5 C4 AMP doub 131 n y 
C6 N6 AMP sing 132 n n 
C6 N1 AMP doub 133 n y 
N6 HN61 AMP sing 134 n n 
N6 HN62 AMP sing 135 n n 
N1 C2 AMP sing 136 n y 
C2 N3 AMP doub 137 n y 
C2 H2 AMP sing 138 n n 
N3 C4 AMP sing 139 n y 
#
_atom_sites.entry_id                     5X0G 
_atom_sites.fract_transf_matrix[1][1]    0.025147 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014338 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011473 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AMP A 1 301 301 AMP AMP . 
C 3 ADP A 1 302 302 ADP ADP . 
D 4 7WF A 1 303 1 7WF 250 . 
E 5 HOH A 1 401 31 HOH HOH . 
E 5 HOH A 2 402 48 HOH HOH . 
E 5 HOH A 3 403 19 HOH HOH . 
E 5 HOH A 4 404 27 HOH HOH . 
E 5 HOH A 5 405 16 HOH HOH . 
E 5 HOH A 6 406 13 HOH HOH . 
E 5 HOH A 7 407 30 HOH HOH . 
E 5 HOH A 8 408 32 HOH HOH . 
E 5 HOH A 9 409 74 HOH HOH . 
E 5 HOH A 10 410 70 HOH HOH . 
E 5 HOH A 11 411 45 HOH HOH . 
E 5 HOH A 12 412 38 HOH HOH . 
E 5 HOH A 13 413 22 HOH HOH . 
E 5 HOH A 14 414 26 HOH HOH . 
E 5 HOH A 15 415 15 HOH HOH . 
E 5 HOH A 16 416 63 HOH HOH . 
E 5 HOH A 17 417 12 HOH HOH . 
E 5 HOH A 18 418 18 HOH HOH . 
E 5 HOH A 19 419 2 HOH HOH . 
E 5 HOH A 20 420 4 HOH HOH . 
E 5 HOH A 21 421 50 HOH HOH . 
E 5 HOH A 22 422 43 HOH HOH . 
E 5 HOH A 23 423 75 HOH HOH . 
E 5 HOH A 24 424 72 HOH HOH . 
E 5 HOH A 25 425 8 HOH HOH . 
E 5 HOH A 26 426 58 HOH HOH . 
E 5 HOH A 27 427 33 HOH HOH . 
E 5 HOH A 28 428 52 HOH HOH . 
E 5 HOH A 29 429 6 HOH HOH . 
E 5 HOH A 30 430 62 HOH HOH . 
E 5 HOH A 31 431 51 HOH HOH . 
E 5 HOH A 32 432 40 HOH HOH . 
E 5 HOH A 33 433 66 HOH HOH . 
E 5 HOH A 34 434 5 HOH HOH . 
E 5 HOH A 35 435 36 HOH HOH . 
E 5 HOH A 36 436 68 HOH HOH . 
E 5 HOH A 37 437 54 HOH HOH . 
E 5 HOH A 38 438 11 HOH HOH . 
E 5 HOH A 39 439 25 HOH HOH . 
E 5 HOH A 40 440 35 HOH HOH . 
E 5 HOH A 41 441 17 HOH HOH . 
E 5 HOH A 42 442 21 HOH HOH . 
E 5 HOH A 43 443 67 HOH HOH . 
E 5 HOH A 44 444 23 HOH HOH . 
E 5 HOH A 45 445 60 HOH HOH . 
E 5 HOH A 46 446 24 HOH HOH . 
E 5 HOH A 47 447 37 HOH HOH . 
E 5 HOH A 48 448 29 HOH HOH . 
E 5 HOH A 49 449 7 HOH HOH . 
E 5 HOH A 50 450 14 HOH HOH . 
E 5 HOH A 51 451 61 HOH HOH . 
E 5 HOH A 52 452 10 HOH HOH . 
E 5 HOH A 53 453 71 HOH HOH . 
E 5 HOH A 54 454 3 HOH HOH . 
E 5 HOH A 55 455 56 HOH HOH . 
E 5 HOH A 56 456 9 HOH HOH . 
E 5 HOH A 57 457 49 HOH HOH . 
E 5 HOH A 58 458 73 HOH HOH . 
E 5 HOH A 59 459 57 HOH HOH . 
E 5 HOH A 60 460 53 HOH HOH . 
E 5 HOH A 61 461 28 HOH HOH . 
E 5 HOH A 62 462 59 HOH HOH . 
E 5 HOH A 63 463 34 HOH HOH . 
E 5 HOH A 64 464 47 HOH HOH . 
E 5 HOH A 65 465 64 HOH HOH . 
E 5 HOH A 66 466 69 HOH HOH . 
E 5 HOH A 67 467 44 HOH HOH . 
E 5 HOH A 68 468 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . A . B 2 3.733 13.812 10.54 0.5 17.16 ? P AMP 301 A 1 
HETATM 2 O O1P AMP . A . B 2 4.483 12.953 9.552 0.5 16.48 ? O1P AMP 301 A 1 
HETATM 3 O O2P AMP . A . B 2 3.937 13.479 11.995 0.5 16.96 ? O2P AMP 301 A 1 
HETATM 4 O O3P AMP . A . B 2 3.821 15.28 10.195 0.5 17.21 ? O3P AMP 301 A 1 
HETATM 5 O O5' AMP . A . B 2 2.195 13.395 10.312 0.5 16.98 ? O5' AMP 301 A 1 
HETATM 6 C C5' AMP . A . B 2 1.786 12.83 9.075 0.5 17.17 ? C5' AMP 301 A 1 
HETATM 7 C C4' AMP . A . B 2 1.667 13.957 8.07 0.5 17.24 ? C4' AMP 301 A 1 
HETATM 8 O O4' AMP . A . B 2 1.776 13.452 6.746 0.5 17.25 ? O4' AMP 301 A 1 
HETATM 9 C C3' AMP . A . B 2 0.329 14.679 8.157 0.5 17.42 ? C3' AMP 301 A 1 
HETATM 10 O O3' AMP . A . B 2 0.519 15.995 8.681 0.5 17.94 ? O3' AMP 301 A 1 
HETATM 11 C C2' AMP . A . B 2 -0.206 14.719 6.739 0.5 17.3 ? C2' AMP 301 A 1 
HETATM 12 O O2' AMP . A . B 2 -0.635 16.027 6.349 0.5 17.49 ? O2' AMP 301 A 1 
HETATM 13 C C1' AMP . A . B 2 0.968 14.256 5.895 0.5 16.98 ? C1' AMP 301 A 1 
HETATM 14 N N9 AMP . A . B 2 0.546 13.475 4.717 0.5 16.7 ? N9 AMP 301 A 1 
HETATM 15 C C8 AMP . A . B 2 -0.682 12.985 4.466 0.5 16.29 ? C8 AMP 301 A 1 
HETATM 16 N N7 AMP . A . B 2 -0.688 12.319 3.287 0.5 16.11 ? N7 AMP 301 A 1 
HETATM 17 C C5 AMP . A . B 2 0.554 12.388 2.771 0.5 16.18 ? C5 AMP 301 A 1 
HETATM 18 C C6 AMP . A . B 2 1.24 11.905 1.56 0.5 16.08 ? C6 AMP 301 A 1 
HETATM 19 N N6 AMP . A . B 2 0.585 11.19 0.616 0.5 15.89 ? N6 AMP 301 A 1 
HETATM 20 N N1 AMP . A . B 2 2.552 12.204 1.431 0.5 15.82 ? N1 AMP 301 A 1 
HETATM 21 C C2 AMP . A . B 2 3.236 12.909 2.349 0.5 15.94 ? C2 AMP 301 A 1 
HETATM 22 N N3 AMP . A . B 2 2.672 13.381 3.468 0.5 16.28 ? N3 AMP 301 A 1 
HETATM 23 C C4 AMP . A . B 2 1.362 13.154 3.722 0.5 16.32 ? C4 AMP 301 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           23 
#