data_5X0G # _model_server_result.job_id 4CqClD-4Vn9fCuYLRZY6zg _model_server_result.datetime_utc '2024-11-08 19:43:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x0g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 5X0G # _exptl.entry_id 5X0G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 362.42 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-hydroxy-3-[4-(2-hydroxy-3-sulfopropyl)piperazin-1-yl]propane-1-sulfonic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5X0G _cell.length_a 39.766 _cell.length_b 69.745 _cell.length_c 87.159 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X0G _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22 N2 O8 S2' _chem_comp.formula_weight 362.42 _chem_comp.id 7WF _chem_comp.mon_nstd_flag . _chem_comp.name '2-hydroxy-3-[4-(2-hydroxy-3-sulfopropyl)piperazin-1-yl]propane-1-sulfonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPSO # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 C6 7WF sing 1 n n N2 C5 7WF sing 2 n n C6 C7 7WF sing 3 n n C5 C4 7WF sing 4 n n C7 N1 7WF sing 5 n n C4 N1 7WF sing 6 n n N1 C3 7WF sing 7 n n C3 C2 7WF sing 8 n n C2 O4 7WF sing 9 n n C2 C1 7WF sing 10 n n O2 S1 7WF doub 11 n n C1 S1 7WF sing 12 n n S1 O1 7WF doub 13 n n S1 O3 7WF sing 14 n n C1 H1 7WF sing 15 n n C1 H2 7WF sing 16 n n C2 H3 7WF sing 17 n n O4 H4 7WF sing 18 n n C3 H5 7WF sing 19 n n C3 H6 7WF sing 20 n n C7 H8 7WF sing 21 n n C7 H9 7WF sing 22 n n C6 H10 7WF sing 23 n n C6 H11 7WF sing 24 n n C5 H14 7WF sing 25 n n C5 H15 7WF sing 26 n n C4 H16 7WF sing 27 n n C4 H17 7WF sing 28 n n N2 C8 7WF sing 29 n n C8 C9 7WF sing 30 n n C9 C10 7WF sing 31 n n C10 S2 7WF sing 32 n n C9 O5 7WF sing 33 n n S2 O7 7WF doub 34 n n S2 O8 7WF sing 35 n n S2 O6 7WF doub 36 n n O3 H18 7WF sing 37 n n C8 H7 7WF sing 38 n n C8 H12 7WF sing 39 n n C9 H13 7WF sing 40 n n C10 H19 7WF sing 41 n n C10 H20 7WF sing 42 n n O5 H21 7WF sing 43 n n O8 H22 7WF sing 44 n n # _atom_sites.entry_id 5X0G _atom_sites.fract_transf_matrix[1][1] 0.025147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014338 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AMP A 1 301 301 AMP AMP . C 3 ADP A 1 302 302 ADP ADP . D 4 7WF A 1 303 1 7WF 250 . E 5 HOH A 1 401 31 HOH HOH . E 5 HOH A 2 402 48 HOH HOH . E 5 HOH A 3 403 19 HOH HOH . E 5 HOH A 4 404 27 HOH HOH . E 5 HOH A 5 405 16 HOH HOH . E 5 HOH A 6 406 13 HOH HOH . E 5 HOH A 7 407 30 HOH HOH . E 5 HOH A 8 408 32 HOH HOH . E 5 HOH A 9 409 74 HOH HOH . E 5 HOH A 10 410 70 HOH HOH . E 5 HOH A 11 411 45 HOH HOH . E 5 HOH A 12 412 38 HOH HOH . E 5 HOH A 13 413 22 HOH HOH . E 5 HOH A 14 414 26 HOH HOH . E 5 HOH A 15 415 15 HOH HOH . E 5 HOH A 16 416 63 HOH HOH . E 5 HOH A 17 417 12 HOH HOH . E 5 HOH A 18 418 18 HOH HOH . E 5 HOH A 19 419 2 HOH HOH . E 5 HOH A 20 420 4 HOH HOH . E 5 HOH A 21 421 50 HOH HOH . E 5 HOH A 22 422 43 HOH HOH . E 5 HOH A 23 423 75 HOH HOH . E 5 HOH A 24 424 72 HOH HOH . E 5 HOH A 25 425 8 HOH HOH . E 5 HOH A 26 426 58 HOH HOH . E 5 HOH A 27 427 33 HOH HOH . E 5 HOH A 28 428 52 HOH HOH . E 5 HOH A 29 429 6 HOH HOH . E 5 HOH A 30 430 62 HOH HOH . E 5 HOH A 31 431 51 HOH HOH . E 5 HOH A 32 432 40 HOH HOH . E 5 HOH A 33 433 66 HOH HOH . E 5 HOH A 34 434 5 HOH HOH . E 5 HOH A 35 435 36 HOH HOH . E 5 HOH A 36 436 68 HOH HOH . E 5 HOH A 37 437 54 HOH HOH . E 5 HOH A 38 438 11 HOH HOH . E 5 HOH A 39 439 25 HOH HOH . E 5 HOH A 40 440 35 HOH HOH . E 5 HOH A 41 441 17 HOH HOH . E 5 HOH A 42 442 21 HOH HOH . E 5 HOH A 43 443 67 HOH HOH . E 5 HOH A 44 444 23 HOH HOH . E 5 HOH A 45 445 60 HOH HOH . E 5 HOH A 46 446 24 HOH HOH . E 5 HOH A 47 447 37 HOH HOH . E 5 HOH A 48 448 29 HOH HOH . E 5 HOH A 49 449 7 HOH HOH . E 5 HOH A 50 450 14 HOH HOH . E 5 HOH A 51 451 61 HOH HOH . E 5 HOH A 52 452 10 HOH HOH . E 5 HOH A 53 453 71 HOH HOH . E 5 HOH A 54 454 3 HOH HOH . E 5 HOH A 55 455 56 HOH HOH . E 5 HOH A 56 456 9 HOH HOH . E 5 HOH A 57 457 49 HOH HOH . E 5 HOH A 58 458 73 HOH HOH . E 5 HOH A 59 459 57 HOH HOH . E 5 HOH A 60 460 53 HOH HOH . E 5 HOH A 61 461 28 HOH HOH . E 5 HOH A 62 462 59 HOH HOH . E 5 HOH A 63 463 34 HOH HOH . E 5 HOH A 64 464 47 HOH HOH . E 5 HOH A 65 465 64 HOH HOH . E 5 HOH A 66 466 69 HOH HOH . E 5 HOH A 67 467 44 HOH HOH . E 5 HOH A 68 468 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 7WF . . . D 4 19.462 14.456 -4.021 1 28.45 ? O1 7WF 303 A 1 HETATM 2 S S1 7WF . . . D 4 18.455 13.477 -4.32 1 27.76 ? S1 7WF 303 A 1 HETATM 3 O O2 7WF . . . D 4 18.896 12.69 -5.434 1 29.63 ? O2 7WF 303 A 1 HETATM 4 O O3 7WF . . . D 4 18.218 12.569 -2.991 1 25.85 ? O3 7WF 303 A 1 HETATM 5 C C1 7WF . . . D 4 16.996 14.191 -4.712 1 27.66 ? C1 7WF 303 A 1 HETATM 6 C C2 7WF . . . D 4 17.17 15.385 -5.645 1 27.8 ? C2 7WF 303 A 1 HETATM 7 O O4 7WF . . . D 4 17.522 16.518 -4.85 1 27.29 ? O4 7WF 303 A 1 HETATM 8 C C3 7WF . . . D 4 15.87 15.662 -6.4 1 28.4 ? C3 7WF 303 A 1 HETATM 9 N N1 7WF . . . D 4 15.848 16.966 -7.099 1 29.86 ? N1 7WF 303 A 1 HETATM 10 C C7 7WF . . . D 4 16.758 16.961 -8.264 1 30.15 ? C7 7WF 303 A 1 HETATM 11 C C6 7WF . . . D 4 16.744 18.325 -8.952 1 30.88 ? C6 7WF 303 A 1 HETATM 12 N N2 7WF . . . D 4 15.385 18.677 -9.396 1 30.87 ? N2 7WF 303 A 1 HETATM 13 C C5 7WF . . . D 4 14.404 18.595 -8.295 1 30.26 ? C5 7WF 303 A 1 HETATM 14 C C4 7WF . . . D 4 14.477 17.246 -7.571 1 29.78 ? C4 7WF 303 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #