data_5X16 # _model_server_result.job_id rnMptrLqe9Sim2Sbo4DcTQ _model_server_result.datetime_utc '2024-11-18 04:32:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x16 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5X16 # _exptl.entry_id 5X16 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 74.122 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TERTIARY-BUTYL ALCOHOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5X16 _cell.length_a 42.565 _cell.length_b 68.138 _cell.length_c 117.314 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X16 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 139 A CYS 139 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc2 A SG CYS 142 A CYS 142 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc3 A SG CYS 164 A CYS 164 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc4 A SG CYS 175 A CYS 175 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? # _chem_comp.formula 'C4 H10 O' _chem_comp.formula_weight 74.122 _chem_comp.id TBU _chem_comp.mon_nstd_flag . _chem_comp.name 'TERTIARY-BUTYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-METHYL-2-PROPANOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C TBU sing 365 n n O HO TBU sing 366 n n C C1 TBU sing 367 n n C C2 TBU sing 368 n n C C3 TBU sing 369 n n C1 H11 TBU sing 370 n n C1 H12 TBU sing 371 n n C1 H13 TBU sing 372 n n C2 H21 TBU sing 373 n n C2 H22 TBU sing 374 n n C2 H23 TBU sing 375 n n C3 H31 TBU sing 376 n n C3 H32 TBU sing 377 n n C3 H33 TBU sing 378 n n # _atom_sites.entry_id 5X16 _atom_sites.fract_transf_matrix[1][1] 0.023493 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014676 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AR6 A 1 401 1 AR6 AR6 . C 3 ZN A 1 402 1 ZN ZN . D 4 TBU A 1 403 1 TBU TBU . E 4 TBU A 1 404 2 TBU TBU . F 5 GOL A 1 405 1 GOL GOL . G 6 HOH A 1 501 217 HOH HOH . G 6 HOH A 2 502 223 HOH HOH . G 6 HOH A 3 503 178 HOH HOH . G 6 HOH A 4 504 136 HOH HOH . G 6 HOH A 5 505 101 HOH HOH . G 6 HOH A 6 506 141 HOH HOH . G 6 HOH A 7 507 52 HOH HOH . G 6 HOH A 8 508 155 HOH HOH . G 6 HOH A 9 509 191 HOH HOH . G 6 HOH A 10 510 53 HOH HOH . G 6 HOH A 11 511 41 HOH HOH . G 6 HOH A 12 512 5 HOH HOH . G 6 HOH A 13 513 220 HOH HOH . G 6 HOH A 14 514 24 HOH HOH . G 6 HOH A 15 515 13 HOH HOH . G 6 HOH A 16 516 19 HOH HOH . G 6 HOH A 17 517 135 HOH HOH . G 6 HOH A 18 518 69 HOH HOH . G 6 HOH A 19 519 76 HOH HOH . G 6 HOH A 20 520 49 HOH HOH . G 6 HOH A 21 521 96 HOH HOH . G 6 HOH A 22 522 60 HOH HOH . G 6 HOH A 23 523 98 HOH HOH . G 6 HOH A 24 524 45 HOH HOH . G 6 HOH A 25 525 152 HOH HOH . G 6 HOH A 26 526 137 HOH HOH . G 6 HOH A 27 527 79 HOH HOH . G 6 HOH A 28 528 1 HOH HOH . G 6 HOH A 29 529 59 HOH HOH . G 6 HOH A 30 530 197 HOH HOH . G 6 HOH A 31 531 132 HOH HOH . G 6 HOH A 32 532 222 HOH HOH . G 6 HOH A 33 533 104 HOH HOH . G 6 HOH A 34 534 10 HOH HOH . G 6 HOH A 35 535 30 HOH HOH . G 6 HOH A 36 536 153 HOH HOH . G 6 HOH A 37 537 145 HOH HOH . G 6 HOH A 38 538 99 HOH HOH . G 6 HOH A 39 539 148 HOH HOH . G 6 HOH A 40 540 21 HOH HOH . G 6 HOH A 41 541 66 HOH HOH . G 6 HOH A 42 542 20 HOH HOH . G 6 HOH A 43 543 58 HOH HOH . G 6 HOH A 44 544 182 HOH HOH . G 6 HOH A 45 545 106 HOH HOH . G 6 HOH A 46 546 90 HOH HOH . G 6 HOH A 47 547 129 HOH HOH . G 6 HOH A 48 548 50 HOH HOH . G 6 HOH A 49 549 4 HOH HOH . G 6 HOH A 50 550 170 HOH HOH . G 6 HOH A 51 551 81 HOH HOH . G 6 HOH A 52 552 95 HOH HOH . G 6 HOH A 53 553 71 HOH HOH . G 6 HOH A 54 554 97 HOH HOH . G 6 HOH A 55 555 203 HOH HOH . G 6 HOH A 56 556 43 HOH HOH . G 6 HOH A 57 557 123 HOH HOH . G 6 HOH A 58 558 125 HOH HOH . G 6 HOH A 59 559 37 HOH HOH . G 6 HOH A 60 560 122 HOH HOH . G 6 HOH A 61 561 8 HOH HOH . G 6 HOH A 62 562 38 HOH HOH . G 6 HOH A 63 563 65 HOH HOH . G 6 HOH A 64 564 27 HOH HOH . G 6 HOH A 65 565 47 HOH HOH . G 6 HOH A 66 566 29 HOH HOH . G 6 HOH A 67 567 67 HOH HOH . G 6 HOH A 68 568 32 HOH HOH . G 6 HOH A 69 569 201 HOH HOH . G 6 HOH A 70 570 48 HOH HOH . G 6 HOH A 71 571 35 HOH HOH . G 6 HOH A 72 572 195 HOH HOH . G 6 HOH A 73 573 6 HOH HOH . G 6 HOH A 74 574 105 HOH HOH . G 6 HOH A 75 575 12 HOH HOH . G 6 HOH A 76 576 77 HOH HOH . G 6 HOH A 77 577 78 HOH HOH . G 6 HOH A 78 578 121 HOH HOH . G 6 HOH A 79 579 33 HOH HOH . G 6 HOH A 80 580 130 HOH HOH . G 6 HOH A 81 581 157 HOH HOH . G 6 HOH A 82 582 128 HOH HOH . G 6 HOH A 83 583 87 HOH HOH . G 6 HOH A 84 584 94 HOH HOH . G 6 HOH A 85 585 72 HOH HOH . G 6 HOH A 86 586 134 HOH HOH . G 6 HOH A 87 587 112 HOH HOH . G 6 HOH A 88 588 23 HOH HOH . G 6 HOH A 89 589 34 HOH HOH . G 6 HOH A 90 590 92 HOH HOH . G 6 HOH A 91 591 42 HOH HOH . G 6 HOH A 92 592 176 HOH HOH . G 6 HOH A 93 593 88 HOH HOH . G 6 HOH A 94 594 55 HOH HOH . G 6 HOH A 95 595 39 HOH HOH . G 6 HOH A 96 596 22 HOH HOH . G 6 HOH A 97 597 73 HOH HOH . G 6 HOH A 98 598 131 HOH HOH . G 6 HOH A 99 599 198 HOH HOH . G 6 HOH A 100 600 164 HOH HOH . G 6 HOH A 101 601 57 HOH HOH . G 6 HOH A 102 602 70 HOH HOH . G 6 HOH A 103 603 143 HOH HOH . G 6 HOH A 104 604 139 HOH HOH . G 6 HOH A 105 605 75 HOH HOH . G 6 HOH A 106 606 7 HOH HOH . G 6 HOH A 107 607 85 HOH HOH . G 6 HOH A 108 608 183 HOH HOH . G 6 HOH A 109 609 171 HOH HOH . G 6 HOH A 110 610 138 HOH HOH . G 6 HOH A 111 611 111 HOH HOH . G 6 HOH A 112 612 84 HOH HOH . G 6 HOH A 113 613 124 HOH HOH . G 6 HOH A 114 614 31 HOH HOH . G 6 HOH A 115 615 56 HOH HOH . G 6 HOH A 116 616 16 HOH HOH . G 6 HOH A 117 617 142 HOH HOH . G 6 HOH A 118 618 14 HOH HOH . G 6 HOH A 119 619 54 HOH HOH . G 6 HOH A 120 620 202 HOH HOH . G 6 HOH A 121 621 200 HOH HOH . G 6 HOH A 122 622 212 HOH HOH . G 6 HOH A 123 623 173 HOH HOH . G 6 HOH A 124 624 215 HOH HOH . G 6 HOH A 125 625 140 HOH HOH . G 6 HOH A 126 626 2 HOH HOH . G 6 HOH A 127 627 184 HOH HOH . G 6 HOH A 128 628 151 HOH HOH . G 6 HOH A 129 629 172 HOH HOH . G 6 HOH A 130 630 224 HOH HOH . G 6 HOH A 131 631 113 HOH HOH . G 6 HOH A 132 632 18 HOH HOH . G 6 HOH A 133 633 44 HOH HOH . G 6 HOH A 134 634 63 HOH HOH . G 6 HOH A 135 635 114 HOH HOH . G 6 HOH A 136 636 28 HOH HOH . G 6 HOH A 137 637 149 HOH HOH . G 6 HOH A 138 638 62 HOH HOH . G 6 HOH A 139 639 190 HOH HOH . G 6 HOH A 140 640 168 HOH HOH . G 6 HOH A 141 641 163 HOH HOH . G 6 HOH A 142 642 68 HOH HOH . G 6 HOH A 143 643 40 HOH HOH . G 6 HOH A 144 644 119 HOH HOH . G 6 HOH A 145 645 102 HOH HOH . G 6 HOH A 146 646 207 HOH HOH . G 6 HOH A 147 647 118 HOH HOH . G 6 HOH A 148 648 208 HOH HOH . G 6 HOH A 149 649 175 HOH HOH . G 6 HOH A 150 650 169 HOH HOH . G 6 HOH A 151 651 25 HOH HOH . G 6 HOH A 152 652 181 HOH HOH . G 6 HOH A 153 653 144 HOH HOH . G 6 HOH A 154 654 51 HOH HOH . G 6 HOH A 155 655 9 HOH HOH . G 6 HOH A 156 656 192 HOH HOH . G 6 HOH A 157 657 214 HOH HOH . G 6 HOH A 158 658 150 HOH HOH . G 6 HOH A 159 659 159 HOH HOH . G 6 HOH A 160 660 11 HOH HOH . G 6 HOH A 161 661 15 HOH HOH . G 6 HOH A 162 662 166 HOH HOH . G 6 HOH A 163 663 91 HOH HOH . G 6 HOH A 164 664 80 HOH HOH . G 6 HOH A 165 665 93 HOH HOH . G 6 HOH A 166 666 161 HOH HOH . G 6 HOH A 167 667 100 HOH HOH . G 6 HOH A 168 668 89 HOH HOH . G 6 HOH A 169 669 154 HOH HOH . G 6 HOH A 170 670 36 HOH HOH . G 6 HOH A 171 671 117 HOH HOH . G 6 HOH A 172 672 64 HOH HOH . G 6 HOH A 173 673 107 HOH HOH . G 6 HOH A 174 674 74 HOH HOH . G 6 HOH A 175 675 82 HOH HOH . G 6 HOH A 176 676 103 HOH HOH . G 6 HOH A 177 677 46 HOH HOH . G 6 HOH A 178 678 126 HOH HOH . G 6 HOH A 179 679 83 HOH HOH . G 6 HOH A 180 680 61 HOH HOH . G 6 HOH A 181 681 108 HOH HOH . G 6 HOH A 182 682 115 HOH HOH . G 6 HOH A 183 683 17 HOH HOH . G 6 HOH A 184 684 3 HOH HOH . G 6 HOH A 185 685 187 HOH HOH . G 6 HOH A 186 686 216 HOH HOH . G 6 HOH A 187 687 179 HOH HOH . G 6 HOH A 188 688 189 HOH HOH . G 6 HOH A 189 689 116 HOH HOH . G 6 HOH A 190 690 185 HOH HOH . G 6 HOH A 191 691 133 HOH HOH . G 6 HOH A 192 692 162 HOH HOH . G 6 HOH A 193 693 86 HOH HOH . G 6 HOH A 194 694 120 HOH HOH . G 6 HOH A 195 695 211 HOH HOH . G 6 HOH A 196 696 174 HOH HOH . G 6 HOH A 197 697 156 HOH HOH . G 6 HOH A 198 698 165 HOH HOH . G 6 HOH A 199 699 160 HOH HOH . G 6 HOH A 200 700 209 HOH HOH . G 6 HOH A 201 701 194 HOH HOH . G 6 HOH A 202 702 146 HOH HOH . G 6 HOH A 203 703 109 HOH HOH . G 6 HOH A 204 704 206 HOH HOH . G 6 HOH A 205 705 219 HOH HOH . G 6 HOH A 206 706 180 HOH HOH . G 6 HOH A 207 707 213 HOH HOH . G 6 HOH A 208 708 199 HOH HOH . G 6 HOH A 209 709 205 HOH HOH . G 6 HOH A 210 710 177 HOH HOH . G 6 HOH A 211 711 147 HOH HOH . G 6 HOH A 212 712 188 HOH HOH . G 6 HOH A 213 713 218 HOH HOH . G 6 HOH A 214 714 221 HOH HOH . G 6 HOH A 215 715 196 HOH HOH . G 6 HOH A 216 716 127 HOH HOH . G 6 HOH A 217 717 26 HOH HOH . G 6 HOH A 218 718 193 HOH HOH . G 6 HOH A 219 719 167 HOH HOH . G 6 HOH A 220 720 158 HOH HOH . G 6 HOH A 221 721 210 HOH HOH . G 6 HOH A 222 722 186 HOH HOH . G 6 HOH A 223 723 110 HOH HOH . G 6 HOH A 224 724 204 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O TBU . . . D 4 -23.946 -24.627 30.735 1 28.96 ? O TBU 403 A 1 HETATM 2 C C TBU . . . D 4 -24.845 -24.575 31.851 1 30.14 ? C TBU 403 A 1 HETATM 3 C C1 TBU . . . D 4 -24.479 -23.385 32.741 1 30.64 ? C1 TBU 403 A 1 HETATM 4 C C2 TBU . . . D 4 -26.233 -24.393 31.281 1 29.43 ? C2 TBU 403 A 1 HETATM 5 C C3 TBU . . . D 4 -24.808 -25.892 32.652 1 28.93 ? C3 TBU 403 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #