data_5X1Q
#
_model_server_result.job_id            ZUQLiZU1Jxd9AnQtEHpjtQ 
_model_server_result.datetime_utc      '2024-11-05 00:29:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5x1q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5X1Q 
#
_exptl.entry_id    5X1Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5X1Q 
_cell.length_a            65.898 
_cell.length_b            78.315 
_cell.length_c            59.188 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5X1Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O3G ATP . A ATP 401 1_555 C MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc2 B O2B ATP . A ATP 401 1_555 C MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc3 C MN MN . A MN 402 1_555 E O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
metalc ? metalc4 C MN MN . A MN 402 1_555 E O HOH . A HOH 734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5X1Q 
_atom_sites.fract_transf_matrix[1][1]    0.015175 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012769 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016895 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 401 1 ATP ATP . 
C 3 MN A 1 402 1 MN MN . 
D 4 GOL A 1 403 1 GOL GOL . 
E 5 HOH A 1 501 215 HOH HOH . 
E 5 HOH A 2 502 294 HOH HOH . 
E 5 HOH A 3 503 300 HOH HOH . 
E 5 HOH A 4 504 220 HOH HOH . 
E 5 HOH A 5 505 246 HOH HOH . 
E 5 HOH A 6 506 121 HOH HOH . 
E 5 HOH A 7 507 96 HOH HOH . 
E 5 HOH A 8 508 97 HOH HOH . 
E 5 HOH A 9 509 258 HOH HOH . 
E 5 HOH A 10 510 209 HOH HOH . 
E 5 HOH A 11 511 137 HOH HOH . 
E 5 HOH A 12 512 44 HOH HOH . 
E 5 HOH A 13 513 117 HOH HOH . 
E 5 HOH A 14 514 214 HOH HOH . 
E 5 HOH A 15 515 226 HOH HOH . 
E 5 HOH A 16 516 236 HOH HOH . 
E 5 HOH A 17 517 125 HOH HOH . 
E 5 HOH A 18 518 284 HOH HOH . 
E 5 HOH A 19 519 210 HOH HOH . 
E 5 HOH A 20 520 217 HOH HOH . 
E 5 HOH A 21 521 13 HOH HOH . 
E 5 HOH A 22 522 3 HOH HOH . 
E 5 HOH A 23 523 105 HOH HOH . 
E 5 HOH A 24 524 232 HOH HOH . 
E 5 HOH A 25 525 237 HOH HOH . 
E 5 HOH A 26 526 30 HOH HOH . 
E 5 HOH A 27 527 70 HOH HOH . 
E 5 HOH A 28 528 75 HOH HOH . 
E 5 HOH A 29 529 25 HOH HOH . 
E 5 HOH A 30 530 26 HOH HOH . 
E 5 HOH A 31 531 42 HOH HOH . 
E 5 HOH A 32 532 161 HOH HOH . 
E 5 HOH A 33 533 211 HOH HOH . 
E 5 HOH A 34 534 83 HOH HOH . 
E 5 HOH A 35 535 40 HOH HOH . 
E 5 HOH A 36 536 268 HOH HOH . 
E 5 HOH A 37 537 22 HOH HOH . 
E 5 HOH A 38 538 244 HOH HOH . 
E 5 HOH A 39 539 36 HOH HOH . 
E 5 HOH A 40 540 278 HOH HOH . 
E 5 HOH A 41 541 93 HOH HOH . 
E 5 HOH A 42 542 298 HOH HOH . 
E 5 HOH A 43 543 43 HOH HOH . 
E 5 HOH A 44 544 21 HOH HOH . 
E 5 HOH A 45 545 39 HOH HOH . 
E 5 HOH A 46 546 200 HOH HOH . 
E 5 HOH A 47 547 99 HOH HOH . 
E 5 HOH A 48 548 79 HOH HOH . 
E 5 HOH A 49 549 16 HOH HOH . 
E 5 HOH A 50 550 38 HOH HOH . 
E 5 HOH A 51 551 270 HOH HOH . 
E 5 HOH A 52 552 301 HOH HOH . 
E 5 HOH A 53 553 48 HOH HOH . 
E 5 HOH A 54 554 119 HOH HOH . 
E 5 HOH A 55 555 245 HOH HOH . 
E 5 HOH A 56 556 29 HOH HOH . 
E 5 HOH A 57 557 86 HOH HOH . 
E 5 HOH A 58 558 272 HOH HOH . 
E 5 HOH A 59 559 71 HOH HOH . 
E 5 HOH A 60 560 76 HOH HOH . 
E 5 HOH A 61 561 32 HOH HOH . 
E 5 HOH A 62 562 225 HOH HOH . 
E 5 HOH A 63 563 241 HOH HOH . 
E 5 HOH A 64 564 208 HOH HOH . 
E 5 HOH A 65 565 286 HOH HOH . 
E 5 HOH A 66 566 283 HOH HOH . 
E 5 HOH A 67 567 47 HOH HOH . 
E 5 HOH A 68 568 205 HOH HOH . 
E 5 HOH A 69 569 34 HOH HOH . 
E 5 HOH A 70 570 271 HOH HOH . 
E 5 HOH A 71 571 59 HOH HOH . 
E 5 HOH A 72 572 207 HOH HOH . 
E 5 HOH A 73 573 66 HOH HOH . 
E 5 HOH A 74 574 56 HOH HOH . 
E 5 HOH A 75 575 160 HOH HOH . 
E 5 HOH A 76 576 291 HOH HOH . 
E 5 HOH A 77 577 64 HOH HOH . 
E 5 HOH A 78 578 206 HOH HOH . 
E 5 HOH A 79 579 51 HOH HOH . 
E 5 HOH A 80 580 277 HOH HOH . 
E 5 HOH A 81 581 6 HOH HOH . 
E 5 HOH A 82 582 295 HOH HOH . 
E 5 HOH A 83 583 52 HOH HOH . 
E 5 HOH A 84 584 276 HOH HOH . 
E 5 HOH A 85 585 156 HOH HOH . 
E 5 HOH A 86 586 85 HOH HOH . 
E 5 HOH A 87 587 45 HOH HOH . 
E 5 HOH A 88 588 116 HOH HOH . 
E 5 HOH A 89 589 212 HOH HOH . 
E 5 HOH A 90 590 27 HOH HOH . 
E 5 HOH A 91 591 23 HOH HOH . 
E 5 HOH A 92 592 10 HOH HOH . 
E 5 HOH A 93 593 54 HOH HOH . 
E 5 HOH A 94 594 247 HOH HOH . 
E 5 HOH A 95 595 167 HOH HOH . 
E 5 HOH A 96 596 219 HOH HOH . 
E 5 HOH A 97 597 285 HOH HOH . 
E 5 HOH A 98 598 50 HOH HOH . 
E 5 HOH A 99 599 14 HOH HOH . 
E 5 HOH A 100 600 28 HOH HOH . 
E 5 HOH A 101 601 31 HOH HOH . 
E 5 HOH A 102 602 78 HOH HOH . 
E 5 HOH A 103 603 92 HOH HOH . 
E 5 HOH A 104 604 89 HOH HOH . 
E 5 HOH A 105 605 290 HOH HOH . 
E 5 HOH A 106 606 144 HOH HOH . 
E 5 HOH A 107 607 135 HOH HOH . 
E 5 HOH A 108 608 24 HOH HOH . 
E 5 HOH A 109 609 141 HOH HOH . 
E 5 HOH A 110 610 132 HOH HOH . 
E 5 HOH A 111 611 104 HOH HOH . 
E 5 HOH A 112 612 175 HOH HOH . 
E 5 HOH A 113 613 111 HOH HOH . 
E 5 HOH A 114 614 149 HOH HOH . 
E 5 HOH A 115 615 140 HOH HOH . 
E 5 HOH A 116 616 134 HOH HOH . 
E 5 HOH A 117 617 213 HOH HOH . 
E 5 HOH A 118 618 102 HOH HOH . 
E 5 HOH A 119 619 279 HOH HOH . 
E 5 HOH A 120 620 62 HOH HOH . 
E 5 HOH A 121 621 162 HOH HOH . 
E 5 HOH A 122 622 94 HOH HOH . 
E 5 HOH A 123 623 282 HOH HOH . 
E 5 HOH A 124 624 80 HOH HOH . 
E 5 HOH A 125 625 12 HOH HOH . 
E 5 HOH A 126 626 118 HOH HOH . 
E 5 HOH A 127 627 19 HOH HOH . 
E 5 HOH A 128 628 1 HOH HOH . 
E 5 HOH A 129 629 202 HOH HOH . 
E 5 HOH A 130 630 46 HOH HOH . 
E 5 HOH A 131 631 41 HOH HOH . 
E 5 HOH A 132 632 131 HOH HOH . 
E 5 HOH A 133 633 95 HOH HOH . 
E 5 HOH A 134 634 143 HOH HOH . 
E 5 HOH A 135 635 60 HOH HOH . 
E 5 HOH A 136 636 87 HOH HOH . 
E 5 HOH A 137 637 120 HOH HOH . 
E 5 HOH A 138 638 287 HOH HOH . 
E 5 HOH A 139 639 15 HOH HOH . 
E 5 HOH A 140 640 242 HOH HOH . 
E 5 HOH A 141 641 68 HOH HOH . 
E 5 HOH A 142 642 158 HOH HOH . 
E 5 HOH A 143 643 274 HOH HOH . 
E 5 HOH A 144 644 2 HOH HOH . 
E 5 HOH A 145 645 164 HOH HOH . 
E 5 HOH A 146 646 150 HOH HOH . 
E 5 HOH A 147 647 223 HOH HOH . 
E 5 HOH A 148 648 100 HOH HOH . 
E 5 HOH A 149 649 33 HOH HOH . 
E 5 HOH A 150 650 129 HOH HOH . 
E 5 HOH A 151 651 229 HOH HOH . 
E 5 HOH A 152 652 174 HOH HOH . 
E 5 HOH A 153 653 35 HOH HOH . 
E 5 HOH A 154 654 20 HOH HOH . 
E 5 HOH A 155 655 239 HOH HOH . 
E 5 HOH A 156 656 296 HOH HOH . 
E 5 HOH A 157 657 250 HOH HOH . 
E 5 HOH A 158 658 115 HOH HOH . 
E 5 HOH A 159 659 90 HOH HOH . 
E 5 HOH A 160 660 18 HOH HOH . 
E 5 HOH A 161 661 37 HOH HOH . 
E 5 HOH A 162 662 275 HOH HOH . 
E 5 HOH A 163 663 57 HOH HOH . 
E 5 HOH A 164 664 65 HOH HOH . 
E 5 HOH A 165 665 108 HOH HOH . 
E 5 HOH A 166 666 55 HOH HOH . 
E 5 HOH A 167 667 273 HOH HOH . 
E 5 HOH A 168 668 152 HOH HOH . 
E 5 HOH A 169 669 251 HOH HOH . 
E 5 HOH A 170 670 91 HOH HOH . 
E 5 HOH A 171 671 88 HOH HOH . 
E 5 HOH A 172 672 201 HOH HOH . 
E 5 HOH A 173 673 240 HOH HOH . 
E 5 HOH A 174 674 63 HOH HOH . 
E 5 HOH A 175 675 98 HOH HOH . 
E 5 HOH A 176 676 122 HOH HOH . 
E 5 HOH A 177 677 8 HOH HOH . 
E 5 HOH A 178 678 203 HOH HOH . 
E 5 HOH A 179 679 281 HOH HOH . 
E 5 HOH A 180 680 72 HOH HOH . 
E 5 HOH A 181 681 224 HOH HOH . 
E 5 HOH A 182 682 49 HOH HOH . 
E 5 HOH A 183 683 130 HOH HOH . 
E 5 HOH A 184 684 17 HOH HOH . 
E 5 HOH A 185 685 106 HOH HOH . 
E 5 HOH A 186 686 9 HOH HOH . 
E 5 HOH A 187 687 126 HOH HOH . 
E 5 HOH A 188 688 53 HOH HOH . 
E 5 HOH A 189 689 199 HOH HOH . 
E 5 HOH A 190 690 257 HOH HOH . 
E 5 HOH A 191 691 7 HOH HOH . 
E 5 HOH A 192 692 280 HOH HOH . 
E 5 HOH A 193 693 5 HOH HOH . 
E 5 HOH A 194 694 299 HOH HOH . 
E 5 HOH A 195 695 204 HOH HOH . 
E 5 HOH A 196 696 155 HOH HOH . 
E 5 HOH A 197 697 114 HOH HOH . 
E 5 HOH A 198 698 231 HOH HOH . 
E 5 HOH A 199 699 77 HOH HOH . 
E 5 HOH A 200 700 157 HOH HOH . 
E 5 HOH A 201 701 61 HOH HOH . 
E 5 HOH A 202 702 255 HOH HOH . 
E 5 HOH A 203 703 124 HOH HOH . 
E 5 HOH A 204 704 73 HOH HOH . 
E 5 HOH A 205 705 139 HOH HOH . 
E 5 HOH A 206 706 197 HOH HOH . 
E 5 HOH A 207 707 266 HOH HOH . 
E 5 HOH A 208 708 147 HOH HOH . 
E 5 HOH A 209 709 123 HOH HOH . 
E 5 HOH A 210 710 153 HOH HOH . 
E 5 HOH A 211 711 227 HOH HOH . 
E 5 HOH A 212 712 256 HOH HOH . 
E 5 HOH A 213 713 252 HOH HOH . 
E 5 HOH A 214 714 133 HOH HOH . 
E 5 HOH A 215 715 222 HOH HOH . 
E 5 HOH A 216 716 146 HOH HOH . 
E 5 HOH A 217 717 169 HOH HOH . 
E 5 HOH A 218 718 289 HOH HOH . 
E 5 HOH A 219 719 172 HOH HOH . 
E 5 HOH A 220 720 263 HOH HOH . 
E 5 HOH A 221 721 113 HOH HOH . 
E 5 HOH A 222 722 138 HOH HOH . 
E 5 HOH A 223 723 260 HOH HOH . 
E 5 HOH A 224 724 269 HOH HOH . 
E 5 HOH A 225 725 69 HOH HOH . 
E 5 HOH A 226 726 170 HOH HOH . 
E 5 HOH A 227 727 233 HOH HOH . 
E 5 HOH A 228 728 218 HOH HOH . 
E 5 HOH A 229 729 103 HOH HOH . 
E 5 HOH A 230 730 154 HOH HOH . 
E 5 HOH A 231 731 267 HOH HOH . 
E 5 HOH A 232 732 288 HOH HOH . 
E 5 HOH A 233 733 159 HOH HOH . 
E 5 HOH A 234 734 216 HOH HOH . 
E 5 HOH A 235 735 198 HOH HOH . 
E 5 HOH A 236 736 235 HOH HOH . 
E 5 HOH A 237 737 74 HOH HOH . 
E 5 HOH A 238 738 127 HOH HOH . 
E 5 HOH A 239 739 142 HOH HOH . 
E 5 HOH A 240 740 293 HOH HOH . 
E 5 HOH A 241 741 292 HOH HOH . 
E 5 HOH A 242 742 262 HOH HOH . 
E 5 HOH A 243 743 81 HOH HOH . 
E 5 HOH A 244 744 171 HOH HOH . 
E 5 HOH A 245 745 136 HOH HOH . 
E 5 HOH A 246 746 109 HOH HOH . 
E 5 HOH A 247 747 264 HOH HOH . 
E 5 HOH A 248 748 168 HOH HOH . 
E 5 HOH A 249 749 82 HOH HOH . 
E 5 HOH A 250 750 234 HOH HOH . 
E 5 HOH A 251 751 101 HOH HOH . 
E 5 HOH A 252 752 238 HOH HOH . 
E 5 HOH A 253 753 58 HOH HOH . 
E 5 HOH A 254 754 163 HOH HOH . 
E 5 HOH A 255 755 128 HOH HOH . 
E 5 HOH A 256 756 182 HOH HOH . 
E 5 HOH A 257 757 112 HOH HOH . 
E 5 HOH A 258 758 176 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               23.415 
_atom_site.Cartn_y               104.073 
_atom_site.Cartn_z               64.15 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        66.36 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#