data_5X1W
#
_model_server_result.job_id            exKWSiJ5muDsHmUDovY-Hw 
_model_server_result.datetime_utc      '2024-10-18 16:22:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5x1w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":601}' 
#
_entry.id    5X1W 
#
_exptl.entry_id    5X1W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              340.116 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            1,6-di-O-phosphono-beta-D-fructofuranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.52 
_cell.angle_gamma         90 
_cell.entry_id            5X1W 
_cell.length_a            80.823 
_cell.length_b            153.486 
_cell.length_c            94.207 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5X1W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 J N N 
#
_chem_comp.formula           'C6 H14 O12 P2' 
_chem_comp.formula_weight    340.116 
_chem_comp.id                FBP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,6-di-O-phosphono-beta-D-fructofuranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     BETA-FRUCTOSE-1,6-DIPHOSPHATE;FRUCTOSE-1,6-BISPHOSPHATE;1,6-di-O-phosphono-beta-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1P FBP doub 148 n n 
P1 O2P FBP sing 149 n n 
P1 O3P FBP sing 150 n n 
P1 O1 FBP sing 151 n n 
O2P HOP2 FBP sing 152 n n 
O3P HOP3 FBP sing 153 n n 
O1 C1 FBP sing 154 n n 
C1 C2 FBP sing 155 n n 
C1 H11 FBP sing 156 n n 
C1 H12 FBP sing 157 n n 
C2 O2 FBP sing 158 n n 
C2 C3 FBP sing 159 n n 
C2 O5 FBP sing 160 n n 
O2 HO2 FBP sing 161 n n 
C3 O3 FBP sing 162 n n 
C3 C4 FBP sing 163 n n 
C3 H3 FBP sing 164 n n 
O3 HO3 FBP sing 165 n n 
C4 O4 FBP sing 166 n n 
C4 C5 FBP sing 167 n n 
C4 H4 FBP sing 168 n n 
O4 HO4 FBP sing 169 n n 
C5 O5 FBP sing 170 n n 
C5 C6 FBP sing 171 n n 
C5 H5 FBP sing 172 n n 
C6 O6 FBP sing 173 n n 
C6 H61 FBP sing 174 n n 
C6 H62 FBP sing 175 n n 
O6 P2 FBP sing 176 n n 
P2 O4P FBP doub 177 n n 
P2 O5P FBP sing 178 n n 
P2 O6P FBP sing 179 n n 
O5P HOP5 FBP sing 180 n n 
O6P HOP6 FBP sing 181 n n 
#
_pdbx_chem_comp_identifier.comp_id            FBP 
_pdbx_chem_comp_identifier.identifier         b-D-Fruf1PO36PO3 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     5X1W 
_atom_sites.fract_transf_matrix[1][1]    0.012373 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002975 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006515 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010918 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FBP A 1 601 601 FBP FBP . 
F 3 7Y0 B 1 601 601 7Y0 7Y0 . 
G 2 FBP B 1 602 602 FBP FBP . 
H 3 7Y0 C 1 601 601 7Y0 7Y0 . 
I 2 FBP C 1 602 602 FBP FBP . 
J 2 FBP D 1 601 601 FBP FBP . 
K 4 HOH A 1 701 39 HOH HOH . 
K 4 HOH A 2 702 215 HOH HOH . 
K 4 HOH A 3 703 213 HOH HOH . 
K 4 HOH A 4 704 166 HOH HOH . 
K 4 HOH A 5 705 187 HOH HOH . 
K 4 HOH A 6 706 67 HOH HOH . 
K 4 HOH A 7 707 17 HOH HOH . 
K 4 HOH A 8 708 83 HOH HOH . 
K 4 HOH A 9 709 52 HOH HOH . 
K 4 HOH A 10 710 163 HOH HOH . 
K 4 HOH A 11 711 49 HOH HOH . 
K 4 HOH A 12 712 22 HOH HOH . 
K 4 HOH A 13 713 60 HOH HOH . 
K 4 HOH A 14 714 21 HOH HOH . 
K 4 HOH A 15 715 25 HOH HOH . 
K 4 HOH A 16 716 23 HOH HOH . 
L 4 HOH B 1 701 70 HOH HOH . 
L 4 HOH B 2 702 234 HOH HOH . 
L 4 HOH B 3 703 96 HOH HOH . 
L 4 HOH B 4 704 78 HOH HOH . 
L 4 HOH B 5 705 55 HOH HOH . 
L 4 HOH B 6 706 43 HOH HOH . 
L 4 HOH B 7 707 57 HOH HOH . 
L 4 HOH B 8 708 42 HOH HOH . 
L 4 HOH B 9 709 30 HOH HOH . 
L 4 HOH B 10 710 87 HOH HOH . 
L 4 HOH B 11 711 119 HOH HOH . 
L 4 HOH B 12 712 41 HOH HOH . 
L 4 HOH B 13 713 235 HOH HOH . 
L 4 HOH B 14 714 131 HOH HOH . 
L 4 HOH B 15 715 199 HOH HOH . 
L 4 HOH B 16 716 233 HOH HOH . 
L 4 HOH B 17 717 182 HOH HOH . 
L 4 HOH B 18 718 50 HOH HOH . 
M 4 HOH C 1 701 169 HOH HOH . 
M 4 HOH C 2 702 125 HOH HOH . 
M 4 HOH C 3 703 86 HOH HOH . 
M 4 HOH C 4 704 230 HOH HOH . 
M 4 HOH C 5 705 232 HOH HOH . 
M 4 HOH C 6 706 45 HOH HOH . 
M 4 HOH C 7 707 82 HOH HOH . 
M 4 HOH C 8 708 126 HOH HOH . 
M 4 HOH C 9 709 172 HOH HOH . 
M 4 HOH C 10 710 121 HOH HOH . 
M 4 HOH C 11 711 54 HOH HOH . 
M 4 HOH C 12 712 62 HOH HOH . 
N 4 HOH D 1 701 92 HOH HOH . 
N 4 HOH D 2 702 231 HOH HOH . 
N 4 HOH D 3 703 98 HOH HOH . 
N 4 HOH D 4 704 208 HOH HOH . 
N 4 HOH D 5 705 3 HOH HOH . 
N 4 HOH D 6 706 37 HOH HOH . 
N 4 HOH D 7 707 2 HOH HOH . 
N 4 HOH D 8 708 47 HOH HOH . 
N 4 HOH D 9 709 44 HOH HOH . 
N 4 HOH D 10 710 196 HOH HOH . 
N 4 HOH D 11 711 220 HOH HOH . 
N 4 HOH D 12 712 167 HOH HOH . 
N 4 HOH D 13 713 204 HOH HOH . 
N 4 HOH D 14 714 100 HOH HOH . 
N 4 HOH D 15 715 15 HOH HOH . 
N 4 HOH D 16 716 89 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 FBP . . . E 2 -24.035 -18.643 12.546 1 38.89 ? P1 FBP 601 A 1 
HETATM 2 O O1P FBP . . . E 2 -24.051 -17.687 11.373 1 37.25 ? O1P FBP 601 A 1 
HETATM 3 O O2P FBP . . . E 2 -23.958 -20.101 12.16 1 38.69 ? O2P FBP 601 A 1 
HETATM 4 O O3P FBP . . . E 2 -25.027 -18.315 13.638 1 38.25 ? O3P FBP 601 A 1 
HETATM 5 O O1 FBP . . . E 2 -22.632 -18.34 13.261 1 38.17 ? O1 FBP 601 A 1 
HETATM 6 C C1 FBP . . . E 2 -21.396 -18.886 12.813 1 35.57 ? C1 FBP 601 A 1 
HETATM 7 C C2 FBP . . . E 2 -20.307 -18.282 13.682 1 34.98 ? C2 FBP 601 A 1 
HETATM 8 O O2 FBP . . . E 2 -19.025 -18.739 13.23 1 34.23 ? O2 FBP 601 A 1 
HETATM 9 C C3 FBP . . . E 2 -20.504 -18.679 15.136 1 35.21 ? C3 FBP 601 A 1 
HETATM 10 O O3 FBP . . . E 2 -19.883 -19.944 15.348 1 36.98 ? O3 FBP 601 A 1 
HETATM 11 C C4 FBP . . . E 2 -19.896 -17.51 15.887 1 33.9 ? C4 FBP 601 A 1 
HETATM 12 O O4 FBP . . . E 2 -20.412 -17.4 17.215 1 31.59 ? O4 FBP 601 A 1 
HETATM 13 C C5 FBP . . . E 2 -20.339 -16.341 15.013 1 34.06 ? C5 FBP 601 A 1 
HETATM 14 O O5 FBP . . . E 2 -20.349 -16.845 13.665 1 34.39 ? O5 FBP 601 A 1 
HETATM 15 C C6 FBP . . . E 2 -19.463 -15.098 15.146 1 34.27 ? C6 FBP 601 A 1 
HETATM 16 O O6 FBP . . . E 2 -20.256 -13.933 14.935 1 35.55 ? O6 FBP 601 A 1 
HETATM 17 P P2 FBP . . . E 2 -19.865 -12.478 15.504 1 35.96 ? P2 FBP 601 A 1 
HETATM 18 O O4P FBP . . . E 2 -18.558 -12.155 14.855 1 34.85 ? O4P FBP 601 A 1 
HETATM 19 O O5P FBP . . . E 2 -19.764 -12.633 17.004 1 36.11 ? O5P FBP 601 A 1 
HETATM 20 O O6P FBP . . . E 2 -21.002 -11.61 15.028 1 35.06 ? O6P FBP 601 A 1 
#
_model_server_stats.io_time_ms              138 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           239 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           20 
#