data_5X1W # _model_server_result.job_id CZHpDxwjKpI_fQGGOlHPVw _model_server_result.datetime_utc '2024-10-18 16:23:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x1w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5X1W # _exptl.entry_id 5X1W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 620.311 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[2,3-bis(chloranyl)phenyl]carbonyl-N-[2-[[4-[2,3-bis(chloranyl)phenyl]carbonyl-1-methyl-pyrrol-2-yl]carbonylamino]ethyl]-1-methyl-pyrrole-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.52 _cell.angle_gamma 90 _cell.entry_id 5X1W _cell.length_a 80.823 _cell.length_b 153.486 _cell.length_c 94.207 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X1W _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N # _chem_comp.formula 'C28 H22 Cl4 N4 O4' _chem_comp.formula_weight 620.311 _chem_comp.id 7Y0 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[2,3-bis(chloranyl)phenyl]carbonyl-N-[2-[[4-[2,3-bis(chloranyl)phenyl]carbonyl-1-methyl-pyrrol-2-yl]carbonylamino]ethyl]-1-methyl-pyrrole-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O36 C24 7Y0 doub 1 n n C26 N30 7Y0 sing 2 n n C24 C20 7Y0 sing 3 n n C24 N32 7Y0 sing 4 n n N30 C20 7Y0 sing 5 n y N30 C10 7Y0 sing 6 n y C28 C27 7Y0 sing 7 n n C28 N32 7Y0 sing 8 n n C27 N31 7Y0 sing 9 n n C20 C8 7Y0 doub 10 n y C10 C14 7Y0 doub 11 n y C8 C14 7Y0 sing 12 n y C14 C22 7Y0 sing 13 n n N31 C23 7Y0 sing 14 n n O34 C22 7Y0 doub 15 n n C22 C12 7Y0 sing 16 n n O35 C23 7Y0 doub 17 n n C23 C19 7Y0 sing 18 n n C1 C5 7Y0 doub 19 n y C1 C3 7Y0 sing 20 n y C4 C12 7Y0 doub 21 n y C4 C2 7Y0 sing 22 n y C5 C15 7Y0 sing 23 n y C12 C18 7Y0 sing 24 n y C3 C11 7Y0 doub 25 n y C7 C19 7Y0 doub 26 n y C7 C13 7Y0 sing 27 n y C19 N29 7Y0 sing 28 n y C2 C6 7Y0 doub 29 n y C15 CL1 7Y0 sing 30 n n C15 C17 7Y0 doub 31 n y C18 CL4 7Y0 sing 32 n n C18 C16 7Y0 doub 33 n y C11 C17 7Y0 sing 34 n y C11 C21 7Y0 sing 35 n n C13 C21 7Y0 sing 36 n n C13 C9 7Y0 doub 37 n y N29 C25 7Y0 sing 38 n n N29 C9 7Y0 sing 39 n y C17 CL3 7Y0 sing 40 n n C6 C16 7Y0 sing 41 n y C21 O33 7Y0 doub 42 n n C16 CL2 7Y0 sing 43 n n C1 H1 7Y0 sing 44 n n C2 H2 7Y0 sing 45 n n C3 H3 7Y0 sing 46 n n C4 H4 7Y0 sing 47 n n C5 H5 7Y0 sing 48 n n C6 H6 7Y0 sing 49 n n C7 H7 7Y0 sing 50 n n C8 H8 7Y0 sing 51 n n C9 H9 7Y0 sing 52 n n C10 H10 7Y0 sing 53 n n C25 H11 7Y0 sing 54 n n C25 H12 7Y0 sing 55 n n C25 H13 7Y0 sing 56 n n C26 H14 7Y0 sing 57 n n C26 H15 7Y0 sing 58 n n C26 H16 7Y0 sing 59 n n C27 H17 7Y0 sing 60 n n C27 H18 7Y0 sing 61 n n C28 H19 7Y0 sing 62 n n C28 H20 7Y0 sing 63 n n N31 H21 7Y0 sing 64 n n N32 H22 7Y0 sing 65 n n # _atom_sites.entry_id 5X1W _atom_sites.fract_transf_matrix[1][1] 0.012373 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002975 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006515 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FBP A 1 601 601 FBP FBP . F 3 7Y0 B 1 601 601 7Y0 7Y0 . G 2 FBP B 1 602 602 FBP FBP . H 3 7Y0 C 1 601 601 7Y0 7Y0 . I 2 FBP C 1 602 602 FBP FBP . J 2 FBP D 1 601 601 FBP FBP . K 4 HOH A 1 701 39 HOH HOH . K 4 HOH A 2 702 215 HOH HOH . K 4 HOH A 3 703 213 HOH HOH . K 4 HOH A 4 704 166 HOH HOH . K 4 HOH A 5 705 187 HOH HOH . K 4 HOH A 6 706 67 HOH HOH . K 4 HOH A 7 707 17 HOH HOH . K 4 HOH A 8 708 83 HOH HOH . K 4 HOH A 9 709 52 HOH HOH . K 4 HOH A 10 710 163 HOH HOH . K 4 HOH A 11 711 49 HOH HOH . K 4 HOH A 12 712 22 HOH HOH . K 4 HOH A 13 713 60 HOH HOH . K 4 HOH A 14 714 21 HOH HOH . K 4 HOH A 15 715 25 HOH HOH . K 4 HOH A 16 716 23 HOH HOH . L 4 HOH B 1 701 70 HOH HOH . L 4 HOH B 2 702 234 HOH HOH . L 4 HOH B 3 703 96 HOH HOH . L 4 HOH B 4 704 78 HOH HOH . L 4 HOH B 5 705 55 HOH HOH . L 4 HOH B 6 706 43 HOH HOH . L 4 HOH B 7 707 57 HOH HOH . L 4 HOH B 8 708 42 HOH HOH . L 4 HOH B 9 709 30 HOH HOH . L 4 HOH B 10 710 87 HOH HOH . L 4 HOH B 11 711 119 HOH HOH . L 4 HOH B 12 712 41 HOH HOH . L 4 HOH B 13 713 235 HOH HOH . L 4 HOH B 14 714 131 HOH HOH . L 4 HOH B 15 715 199 HOH HOH . L 4 HOH B 16 716 233 HOH HOH . L 4 HOH B 17 717 182 HOH HOH . L 4 HOH B 18 718 50 HOH HOH . M 4 HOH C 1 701 169 HOH HOH . M 4 HOH C 2 702 125 HOH HOH . M 4 HOH C 3 703 86 HOH HOH . M 4 HOH C 4 704 230 HOH HOH . M 4 HOH C 5 705 232 HOH HOH . M 4 HOH C 6 706 45 HOH HOH . M 4 HOH C 7 707 82 HOH HOH . M 4 HOH C 8 708 126 HOH HOH . M 4 HOH C 9 709 172 HOH HOH . M 4 HOH C 10 710 121 HOH HOH . M 4 HOH C 11 711 54 HOH HOH . M 4 HOH C 12 712 62 HOH HOH . N 4 HOH D 1 701 92 HOH HOH . N 4 HOH D 2 702 231 HOH HOH . N 4 HOH D 3 703 98 HOH HOH . N 4 HOH D 4 704 208 HOH HOH . N 4 HOH D 5 705 3 HOH HOH . N 4 HOH D 6 706 37 HOH HOH . N 4 HOH D 7 707 2 HOH HOH . N 4 HOH D 8 708 47 HOH HOH . N 4 HOH D 9 709 44 HOH HOH . N 4 HOH D 10 710 196 HOH HOH . N 4 HOH D 11 711 220 HOH HOH . N 4 HOH D 12 712 167 HOH HOH . N 4 HOH D 13 713 204 HOH HOH . N 4 HOH D 14 714 100 HOH HOH . N 4 HOH D 15 715 15 HOH HOH . N 4 HOH D 16 716 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 7Y0 . . . F 3 14.197 6.05 11.761 1 31.52 ? C1 7Y0 601 B 1 HETATM 2 C C2 7Y0 . . . F 3 2.96 1.78 13.215 1 34.2 ? C2 7Y0 601 B 1 HETATM 3 C C3 7Y0 . . . F 3 13.31 6.814 12.482 1 31.79 ? C3 7Y0 601 B 1 HETATM 4 C C4 7Y0 . . . F 3 3.725 1.29 12.183 1 34.34 ? C4 7Y0 601 B 1 HETATM 5 C C5 7Y0 . . . F 3 14.707 4.897 12.305 1 31.79 ? C5 7Y0 601 B 1 HETATM 6 C C6 7Y0 . . . F 3 3.247 1.422 14.507 1 35.28 ? C6 7Y0 601 B 1 HETATM 7 C C7 7Y0 . . . F 3 10.034 7.443 12.709 1 32.83 ? C7 7Y0 601 B 1 HETATM 8 C C8 7Y0 . . . F 3 6.183 2.258 10.183 1 31.89 ? C8 7Y0 601 B 1 HETATM 9 C C9 7Y0 . . . F 3 9.541 7.851 14.853 1 33.37 ? C9 7Y0 601 B 1 HETATM 10 C C10 7Y0 . . . F 3 7.326 0.439 9.555 1 32.14 ? C10 7Y0 601 B 1 HETATM 11 C C11 7Y0 . . . F 3 12.894 6.401 13.728 1 32.47 ? C11 7Y0 601 B 1 HETATM 12 C C12 7Y0 . . . F 3 4.808 0.483 12.443 1 34.49 ? C12 7Y0 601 B 1 HETATM 13 C C13 7Y0 . . . F 3 10.576 7.489 14.021 1 33.22 ? C13 7Y0 601 B 1 HETATM 14 C C14 7Y0 . . . F 3 6.335 0.862 10.405 1 33.03 ? C14 7Y0 601 B 1 HETATM 15 C C15 7Y0 . . . F 3 14.323 4.506 13.567 1 32.26 ? C15 7Y0 601 B 1 HETATM 16 C C16 7Y0 . . . F 3 4.304 0.58 14.765 1 35.79 ? C16 7Y0 601 B 1 HETATM 17 C C17 7Y0 . . . F 3 13.414 5.247 14.291 1 32.26 ? C17 7Y0 601 B 1 HETATM 18 C C18 7Y0 . . . F 3 5.096 0.102 13.739 1 35.43 ? C18 7Y0 601 B 1 HETATM 19 C C19 7Y0 . . . F 3 8.688 7.756 12.759 1 31.99 ? C19 7Y0 601 B 1 HETATM 20 C C20 7Y0 . . . F 3 7.081 2.667 9.216 1 31.86 ? C20 7Y0 601 B 1 HETATM 21 C C21 7Y0 . . . F 3 11.948 7.267 14.507 1 32.69 ? C21 7Y0 601 B 1 HETATM 22 C C22 7Y0 . . . F 3 5.611 -0.06 11.295 1 33.75 ? C22 7Y0 601 B 1 HETATM 23 C C23 7Y0 . . . F 3 7.764 7.819 11.632 1 32.1 ? C23 7Y0 601 B 1 HETATM 24 C C24 7Y0 . . . F 3 7.247 4.028 8.692 1 32.04 ? C24 7Y0 601 B 1 HETATM 25 C C25 7Y0 . . . F 3 7.126 8.363 14.682 1 31.69 ? C25 7Y0 601 B 1 HETATM 26 C C26 7Y0 . . . F 3 8.844 1.404 7.865 1 32.02 ? C26 7Y0 601 B 1 HETATM 27 C C27 7Y0 . . . F 3 7.643 7.198 9.287 1 32.23 ? C27 7Y0 601 B 1 HETATM 28 C C28 7Y0 . . . F 3 6.447 6.298 9.058 1 31.72 ? C28 7Y0 601 B 1 HETATM 29 N N29 7Y0 . . . F 3 8.412 7.999 14.097 1 32.38 ? N29 7Y0 601 B 1 HETATM 30 N N30 7Y0 . . . F 3 7.777 1.518 8.852 1 31.93 ? N30 7Y0 601 B 1 HETATM 31 N N31 7Y0 . . . F 3 8.163 6.99 10.613 1 32.6 ? N31 7Y0 601 B 1 HETATM 32 N N32 7Y0 . . . F 3 6.727 4.973 9.556 1 31.7 ? N32 7Y0 601 B 1 HETATM 33 O O33 7Y0 . . . F 3 12.369 7.821 15.513 1 31.34 ? O33 7Y0 601 B 1 HETATM 34 O O34 7Y0 . . . F 3 5.573 -1.265 11.072 1 33.03 ? O34 7Y0 601 B 1 HETATM 35 O O35 7Y0 . . . F 3 6.793 8.563 11.544 1 32.58 ? O35 7Y0 601 B 1 HETATM 36 O O36 7Y0 . . . F 3 7.724 4.319 7.599 1 32.81 ? O36 7Y0 601 B 1 HETATM 37 CL CL1 7Y0 . . . F 3 14.98 3.064 14.224 1 31.4 ? CL1 7Y0 601 B 1 HETATM 38 CL CL2 7Y0 . . . F 3 4.627 0.14 16.387 1 36.7 ? CL2 7Y0 601 B 1 HETATM 39 CL CL3 7Y0 . . . F 3 12.951 4.709 15.869 1 32 ? CL3 7Y0 601 B 1 HETATM 40 CL CL4 7Y0 . . . F 3 6.419 -0.951 14.103 1 36.85 ? CL4 7Y0 601 B 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #