data_5X24 # _model_server_result.job_id vc9EsQQjx7KjQwQJxfg5sA _model_server_result.datetime_utc '2024-12-04 18:28:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x24 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 5X24 # _exptl.entry_id 5X24 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5X24 _cell.length_a 74.858 _cell.length_b 141.777 _cell.length_c 160.656 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X24 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 417 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 435 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.269 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 398 n n P O2 PO4 sing 399 n n P O3 PO4 sing 400 n n P O4 PO4 sing 401 n n # _atom_sites.entry_id 5X24 _atom_sites.fract_transf_matrix[1][1] 0.013359 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007053 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006224 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 500 HEM HEM . C 3 LSN A 1 502 501 LSN lsn . D 3 LSN A 1 503 502 LSN lsn . E 4 PO4 A 1 504 1 PO4 PO4 . F 5 K A 1 505 1 K K . G 6 HOH A 1 601 3 HOH HOH . G 6 HOH A 2 602 119 HOH HOH . G 6 HOH A 3 603 118 HOH HOH . G 6 HOH A 4 604 62 HOH HOH . G 6 HOH A 5 605 85 HOH HOH . G 6 HOH A 6 606 23 HOH HOH . G 6 HOH A 7 607 90 HOH HOH . G 6 HOH A 8 608 56 HOH HOH . G 6 HOH A 9 609 60 HOH HOH . G 6 HOH A 10 610 102 HOH HOH . G 6 HOH A 11 611 122 HOH HOH . G 6 HOH A 12 612 49 HOH HOH . G 6 HOH A 13 613 58 HOH HOH . G 6 HOH A 14 614 25 HOH HOH . G 6 HOH A 15 615 63 HOH HOH . G 6 HOH A 16 616 20 HOH HOH . G 6 HOH A 17 617 6 HOH HOH . G 6 HOH A 18 618 55 HOH HOH . G 6 HOH A 19 619 24 HOH HOH . G 6 HOH A 20 620 105 HOH HOH . G 6 HOH A 21 621 93 HOH HOH . G 6 HOH A 22 622 66 HOH HOH . G 6 HOH A 23 623 101 HOH HOH . G 6 HOH A 24 624 92 HOH HOH . G 6 HOH A 25 625 125 HOH HOH . G 6 HOH A 26 626 111 HOH HOH . G 6 HOH A 27 627 38 HOH HOH . G 6 HOH A 28 628 1 HOH HOH . G 6 HOH A 29 629 110 HOH HOH . G 6 HOH A 30 630 112 HOH HOH . G 6 HOH A 31 631 117 HOH HOH . G 6 HOH A 32 632 96 HOH HOH . G 6 HOH A 33 633 115 HOH HOH . G 6 HOH A 34 634 108 HOH HOH . G 6 HOH A 35 635 120 HOH HOH . G 6 HOH A 36 636 95 HOH HOH . G 6 HOH A 37 637 114 HOH HOH . G 6 HOH A 38 638 113 HOH HOH . G 6 HOH A 39 639 126 HOH HOH . G 6 HOH A 40 640 27 HOH HOH . G 6 HOH A 41 641 121 HOH HOH . G 6 HOH A 42 642 16 HOH HOH . G 6 HOH A 43 643 116 HOH HOH . G 6 HOH A 44 644 39 HOH HOH . G 6 HOH A 45 645 123 HOH HOH . G 6 HOH A 46 646 104 HOH HOH . G 6 HOH A 47 647 99 HOH HOH . G 6 HOH A 48 648 109 HOH HOH . G 6 HOH A 49 649 86 HOH HOH . G 6 HOH A 50 650 19 HOH HOH . G 6 HOH A 51 651 30 HOH HOH . G 6 HOH A 52 652 98 HOH HOH . G 6 HOH A 53 653 100 HOH HOH . G 6 HOH A 54 654 103 HOH HOH . G 6 HOH A 55 655 97 HOH HOH . G 6 HOH A 56 656 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 4 14.277 -15.832 -51.3 1 116.92 ? P PO4 504 A 1 HETATM 2 O O1 PO4 . . . E 4 13.745 -15.333 -52.653 1 112.75 ? O1 PO4 504 A 1 HETATM 3 O O2 PO4 . . . E 4 15.678 -15.321 -51.005 1 113.56 ? O2 PO4 504 A 1 HETATM 4 O O3 PO4 . . . E 4 14.357 -17.341 -51.145 1 112.43 ? O3 PO4 504 A 1 HETATM 5 O O4 PO4 . . . E 4 13.264 -15.285 -50.313 1 116.2 ? O4 PO4 504 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #