data_5X26 # _model_server_result.job_id jdmZMRrYex1KPCStlJdmpQ _model_server_result.datetime_utc '2024-11-27 10:51:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x26 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 5X26 # _exptl.entry_id 5X26 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.559 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N2-[4-(4-methylpiperazin-1-yl)phenyl]-N8-phenyl-9-propan-2-yl-purine-2,8-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5X26 _cell.length_a 145.278 _cell.length_b 145.278 _cell.length_c 145.278 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X26 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H30 N8' _chem_comp.formula_weight 442.559 _chem_comp.id 7XO _chem_comp.mon_nstd_flag . _chem_comp.name N2-[4-(4-methylpiperazin-1-yl)phenyl]-N8-phenyl-9-propan-2-yl-purine-2,8-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAD CAF 7XO doub 1 n y CAD CAE 7XO sing 2 n y CAF CAH 7XO sing 3 n y CAE CAG 7XO doub 4 n y CAH CAW 7XO doub 5 n y CAG CAW 7XO sing 6 n y CAW NAV 7XO sing 7 n n NAV C8 7XO sing 8 n n C8 N7 7XO doub 9 n y C8 N9 7XO sing 10 n y N7 C5 7XO sing 11 n y N9 CBD 7XO sing 12 n n N9 C4 7XO sing 13 n y C5 C6 7XO doub 14 n y C5 C4 7XO sing 15 n y CBD CAA 7XO sing 16 n n CBD CAB 7XO sing 17 n n C6 N1 7XO sing 18 n y C4 N3 7XO doub 19 n y N1 C2 7XO doub 20 n y N3 C2 7XO sing 21 n y C2 N2 7XO sing 22 n n N2 CAX 7XO sing 23 n n CAI CAX 7XO doub 24 n y CAI CAK 7XO sing 25 n y CAX CAJ 7XO sing 26 n y CAK CAY 7XO doub 27 n y CAJ CAL 7XO doub 28 n y CAY CAL 7XO sing 29 n y CAY NBF 7XO sing 30 n n CAQ NBF 7XO sing 31 n n CAQ CAO 7XO sing 32 n n NBF CAP 7XO sing 33 n n CAO NBE 7XO sing 34 n n CAP CAN 7XO sing 35 n n NBE CAN 7XO sing 36 n n NBE CAC 7XO sing 37 n n C6 H1 7XO sing 38 n n N2 H2 7XO sing 39 n n CAP H3 7XO sing 40 n n CAP H4 7XO sing 41 n n CAN H5 7XO sing 42 n n CAN H6 7XO sing 43 n n CAC H8 7XO sing 44 n n CAC H9 7XO sing 45 n n CAC H10 7XO sing 46 n n CAO H11 7XO sing 47 n n CAO H12 7XO sing 48 n n CAQ H13 7XO sing 49 n n CAQ H14 7XO sing 50 n n CAL H15 7XO sing 51 n n CAJ H16 7XO sing 52 n n CAK H17 7XO sing 53 n n CAI H18 7XO sing 54 n n CBD H19 7XO sing 55 n n CAB H20 7XO sing 56 n n CAB H21 7XO sing 57 n n CAB H22 7XO sing 58 n n CAA H23 7XO sing 59 n n CAA H24 7XO sing 60 n n CAA H25 7XO sing 61 n n NAV H26 7XO sing 62 n n CAG H27 7XO sing 63 n n CAE H28 7XO sing 64 n n CAD H29 7XO sing 65 n n CAF H30 7XO sing 66 n n CAH H31 7XO sing 67 n n # _atom_sites.entry_id 5X26 _atom_sites.fract_transf_matrix[1][1] 0.006883 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006883 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006883 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7XO A 1 1101 1 7XO DRG . C 3 CL A 1 1102 1 CL CL . D 4 HOH A 1 1201 36 HOH HOH . D 4 HOH A 2 1202 29 HOH HOH . D 4 HOH A 3 1203 3 HOH HOH . D 4 HOH A 4 1204 28 HOH HOH . D 4 HOH A 5 1205 22 HOH HOH . D 4 HOH A 6 1206 25 HOH HOH . D 4 HOH A 7 1207 7 HOH HOH . D 4 HOH A 8 1208 10 HOH HOH . D 4 HOH A 9 1209 8 HOH HOH . D 4 HOH A 10 1210 1 HOH HOH . D 4 HOH A 11 1211 26 HOH HOH . D 4 HOH A 12 1212 32 HOH HOH . D 4 HOH A 13 1213 27 HOH HOH . D 4 HOH A 14 1214 20 HOH HOH . D 4 HOH A 15 1215 37 HOH HOH . D 4 HOH A 16 1216 11 HOH HOH . D 4 HOH A 17 1217 23 HOH HOH . D 4 HOH A 18 1218 31 HOH HOH . D 4 HOH A 19 1219 15 HOH HOH . D 4 HOH A 20 1220 24 HOH HOH . D 4 HOH A 21 1221 41 HOH HOH . D 4 HOH A 22 1222 14 HOH HOH . D 4 HOH A 23 1223 35 HOH HOH . D 4 HOH A 24 1224 19 HOH HOH . D 4 HOH A 25 1225 30 HOH HOH . D 4 HOH A 26 1226 39 HOH HOH . D 4 HOH A 27 1227 12 HOH HOH . D 4 HOH A 28 1228 9 HOH HOH . D 4 HOH A 29 1229 2 HOH HOH . D 4 HOH A 30 1230 6 HOH HOH . D 4 HOH A 31 1231 40 HOH HOH . D 4 HOH A 32 1232 13 HOH HOH . D 4 HOH A 33 1233 38 HOH HOH . D 4 HOH A 34 1234 5 HOH HOH . D 4 HOH A 35 1235 16 HOH HOH . D 4 HOH A 36 1236 17 HOH HOH . D 4 HOH A 37 1237 34 HOH HOH . D 4 HOH A 38 1238 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 7XO . . . B 2 -52.515 0.077 -21.777 1 50.51 ? C4 7XO 1101 A 1 HETATM 2 C C5 7XO . . . B 2 -53.424 0.737 -22.567 1 49.21 ? C5 7XO 1101 A 1 HETATM 3 C C6 7XO . . . B 2 -54.373 1.528 -21.973 1 50.68 ? C6 7XO 1101 A 1 HETATM 4 C C8 7XO . . . B 2 -52.143 -0.369 -23.838 1 58.13 ? C8 7XO 1101 A 1 HETATM 5 N N1 7XO . . . B 2 -54.386 1.636 -20.677 1 44.47 ? N1 7XO 1101 A 1 HETATM 6 N N2 7XO . . . B 2 -53.602 1.166 -18.64 1 51.07 ? N2 7XO 1101 A 1 HETATM 7 N N3 7XO . . . B 2 -52.565 0.21 -20.454 1 49.72 ? N3 7XO 1101 A 1 HETATM 8 C CAP 7XO . . . B 2 -50.333 -0.134 -13.518 1 68.21 ? CAP 7XO 1101 A 1 HETATM 9 C CAN 7XO . . . B 2 -50.31 -1.331 -12.592 1 73.8 ? CAN 7XO 1101 A 1 HETATM 10 N NBE 7XO . . . B 2 -49.015 -1.971 -12.757 1 84.98 ? NBE 7XO 1101 A 1 HETATM 11 C CAC 7XO . . . B 2 -48.853 -2.978 -11.713 1 85.87 ? CAC 7XO 1101 A 1 HETATM 12 C CAO 7XO . . . B 2 -48.963 -2.607 -14.072 1 80.11 ? CAO 7XO 1101 A 1 HETATM 13 C CAQ 7XO . . . B 2 -48.981 -1.534 -15.153 1 72.31 ? CAQ 7XO 1101 A 1 HETATM 14 N NBF 7XO . . . B 2 -50.082 -0.598 -14.884 1 72.24 ? NBF 7XO 1101 A 1 HETATM 15 C CAY 7XO . . . B 2 -50.944 -0.172 -15.882 1 63.19 ? CAY 7XO 1101 A 1 HETATM 16 C CAL 7XO . . . B 2 -51.941 0.706 -15.524 1 59.9 ? CAL 7XO 1101 A 1 HETATM 17 C CAJ 7XO . . . B 2 -52.83 1.148 -16.477 1 57.63 ? CAJ 7XO 1101 A 1 HETATM 18 C CAK 7XO . . . B 2 -50.838 -0.613 -17.189 1 58.88 ? CAK 7XO 1101 A 1 HETATM 19 C CAI 7XO . . . B 2 -51.733 -0.168 -18.149 1 52.13 ? CAI 7XO 1101 A 1 HETATM 20 C CAX 7XO . . . B 2 -52.724 0.715 -17.78 1 55.98 ? CAX 7XO 1101 A 1 HETATM 21 C C2 7XO . . . B 2 -53.504 0.992 -19.929 1 49.58 ? C2 7XO 1101 A 1 HETATM 22 N N7 7XO . . . B 2 -53.174 0.442 -23.833 1 52.06 ? N7 7XO 1101 A 1 HETATM 23 N N9 7XO . . . B 2 -51.751 -0.591 -22.609 1 56.09 ? N9 7XO 1101 A 1 HETATM 24 C CBD 7XO . . . B 2 -50.636 -1.431 -22.235 1 56.14 ? CBD 7XO 1101 A 1 HETATM 25 C CAB 7XO . . . B 2 -49.954 -0.789 -21.042 1 54.17 ? CAB 7XO 1101 A 1 HETATM 26 C CAA 7XO . . . B 2 -51.154 -2.822 -21.913 1 59.19 ? CAA 7XO 1101 A 1 HETATM 27 N NAV 7XO . . . B 2 -51.596 -0.886 -24.917 1 61.37 ? NAV 7XO 1101 A 1 HETATM 28 C CAW 7XO . . . B 2 -51.917 -0.424 -26.111 1 59.56 ? CAW 7XO 1101 A 1 HETATM 29 C CAG 7XO . . . B 2 -52.263 0.901 -26.281 1 59.52 ? CAG 7XO 1101 A 1 HETATM 30 C CAE 7XO . . . B 2 -52.592 1.374 -27.541 1 61.17 ? CAE 7XO 1101 A 1 HETATM 31 C CAD 7XO . . . B 2 -52.58 0.523 -28.628 1 55.25 ? CAD 7XO 1101 A 1 HETATM 32 C CAF 7XO . . . B 2 -52.241 -0.802 -28.451 1 58.75 ? CAF 7XO 1101 A 1 HETATM 33 C CAH 7XO . . . B 2 -51.907 -1.274 -27.196 1 61.89 ? CAH 7XO 1101 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 54 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 876 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 33 #