data_5X2T # _model_server_result.job_id JcKZLREZ2boE2r9eA6KWmg _model_server_result.datetime_utc '2024-11-24 01:53:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x2t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":202}' # _entry.id 5X2T # _exptl.entry_id 5X2T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 361.819 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.38 _cell.angle_gamma 90 _cell.entry_id 5X2T _cell.length_a 228.494 _cell.length_b 55.024 _cell.length_c 138.504 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X2T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 ? tetrameric 4 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,M,N,O,P 1 1 E,F,G,H,Q,R,S,T 2 1 I,J,K,L,U,V,W,X,Y 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id V _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 M NI HNI . A HNI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc2 B NE2 HIS 92 B HIS 92 1_555 N FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc3 C NE2 HIS 87 C HIS 87 1_555 O FE HEM . C HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc4 D NE2 HIS 92 D HIS 92 1_555 P NI HNI . D HNI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc5 E NE2 HIS 87 E HIS 87 1_555 Q NI HNI . E HNI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc6 F NE2 HIS 92 F HIS 92 1_555 R FE HEM . F HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc7 G NE2 HIS 87 G HIS 87 1_555 S FE HEM . G HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc8 H NE2 HIS 92 H HIS 92 1_555 T NI HNI . H HNI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc9 J NE2 HIS 92 J HIS 92 1_555 W FE HEM . J HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? # _chem_comp.formula 'C19 H20 Cl N O4' _chem_comp.formula_weight 361.819 _chem_comp.id PEM _chem_comp.mon_nstd_flag . _chem_comp.name '2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PEM sing 378 n y C1 C6 PEM doub 379 n y C1 C7 PEM sing 380 n n C2 C3 PEM doub 381 n y C2 H21 PEM sing 382 n n C3 C4 PEM sing 383 n y C3 H31 PEM sing 384 n n C4 C5 PEM doub 385 n y C4 CL PEM sing 386 n n C5 C6 PEM sing 387 n y C5 H51 PEM sing 388 n n C6 HC6 PEM sing 389 n n C7 O1 PEM doub 390 n n C7 N1 PEM sing 391 n n N1 C8 PEM sing 392 n n N1 HN1 PEM sing 393 n n C8 C9 PEM sing 394 n n C8 HC81 PEM sing 395 n n C8 HC82 PEM sing 396 n n C9 C13 PEM sing 397 n n C9 HC91 PEM sing 398 n n C9 HC92 PEM sing 399 n n C10 C11 PEM sing 400 n y C10 C15 PEM doub 401 n y C10 O2 PEM sing 402 n n C11 C12 PEM doub 403 n y C11 H11 PEM sing 404 n n C12 C13 PEM sing 405 n y C12 H12 PEM sing 406 n n C13 C14 PEM doub 407 n y C14 C15 PEM sing 408 n y C14 H14 PEM sing 409 n n C15 H15 PEM sing 410 n n O2 C16 PEM sing 411 n n C16 C17 PEM sing 412 n n C16 C18 PEM sing 413 n n C16 C19 PEM sing 414 n n C17 H171 PEM sing 415 n n C17 H172 PEM sing 416 n n C17 H173 PEM sing 417 n n C18 H181 PEM sing 418 n n C18 H182 PEM sing 419 n n C18 H183 PEM sing 420 n n C19 O3 PEM sing 421 n n C19 O4 PEM doub 422 n n O3 HO3 PEM sing 423 n n # _atom_sites.entry_id 5X2T _atom_sites.fract_transf_matrix[1][1] 0.004376 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001041 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007421 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 HNI A 1 201 142 HNI HNI . N 4 HEM B 1 201 147 HEM HEM . O 4 HEM C 1 201 142 HEM HEM . P 3 HNI D 1 201 147 HNI HNI . Q 3 HNI E 1 201 142 HNI HNI . R 4 HEM F 1 201 147 HEM HEM . S 4 HEM G 1 201 142 HEM HEM . T 3 HNI H 1 201 147 HNI HNI . U 3 HNI I 1 201 142 HNI HNI . V 5 PEM I 1 202 1 PEM PEM . W 4 HEM J 1 201 147 HEM HEM . X 4 HEM K 1 201 142 HEM HEM . Y 3 HNI L 1 201 147 HNI HNI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEM . . . V 5 23.169 4.733 84.083 1 119.83 ? C1 PEM 202 I 1 HETATM 2 C C2 PEM . . . V 5 24.235 5.465 84.625 1 118.64 ? C2 PEM 202 I 1 HETATM 3 C C3 PEM . . . V 5 25.031 4.889 85.622 1 118 ? C3 PEM 202 I 1 HETATM 4 C C4 PEM . . . V 5 24.751 3.593 86.074 1 117.8 ? C4 PEM 202 I 1 HETATM 5 C C5 PEM . . . V 5 23.682 2.869 85.541 1 118.74 ? C5 PEM 202 I 1 HETATM 6 C C6 PEM . . . V 5 22.888 3.443 84.545 1 119.41 ? C6 PEM 202 I 1 HETATM 7 CL CL PEM . . . V 5 25.753 2.838 87.353 1 117.13 ? CL PEM 202 I 1 HETATM 8 C C7 PEM . . . V 5 22.28 5.336 83.029 1 121.75 ? C7 PEM 202 I 1 HETATM 9 O O1 PEM . . . V 5 22.359 4.922 81.882 1 121.56 ? O1 PEM 202 I 1 HETATM 10 N N1 PEM . . . V 5 21.409 6.296 83.369 1 123.42 ? N1 PEM 202 I 1 HETATM 11 C C8 PEM . . . V 5 20.663 6.326 84.625 1 124.83 ? C8 PEM 202 I 1 HETATM 12 C C9 PEM . . . V 5 19.496 5.334 84.65 1 126.14 ? C9 PEM 202 I 1 HETATM 13 C C10 PEM . . . V 5 15.689 7.166 83.736 1 127.63 ? C10 PEM 202 I 1 HETATM 14 C C11 PEM . . . V 5 15.778 6.14 84.695 1 127.38 ? C11 PEM 202 I 1 HETATM 15 C C12 PEM . . . V 5 17.016 5.561 84.995 1 126.85 ? C12 PEM 202 I 1 HETATM 16 C C13 PEM . . . V 5 18.166 5.987 84.322 1 126.95 ? C13 PEM 202 I 1 HETATM 17 C C14 PEM . . . V 5 18.07 6.985 83.337 1 127.34 ? C14 PEM 202 I 1 HETATM 18 C C15 PEM . . . V 5 16.838 7.574 83.047 1 127.53 ? C15 PEM 202 I 1 HETATM 19 O O2 PEM . . . V 5 14.482 7.753 83.401 1 127.35 ? O2 PEM 202 I 1 HETATM 20 C C16 PEM . . . V 5 13.68 8.614 84.228 1 126.55 ? C16 PEM 202 I 1 HETATM 21 C C17 PEM . . . V 5 12.869 9.503 83.29 1 125.69 ? C17 PEM 202 I 1 HETATM 22 C C18 PEM . . . V 5 14.524 9.525 85.123 1 126.2 ? C18 PEM 202 I 1 HETATM 23 C C19 PEM . . . V 5 12.713 7.765 85.041 1 127.24 ? C19 PEM 202 I 1 HETATM 24 O O3 PEM . . . V 5 12.327 6.666 84.564 1 127.16 ? O3 PEM 202 I 1 HETATM 25 O O4 PEM . . . V 5 12.309 8.167 86.159 1 127.62 ? O4 PEM 202 I 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 25 #