data_5X38 # _model_server_result.job_id PqAf5mG0FPEnA1UqipJqRw _model_server_result.datetime_utc '2024-12-21 05:24:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 5X38 # _exptl.entry_id 5X38 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 8 A CYS 8 1_555 A SG CYS 25 A CYS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 19 A CYS 19 1_555 A SG CYS 35 A CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? covale ? covale1 A OG SER 3 A SER 3 1_555 B C1 BGC . A BGC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 29 n n C2 C1 BGC sing 30 n n C2 O2 BGC sing 31 n n C2 H2 BGC sing 32 n n C3 C4 BGC sing 33 n n C3 O3 BGC sing 34 n n C3 H3 BGC sing 35 n n C4 C5 BGC sing 36 n n C4 O4 BGC sing 37 n n C4 H4 BGC sing 38 n n C5 C6 BGC sing 39 n n C5 O5 BGC sing 40 n n C5 H5 BGC sing 41 n n C6 O6 BGC sing 42 n n C6 H61 BGC sing 43 n n C6 H62 BGC sing 44 n n C1 O1 BGC sing 45 n n C1 O5 BGC sing 46 n n C1 H1 BGC sing 47 n n O1 HO1 BGC sing 48 n n O2 HO2 BGC sing 49 n n O3 HO3 BGC sing 50 n n O4 HO4 BGC sing 51 n n O6 HO6 BGC sing 52 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 5X38 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id BGC _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 101 _pdbx_nonpoly_scheme.pdb_mon_id BGC _pdbx_nonpoly_scheme.auth_mon_id BGC _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . B 2 7.618 3.156 0.705 1 0 ? C2 BGC 101 A 1 HETATM 2 C C3 BGC . . . B 2 7.544 1.657 0.939 1 0 ? C3 BGC 101 A 1 HETATM 3 C C4 BGC . . . B 2 8.234 1.332 2.238 1 0 ? C4 BGC 101 A 1 HETATM 4 C C5 BGC . . . B 2 7.527 2.067 3.379 1 0 ? C5 BGC 101 A 1 HETATM 5 C C6 BGC . . . B 2 8.194 1.84 4.715 1 0 ? C6 BGC 101 A 1 HETATM 6 C C1 BGC . . . B 2 6.927 3.893 1.859 1 0 ? C1 BGC 101 A 1 HETATM 7 O O2 BGC . . . B 2 7.006 3.503 -0.525 1 0 ? O2 BGC 101 A 1 HETATM 8 O O3 BGC . . . B 2 8.168 0.942 -0.108 1 0 ? O3 BGC 101 A 1 HETATM 9 O O4 BGC . . . B 2 8.214 -0.07 2.436 1 0 ? O4 BGC 101 A 1 HETATM 10 O O5 BGC . . . B 2 7.544 3.509 3.117 1 0 ? O5 BGC 101 A 1 HETATM 11 O O6 BGC . . . B 2 7.609 2.641 5.731 1 0 ? O6 BGC 101 A 1 HETATM 12 H H2 BGC . . . B 2 8.668 3.479 0.696 1 0 ? H2 BGC 101 A 1 HETATM 13 H H3 BGC . . . B 2 6.483 1.375 1.028 1 0 ? H3 BGC 101 A 1 HETATM 14 H H4 BGC . . . B 2 9.274 1.684 2.168 1 0 ? H4 BGC 101 A 1 HETATM 15 H H5 BGC . . . B 2 6.47 1.762 3.42 1 0 ? H5 BGC 101 A 1 HETATM 16 H H61 BGC . . . B 2 9.269 2.039 4.61 1 0 ? H61 BGC 101 A 1 HETATM 17 H H62 BGC . . . B 2 8.075 0.781 4.983 1 0 ? H62 BGC 101 A 1 HETATM 18 H H1 BGC . . . B 2 5.873 3.577 1.883 1 0 ? H1 BGC 101 A 1 HETATM 19 H HO2 BGC . . . B 2 7.01 4.467 -0.568 1 0 ? HO2 BGC 101 A 1 HETATM 20 H HO3 BGC . . . B 2 8.08 0.013 0.137 1 0 ? HO3 BGC 101 A 1 HETATM 21 H HO4 BGC . . . B 2 8.727 -0.261 3.232 1 0 ? HO4 BGC 101 A 1 HETATM 22 H HO6 BGC . . . B 2 7.749 3.575 5.52 1 0 ? HO6 BGC 101 A 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 6438 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 22 #