data_5X4M # _model_server_result.job_id 4jFkNocuQ4PiCbjiXOU-vQ _model_server_result.datetime_utc '2024-11-14 04:44:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x4m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 5X4M # _exptl.entry_id 5X4M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 187.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-phenyl-1,3,5-triazine-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5X4M _cell.length_a 66.425 _cell.length_b 66.425 _cell.length_c 152.192 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X4M _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H9 N5' _chem_comp.formula_weight 187.201 _chem_comp.id 7ZF _chem_comp.mon_nstd_flag . _chem_comp.name N-phenyl-1,3,5-triazine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 7ZF doub 1 n y C2 C4 7ZF sing 2 n y C1 C3 7ZF sing 3 n y C4 C7 7ZF doub 4 n y C3 C5 7ZF doub 5 n y C7 C5 7ZF sing 6 n y C7 N14 7ZF sing 7 n n N14 C9 7ZF sing 8 n n C9 N11 7ZF doub 9 n y C9 N12 7ZF sing 10 n y N11 C6 7ZF sing 11 n y N12 C8 7ZF doub 12 n y C6 N10 7ZF doub 13 n y C8 N10 7ZF sing 14 n y C8 N13 7ZF sing 15 n n C4 H1 7ZF sing 16 n n C5 H2 7ZF sing 17 n n C6 H3 7ZF sing 18 n n C1 H4 7ZF sing 19 n n C2 H5 7ZF sing 20 n n C3 H6 7ZF sing 21 n n N13 H7 7ZF sing 22 n n N13 H8 7ZF sing 23 n n N14 H9 7ZF sing 24 n n # _atom_sites.entry_id 5X4M _atom_sites.fract_transf_matrix[1][1] 0.015055 _atom_sites.fract_transf_matrix[1][2] 0.008692 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017384 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006571 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7ZF A 1 801 801 7ZF LIG . C 3 HOH A 1 901 35 HOH HOH . C 3 HOH A 2 902 19 HOH HOH . C 3 HOH A 3 903 33 HOH HOH . C 3 HOH A 4 904 67 HOH HOH . C 3 HOH A 5 905 82 HOH HOH . C 3 HOH A 6 906 23 HOH HOH . C 3 HOH A 7 907 38 HOH HOH . C 3 HOH A 8 908 24 HOH HOH . C 3 HOH A 9 909 29 HOH HOH . C 3 HOH A 10 910 30 HOH HOH . C 3 HOH A 11 911 49 HOH HOH . C 3 HOH A 12 912 81 HOH HOH . C 3 HOH A 13 913 50 HOH HOH . C 3 HOH A 14 914 88 HOH HOH . C 3 HOH A 15 915 14 HOH HOH . C 3 HOH A 16 916 75 HOH HOH . C 3 HOH A 17 917 64 HOH HOH . C 3 HOH A 18 918 20 HOH HOH . C 3 HOH A 19 919 51 HOH HOH . C 3 HOH A 20 920 46 HOH HOH . C 3 HOH A 21 921 15 HOH HOH . C 3 HOH A 22 922 84 HOH HOH . C 3 HOH A 23 923 61 HOH HOH . C 3 HOH A 24 924 32 HOH HOH . C 3 HOH A 25 925 21 HOH HOH . C 3 HOH A 26 926 31 HOH HOH . C 3 HOH A 27 927 93 HOH HOH . C 3 HOH A 28 928 56 HOH HOH . C 3 HOH A 29 929 2 HOH HOH . C 3 HOH A 30 930 22 HOH HOH . C 3 HOH A 31 931 36 HOH HOH . C 3 HOH A 32 932 5 HOH HOH . C 3 HOH A 33 933 34 HOH HOH . C 3 HOH A 34 934 10 HOH HOH . C 3 HOH A 35 935 73 HOH HOH . C 3 HOH A 36 936 28 HOH HOH . C 3 HOH A 37 937 7 HOH HOH . C 3 HOH A 38 938 1 HOH HOH . C 3 HOH A 39 939 13 HOH HOH . C 3 HOH A 40 940 3 HOH HOH . C 3 HOH A 41 941 66 HOH HOH . C 3 HOH A 42 942 76 HOH HOH . C 3 HOH A 43 943 12 HOH HOH . C 3 HOH A 44 944 39 HOH HOH . C 3 HOH A 45 945 17 HOH HOH . C 3 HOH A 46 946 85 HOH HOH . C 3 HOH A 47 947 52 HOH HOH . C 3 HOH A 48 948 18 HOH HOH . C 3 HOH A 49 949 16 HOH HOH . C 3 HOH A 50 950 45 HOH HOH . C 3 HOH A 51 951 11 HOH HOH . C 3 HOH A 52 952 6 HOH HOH . C 3 HOH A 53 953 72 HOH HOH . C 3 HOH A 54 954 40 HOH HOH . C 3 HOH A 55 955 37 HOH HOH . C 3 HOH A 56 956 47 HOH HOH . C 3 HOH A 57 957 41 HOH HOH . C 3 HOH A 58 958 8 HOH HOH . C 3 HOH A 59 959 91 HOH HOH . C 3 HOH A 60 960 79 HOH HOH . C 3 HOH A 61 961 80 HOH HOH . C 3 HOH A 62 962 57 HOH HOH . C 3 HOH A 63 963 44 HOH HOH . C 3 HOH A 64 964 55 HOH HOH . C 3 HOH A 65 965 54 HOH HOH . C 3 HOH A 66 966 78 HOH HOH . C 3 HOH A 67 967 42 HOH HOH . C 3 HOH A 68 968 4 HOH HOH . C 3 HOH A 69 969 27 HOH HOH . C 3 HOH A 70 970 70 HOH HOH . C 3 HOH A 71 971 26 HOH HOH . C 3 HOH A 72 972 89 HOH HOH . C 3 HOH A 73 973 83 HOH HOH . C 3 HOH A 74 974 9 HOH HOH . C 3 HOH A 75 975 71 HOH HOH . C 3 HOH A 76 976 58 HOH HOH . C 3 HOH A 77 977 25 HOH HOH . C 3 HOH A 78 978 74 HOH HOH . C 3 HOH A 79 979 77 HOH HOH . C 3 HOH A 80 980 63 HOH HOH . C 3 HOH A 81 981 95 HOH HOH . C 3 HOH A 82 982 90 HOH HOH . C 3 HOH A 83 983 69 HOH HOH . C 3 HOH A 84 984 65 HOH HOH . C 3 HOH A 85 985 53 HOH HOH . C 3 HOH A 86 986 96 HOH HOH . C 3 HOH A 87 987 92 HOH HOH . C 3 HOH A 88 988 94 HOH HOH . C 3 HOH A 89 989 62 HOH HOH . C 3 HOH A 90 990 68 HOH HOH . C 3 HOH A 91 991 87 HOH HOH . C 3 HOH A 92 992 43 HOH HOH . C 3 HOH A 93 993 48 HOH HOH . C 3 HOH A 94 994 60 HOH HOH . C 3 HOH A 95 995 97 HOH HOH . C 3 HOH A 96 996 86 HOH HOH . C 3 HOH A 97 997 59 HOH HOH . C 3 HOH A 98 998 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 7ZF . . . B 2 39.413 -8.311 -15.121 1 42.25 ? C4 7ZF 801 A 1 HETATM 2 C C5 7ZF . . . B 2 39.106 -6.225 -13.991 1 43.24 ? C5 7ZF 801 A 1 HETATM 3 C C6 7ZF . A . B 2 38.888 -7.44 -10.04 0.5 40.42 ? C6 7ZF 801 A 1 HETATM 4 C C6 7ZF . B . B 2 36.463 -8.909 -10.139 0.5 36.81 ? C6 7ZF 801 A 1 HETATM 5 C C7 7ZF . . . B 2 38.793 -7.565 -14.146 1 41.77 ? C7 7ZF 801 A 1 HETATM 6 C C8 7ZF . A . B 2 37.045 -8.688 -9.932 0.5 38.09 ? C8 7ZF 801 A 1 HETATM 7 C C8 7ZF . B . B 2 38.2 -7.514 -9.828 0.5 38.55 ? C8 7ZF 801 A 1 HETATM 8 N N12 7ZF . A . B 2 36.947 -8.807 -11.266 0.5 37.84 ? N12 7ZF 801 A 1 HETATM 9 N N12 7ZF . B . B 2 38.445 -7.495 -11.142 0.5 37.91 ? N12 7ZF 801 A 1 HETATM 10 C C1 7ZF . . . B 2 40.665 -6.398 -15.784 1 45.02 ? C1 7ZF 801 A 1 HETATM 11 C C2 7ZF . . . B 2 40.352 -7.732 -15.941 1 43.71 ? C2 7ZF 801 A 1 HETATM 12 C C3 7ZF . . . B 2 40.043 -5.641 -14.81 1 44.65 ? C3 7ZF 801 A 1 HETATM 13 C C9 7ZF . A . B 2 37.897 -8.166 -11.939 0.5 39.83 ? C9 7ZF 801 A 1 HETATM 14 C C9 7ZF . B . B 2 37.642 -8.212 -11.936 0.5 38.56 ? C9 7ZF 801 A 1 HETATM 15 N N10 7ZF . A . B 2 37.99 -8.027 -9.256 0.5 40.16 ? N10 7ZF 801 A 1 HETATM 16 N N10 7ZF . B . B 2 37.201 -8.221 -9.265 0.5 37.59 ? N10 7ZF 801 A 1 HETATM 17 N N11 7ZF . A . B 2 38.886 -7.465 -11.366 0.5 39.88 ? N11 7ZF 801 A 1 HETATM 18 N N11 7ZF . B . B 2 36.62 -8.947 -11.473 0.5 35.71 ? N11 7ZF 801 A 1 HETATM 19 N N13 7ZF . A . B 2 36.084 -9.313 -9.196 0.5 34.26 ? N13 7ZF 801 A 1 HETATM 20 N N13 7ZF . B . B 2 39.06 -6.744 -9.015 0.5 38.39 ? N13 7ZF 801 A 1 HETATM 21 N N14 7ZF . . . B 2 37.845 -8.219 -13.337 1 40.06 ? N14 7ZF 801 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #