data_5X5A # _model_server_result.job_id tIOKN964iCS0yQzVvtz51g _model_server_result.datetime_utc '2024-10-19 05:25:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x5a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 5X5A # _exptl.entry_id 5X5A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5X5A _cell.length_a 109.533 _cell.length_b 109.533 _cell.length_c 317.467 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X5A _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G,J,M,P 1 1 B,E,H,K,N,Q 2 1 C,F,I,L,O,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 5X5A _atom_sites.fract_transf_matrix[1][1] 0.00913 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00913 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00315 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 PO4 A 1 401 1 PO4 PO4 . H 2 PO4 B 1 401 5 PO4 PO4 . I 2 PO4 C 1 401 3 PO4 PO4 . J 2 PO4 D 1 401 4 PO4 PO4 . K 2 PO4 E 1 401 2 PO4 PO4 . L 2 PO4 F 1 401 6 PO4 PO4 . M 3 HOH A 1 501 49 HOH HOH . M 3 HOH A 2 502 191 HOH HOH . M 3 HOH A 3 503 769 HOH HOH . M 3 HOH A 4 504 185 HOH HOH . M 3 HOH A 5 505 55 HOH HOH . M 3 HOH A 6 506 768 HOH HOH . M 3 HOH A 7 507 11 HOH HOH . M 3 HOH A 8 508 776 HOH HOH . M 3 HOH A 9 509 775 HOH HOH . M 3 HOH A 10 510 338 HOH HOH . M 3 HOH A 11 511 406 HOH HOH . M 3 HOH A 12 512 16 HOH HOH . M 3 HOH A 13 513 767 HOH HOH . M 3 HOH A 14 514 108 HOH HOH . M 3 HOH A 15 515 67 HOH HOH . M 3 HOH A 16 516 171 HOH HOH . M 3 HOH A 17 517 771 HOH HOH . M 3 HOH A 18 518 263 HOH HOH . M 3 HOH A 19 519 305 HOH HOH . M 3 HOH A 20 520 3 HOH HOH . M 3 HOH A 21 521 29 HOH HOH . M 3 HOH A 22 522 13 HOH HOH . M 3 HOH A 23 523 425 HOH HOH . M 3 HOH A 24 524 475 HOH HOH . M 3 HOH A 25 525 242 HOH HOH . M 3 HOH A 26 526 349 HOH HOH . M 3 HOH A 27 527 316 HOH HOH . M 3 HOH A 28 528 161 HOH HOH . M 3 HOH A 29 529 33 HOH HOH . M 3 HOH A 30 530 770 HOH HOH . M 3 HOH A 31 531 60 HOH HOH . M 3 HOH A 32 532 207 HOH HOH . M 3 HOH A 33 533 69 HOH HOH . M 3 HOH A 34 534 772 HOH HOH . M 3 HOH A 35 535 264 HOH HOH . M 3 HOH A 36 536 774 HOH HOH . M 3 HOH A 37 537 265 HOH HOH . M 3 HOH A 38 538 84 HOH HOH . M 3 HOH A 39 539 740 HOH HOH . M 3 HOH A 40 540 302 HOH HOH . M 3 HOH A 41 541 803 HOH HOH . M 3 HOH A 42 542 773 HOH HOH . M 3 HOH A 43 543 804 HOH HOH . M 3 HOH A 44 544 735 HOH HOH . N 3 HOH B 1 501 444 HOH HOH . N 3 HOH B 2 502 454 HOH HOH . N 3 HOH B 3 503 785 HOH HOH . N 3 HOH B 4 504 287 HOH HOH . N 3 HOH B 5 505 149 HOH HOH . N 3 HOH B 6 506 308 HOH HOH . N 3 HOH B 7 507 783 HOH HOH . N 3 HOH B 8 508 31 HOH HOH . N 3 HOH B 9 509 4 HOH HOH . N 3 HOH B 10 510 394 HOH HOH . N 3 HOH B 11 511 5 HOH HOH . N 3 HOH B 12 512 787 HOH HOH . N 3 HOH B 13 513 44 HOH HOH . N 3 HOH B 14 514 58 HOH HOH . N 3 HOH B 15 515 164 HOH HOH . N 3 HOH B 16 516 141 HOH HOH . N 3 HOH B 17 517 777 HOH HOH . N 3 HOH B 18 518 140 HOH HOH . N 3 HOH B 19 519 784 HOH HOH . N 3 HOH B 20 520 199 HOH HOH . N 3 HOH B 21 521 572 HOH HOH . N 3 HOH B 22 522 100 HOH HOH . N 3 HOH B 23 523 780 HOH HOH . N 3 HOH B 24 524 79 HOH HOH . N 3 HOH B 25 525 778 HOH HOH . N 3 HOH B 26 526 410 HOH HOH . N 3 HOH B 27 527 254 HOH HOH . N 3 HOH B 28 528 249 HOH HOH . N 3 HOH B 29 529 143 HOH HOH . N 3 HOH B 30 530 307 HOH HOH . N 3 HOH B 31 531 326 HOH HOH . N 3 HOH B 32 532 104 HOH HOH . N 3 HOH B 33 533 137 HOH HOH . N 3 HOH B 34 534 153 HOH HOH . N 3 HOH B 35 535 779 HOH HOH . N 3 HOH B 36 536 741 HOH HOH . N 3 HOH B 37 537 282 HOH HOH . N 3 HOH B 38 538 786 HOH HOH . N 3 HOH B 39 539 520 HOH HOH . N 3 HOH B 40 540 736 HOH HOH . N 3 HOH B 41 541 781 HOH HOH . N 3 HOH B 42 542 761 HOH HOH . N 3 HOH B 43 543 746 HOH HOH . N 3 HOH B 44 544 782 HOH HOH . O 3 HOH C 1 501 51 HOH HOH . O 3 HOH C 2 502 156 HOH HOH . O 3 HOH C 3 503 70 HOH HOH . O 3 HOH C 4 504 12 HOH HOH . O 3 HOH C 5 505 2 HOH HOH . O 3 HOH C 6 506 99 HOH HOH . O 3 HOH C 7 507 28 HOH HOH . O 3 HOH C 8 508 10 HOH HOH . O 3 HOH C 9 509 789 HOH HOH . O 3 HOH C 10 510 120 HOH HOH . O 3 HOH C 11 511 613 HOH HOH . O 3 HOH C 12 512 230 HOH HOH . O 3 HOH C 13 513 252 HOH HOH . O 3 HOH C 14 514 356 HOH HOH . O 3 HOH C 15 515 90 HOH HOH . O 3 HOH C 16 516 19 HOH HOH . O 3 HOH C 17 517 472 HOH HOH . O 3 HOH C 18 518 329 HOH HOH . O 3 HOH C 19 519 105 HOH HOH . O 3 HOH C 20 520 160 HOH HOH . O 3 HOH C 21 521 148 HOH HOH . O 3 HOH C 22 522 129 HOH HOH . O 3 HOH C 23 523 213 HOH HOH . O 3 HOH C 24 524 456 HOH HOH . O 3 HOH C 25 525 116 HOH HOH . O 3 HOH C 26 526 9 HOH HOH . O 3 HOH C 27 527 764 HOH HOH . O 3 HOH C 28 528 750 HOH HOH . O 3 HOH C 29 529 790 HOH HOH . O 3 HOH C 30 530 751 HOH HOH . O 3 HOH C 31 531 791 HOH HOH . P 3 HOH D 1 501 24 HOH HOH . P 3 HOH D 2 502 806 HOH HOH . P 3 HOH D 3 503 268 HOH HOH . P 3 HOH D 4 504 123 HOH HOH . P 3 HOH D 5 505 794 HOH HOH . P 3 HOH D 6 506 805 HOH HOH . P 3 HOH D 7 507 258 HOH HOH . P 3 HOH D 8 508 115 HOH HOH . P 3 HOH D 9 509 74 HOH HOH . P 3 HOH D 10 510 54 HOH HOH . P 3 HOH D 11 511 26 HOH HOH . P 3 HOH D 12 512 76 HOH HOH . P 3 HOH D 13 513 295 HOH HOH . P 3 HOH D 14 514 107 HOH HOH . P 3 HOH D 15 515 335 HOH HOH . P 3 HOH D 16 516 25 HOH HOH . P 3 HOH D 17 517 34 HOH HOH . P 3 HOH D 18 518 92 HOH HOH . P 3 HOH D 19 519 293 HOH HOH . P 3 HOH D 20 520 342 HOH HOH . P 3 HOH D 21 521 111 HOH HOH . P 3 HOH D 22 522 240 HOH HOH . P 3 HOH D 23 523 184 HOH HOH . P 3 HOH D 24 524 195 HOH HOH . P 3 HOH D 25 525 45 HOH HOH . P 3 HOH D 26 526 203 HOH HOH . P 3 HOH D 27 527 103 HOH HOH . P 3 HOH D 28 528 403 HOH HOH . P 3 HOH D 29 529 433 HOH HOH . P 3 HOH D 30 530 110 HOH HOH . P 3 HOH D 31 531 344 HOH HOH . P 3 HOH D 32 532 152 HOH HOH . P 3 HOH D 33 533 434 HOH HOH . P 3 HOH D 34 534 255 HOH HOH . P 3 HOH D 35 535 280 HOH HOH . P 3 HOH D 36 536 766 HOH HOH . P 3 HOH D 37 537 793 HOH HOH . P 3 HOH D 38 538 792 HOH HOH . Q 3 HOH E 1 501 797 HOH HOH . Q 3 HOH E 2 502 101 HOH HOH . Q 3 HOH E 3 503 232 HOH HOH . Q 3 HOH E 4 504 300 HOH HOH . Q 3 HOH E 5 505 253 HOH HOH . Q 3 HOH E 6 506 135 HOH HOH . Q 3 HOH E 7 507 81 HOH HOH . Q 3 HOH E 8 508 511 HOH HOH . Q 3 HOH E 9 509 37 HOH HOH . Q 3 HOH E 10 510 130 HOH HOH . Q 3 HOH E 11 511 375 HOH HOH . Q 3 HOH E 12 512 8 HOH HOH . Q 3 HOH E 13 513 380 HOH HOH . Q 3 HOH E 14 514 32 HOH HOH . Q 3 HOH E 15 515 224 HOH HOH . Q 3 HOH E 16 516 807 HOH HOH . Q 3 HOH E 17 517 788 HOH HOH . Q 3 HOH E 18 518 235 HOH HOH . Q 3 HOH E 19 519 168 HOH HOH . Q 3 HOH E 20 520 389 HOH HOH . Q 3 HOH E 21 521 35 HOH HOH . Q 3 HOH E 22 522 500 HOH HOH . Q 3 HOH E 23 523 281 HOH HOH . Q 3 HOH E 24 524 96 HOH HOH . Q 3 HOH E 25 525 223 HOH HOH . Q 3 HOH E 26 526 208 HOH HOH . Q 3 HOH E 27 527 113 HOH HOH . Q 3 HOH E 28 528 98 HOH HOH . Q 3 HOH E 29 529 41 HOH HOH . Q 3 HOH E 30 530 80 HOH HOH . Q 3 HOH E 31 531 416 HOH HOH . Q 3 HOH E 32 532 275 HOH HOH . Q 3 HOH E 33 533 102 HOH HOH . Q 3 HOH E 34 534 228 HOH HOH . Q 3 HOH E 35 535 331 HOH HOH . Q 3 HOH E 36 536 150 HOH HOH . Q 3 HOH E 37 537 320 HOH HOH . Q 3 HOH E 38 538 124 HOH HOH . Q 3 HOH E 39 539 201 HOH HOH . Q 3 HOH E 40 540 125 HOH HOH . Q 3 HOH E 41 541 795 HOH HOH . Q 3 HOH E 42 542 796 HOH HOH . R 3 HOH F 1 501 251 HOH HOH . R 3 HOH F 2 502 270 HOH HOH . R 3 HOH F 3 503 271 HOH HOH . R 3 HOH F 4 504 655 HOH HOH . R 3 HOH F 5 505 802 HOH HOH . R 3 HOH F 6 506 413 HOH HOH . R 3 HOH F 7 507 212 HOH HOH . R 3 HOH F 8 508 1 HOH HOH . R 3 HOH F 9 509 178 HOH HOH . R 3 HOH F 10 510 214 HOH HOH . R 3 HOH F 11 511 426 HOH HOH . R 3 HOH F 12 512 517 HOH HOH . R 3 HOH F 13 513 489 HOH HOH . R 3 HOH F 14 514 800 HOH HOH . R 3 HOH F 15 515 122 HOH HOH . R 3 HOH F 16 516 437 HOH HOH . R 3 HOH F 17 517 53 HOH HOH . R 3 HOH F 18 518 118 HOH HOH . R 3 HOH F 19 519 159 HOH HOH . R 3 HOH F 20 520 23 HOH HOH . R 3 HOH F 21 521 42 HOH HOH . R 3 HOH F 22 522 309 HOH HOH . R 3 HOH F 23 523 395 HOH HOH . R 3 HOH F 24 524 390 HOH HOH . R 3 HOH F 25 525 227 HOH HOH . R 3 HOH F 26 526 276 HOH HOH . R 3 HOH F 27 527 357 HOH HOH . R 3 HOH F 28 528 321 HOH HOH . R 3 HOH F 29 529 146 HOH HOH . R 3 HOH F 30 530 476 HOH HOH . R 3 HOH F 31 531 799 HOH HOH . R 3 HOH F 32 532 801 HOH HOH . R 3 HOH F 33 533 798 HOH HOH . R 3 HOH F 34 534 742 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 2 -21.409 -12.123 27.826 1 40.58 ? P PO4 401 A 1 HETATM 2 O O1 PO4 . . . G 2 -21.293 -12.92 26.549 1 41.11 ? O1 PO4 401 A 1 HETATM 3 O O2 PO4 . . . G 2 -20.795 -10.758 27.624 1 41.83 ? O2 PO4 401 A 1 HETATM 4 O O3 PO4 . . . G 2 -20.683 -12.843 28.937 1 39.43 ? O3 PO4 401 A 1 HETATM 5 O O4 PO4 . . . G 2 -22.866 -11.97 28.193 1 43.74 ? O4 PO4 401 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #