data_5X68 # _model_server_result.job_id EHcG36GcDcaeWl-SP4Zn1A _model_server_result.datetime_utc '2024-11-24 09:04:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x68 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5X68 # _exptl.entry_id 5X68 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5X68 _cell.length_a 176.736 _cell.length_b 176.736 _cell.length_c 89.434 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X68 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 143 A LEU 137 1_555 A N MLY 144 A MLY 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MLY 144 A MLY 138 1_555 A N CYS 145 A CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C MET 184 A MET 178 1_555 A N MLY 185 A MLY 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MLY 185 A MLY 179 1_555 A N LYS 186 A LYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C VAL 294 A VAL 288 1_555 A N MLY 295 A MLY 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 A C MLY 295 A MLY 289 1_555 A N CYS 296 A CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 A C PHE 301 A PHE 295 1_555 A N MLY 302 A MLY 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 A C MLY 302 A MLY 296 1_555 A N SER 303 A SER 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 B C LEU 143 B LEU 137 1_555 B N MLY 144 B MLY 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 B C MLY 144 B MLY 138 1_555 B N CYS 145 B CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 B C MET 184 B MET 178 1_555 B N MLY 185 B MLY 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 B C MLY 185 B MLY 179 1_555 B N LYS 186 B LYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 B C VAL 294 B VAL 288 1_555 B N MLY 295 B MLY 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 B C MLY 295 B MLY 289 1_555 B N CYS 296 B CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 B C PHE 301 B PHE 295 1_555 B N MLY 302 B MLY 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale16 B C MLY 302 B MLY 296 1_555 B N SER 303 B SER 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5X68 _atom_sites.fract_transf_matrix[1][1] 0.005658 _atom_sites.fract_transf_matrix[1][2] 0.003267 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011181 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 401 401 FAD FAD . D 2 FAD B 1 401 401 FAD FAD . E 3 HOH A 1 501 501 HOH HOH . E 3 HOH A 2 502 502 HOH HOH . E 3 HOH A 3 503 503 HOH HOH . E 3 HOH A 4 504 504 HOH HOH . E 3 HOH A 5 505 505 HOH HOH . E 3 HOH A 6 506 506 HOH HOH . E 3 HOH A 7 507 507 HOH HOH . E 3 HOH A 8 508 508 HOH HOH . E 3 HOH A 9 509 509 HOH HOH . E 3 HOH A 10 510 510 HOH HOH . E 3 HOH A 11 511 511 HOH HOH . E 3 HOH A 12 512 512 HOH HOH . E 3 HOH A 13 513 513 HOH HOH . E 3 HOH A 14 514 514 HOH HOH . E 3 HOH A 15 515 515 HOH HOH . E 3 HOH A 16 516 516 HOH HOH . E 3 HOH A 17 517 517 HOH HOH . E 3 HOH A 18 518 518 HOH HOH . E 3 HOH A 19 519 519 HOH HOH . E 3 HOH A 20 520 520 HOH HOH . E 3 HOH A 21 521 521 HOH HOH . E 3 HOH A 22 522 522 HOH HOH . E 3 HOH A 23 523 523 HOH HOH . E 3 HOH A 24 524 524 HOH HOH . E 3 HOH A 25 525 525 HOH HOH . E 3 HOH A 26 526 526 HOH HOH . E 3 HOH A 27 527 527 HOH HOH . E 3 HOH A 28 528 528 HOH HOH . E 3 HOH A 29 529 529 HOH HOH . E 3 HOH A 30 530 530 HOH HOH . E 3 HOH A 31 531 531 HOH HOH . E 3 HOH A 32 532 532 HOH HOH . E 3 HOH A 33 533 533 HOH HOH . E 3 HOH A 34 534 534 HOH HOH . E 3 HOH A 35 535 535 HOH HOH . E 3 HOH A 36 536 536 HOH HOH . E 3 HOH A 37 537 537 HOH HOH . E 3 HOH A 38 538 538 HOH HOH . E 3 HOH A 39 539 539 HOH HOH . E 3 HOH A 40 540 540 HOH HOH . E 3 HOH A 41 541 541 HOH HOH . E 3 HOH A 42 542 542 HOH HOH . E 3 HOH A 43 543 543 HOH HOH . E 3 HOH A 44 544 544 HOH HOH . E 3 HOH A 45 545 545 HOH HOH . E 3 HOH A 46 546 546 HOH HOH . E 3 HOH A 47 547 547 HOH HOH . E 3 HOH A 48 548 548 HOH HOH . E 3 HOH A 49 549 549 HOH HOH . E 3 HOH A 50 550 550 HOH HOH . E 3 HOH A 51 551 551 HOH HOH . E 3 HOH A 52 552 552 HOH HOH . E 3 HOH A 53 553 553 HOH HOH . E 3 HOH A 54 554 554 HOH HOH . E 3 HOH A 55 555 555 HOH HOH . E 3 HOH A 56 556 556 HOH HOH . E 3 HOH A 57 557 557 HOH HOH . E 3 HOH A 58 558 558 HOH HOH . E 3 HOH A 59 559 559 HOH HOH . E 3 HOH A 60 560 560 HOH HOH . E 3 HOH A 61 561 561 HOH HOH . E 3 HOH A 62 562 562 HOH HOH . E 3 HOH A 63 563 563 HOH HOH . E 3 HOH A 64 564 564 HOH HOH . E 3 HOH A 65 565 565 HOH HOH . E 3 HOH A 66 566 566 HOH HOH . E 3 HOH A 67 567 567 HOH HOH . E 3 HOH A 68 568 568 HOH HOH . E 3 HOH A 69 569 569 HOH HOH . E 3 HOH A 70 570 570 HOH HOH . E 3 HOH A 71 571 571 HOH HOH . E 3 HOH A 72 572 572 HOH HOH . E 3 HOH A 73 573 573 HOH HOH . E 3 HOH A 74 574 574 HOH HOH . E 3 HOH A 75 575 575 HOH HOH . E 3 HOH A 76 576 576 HOH HOH . E 3 HOH A 77 577 577 HOH HOH . F 3 HOH B 1 501 501 HOH HOH . F 3 HOH B 2 502 502 HOH HOH . F 3 HOH B 3 503 503 HOH HOH . F 3 HOH B 4 504 504 HOH HOH . F 3 HOH B 5 505 505 HOH HOH . F 3 HOH B 6 506 506 HOH HOH . F 3 HOH B 7 507 507 HOH HOH . F 3 HOH B 8 508 508 HOH HOH . F 3 HOH B 9 509 509 HOH HOH . F 3 HOH B 10 510 510 HOH HOH . F 3 HOH B 11 511 511 HOH HOH . F 3 HOH B 12 512 512 HOH HOH . F 3 HOH B 13 513 513 HOH HOH . F 3 HOH B 14 514 514 HOH HOH . F 3 HOH B 15 515 515 HOH HOH . F 3 HOH B 16 516 516 HOH HOH . F 3 HOH B 17 517 517 HOH HOH . F 3 HOH B 18 518 518 HOH HOH . F 3 HOH B 19 519 519 HOH HOH . F 3 HOH B 20 520 520 HOH HOH . F 3 HOH B 21 521 521 HOH HOH . F 3 HOH B 22 522 522 HOH HOH . F 3 HOH B 23 523 523 HOH HOH . F 3 HOH B 24 524 524 HOH HOH . F 3 HOH B 25 525 525 HOH HOH . F 3 HOH B 26 526 526 HOH HOH . F 3 HOH B 27 527 527 HOH HOH . F 3 HOH B 28 528 528 HOH HOH . F 3 HOH B 29 529 529 HOH HOH . F 3 HOH B 30 530 530 HOH HOH . F 3 HOH B 31 531 531 HOH HOH . F 3 HOH B 32 532 532 HOH HOH . F 3 HOH B 33 533 533 HOH HOH . F 3 HOH B 34 534 534 HOH HOH . F 3 HOH B 35 535 535 HOH HOH . F 3 HOH B 36 536 536 HOH HOH . F 3 HOH B 37 537 537 HOH HOH . F 3 HOH B 38 538 538 HOH HOH . F 3 HOH B 39 539 539 HOH HOH . F 3 HOH B 40 540 540 HOH HOH . F 3 HOH B 41 541 541 HOH HOH . F 3 HOH B 42 542 542 HOH HOH . F 3 HOH B 43 543 543 HOH HOH . F 3 HOH B 44 544 544 HOH HOH . F 3 HOH B 45 545 545 HOH HOH . F 3 HOH B 46 546 546 HOH HOH . F 3 HOH B 47 547 547 HOH HOH . F 3 HOH B 48 548 548 HOH HOH . F 3 HOH B 49 549 549 HOH HOH . F 3 HOH B 50 550 550 HOH HOH . F 3 HOH B 51 551 551 HOH HOH . F 3 HOH B 52 552 552 HOH HOH . F 3 HOH B 53 553 553 HOH HOH . F 3 HOH B 54 554 554 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 33.029 -14.768 -60.565 1 44.74 ? PA FAD 401 A 1 HETATM 2 O O1A FAD . . . C 2 31.752 -15.178 -61.196 1 41.75 ? O1A FAD 401 A 1 HETATM 3 O O2A FAD . . . C 2 33.866 -15.942 -60.065 1 38.41 ? O2A FAD 401 A 1 HETATM 4 O O5B FAD . . . C 2 33.885 -13.861 -61.574 1 44.32 ? O5B FAD 401 A 1 HETATM 5 C C5B FAD . . . C 2 35.181 -13.419 -61.135 1 46.23 ? C5B FAD 401 A 1 HETATM 6 C C4B FAD . . . C 2 35.941 -13.066 -62.385 1 49.6 ? C4B FAD 401 A 1 HETATM 7 O O4B FAD . . . C 2 37.19 -12.436 -62.03 1 50.33 ? O4B FAD 401 A 1 HETATM 8 C C3B FAD . . . C 2 36.284 -14.255 -63.293 1 49.31 ? C3B FAD 401 A 1 HETATM 9 O O3B FAD . . . C 2 35.914 -13.985 -64.64 1 50.38 ? O3B FAD 401 A 1 HETATM 10 C C2B FAD . . . C 2 37.8 -14.397 -63.136 1 49.75 ? C2B FAD 401 A 1 HETATM 11 O O2B FAD . . . C 2 38.399 -14.878 -64.333 1 52.17 ? O2B FAD 401 A 1 HETATM 12 C C1B FAD . . . C 2 38.202 -12.952 -62.864 1 50.39 ? C1B FAD 401 A 1 HETATM 13 N N9A FAD . . . C 2 39.485 -12.785 -62.192 1 46.84 ? N9A FAD 401 A 1 HETATM 14 C C8A FAD . . . C 2 39.953 -13.474 -61.104 1 46.17 ? C8A FAD 401 A 1 HETATM 15 N N7A FAD . . . C 2 41.15 -13.106 -60.712 1 43.4 ? N7A FAD 401 A 1 HETATM 16 C C5A FAD . . . C 2 41.494 -12.104 -61.605 1 45.1 ? C5A FAD 401 A 1 HETATM 17 C C6A FAD . . . C 2 42.643 -11.301 -61.734 1 47.76 ? C6A FAD 401 A 1 HETATM 18 N N6A FAD . . . C 2 43.704 -11.386 -60.925 1 49.47 ? N6A FAD 401 A 1 HETATM 19 N N1A FAD . . . C 2 42.666 -10.396 -62.735 1 47.9 ? N1A FAD 401 A 1 HETATM 20 C C2A FAD . . . C 2 41.608 -10.306 -63.547 1 50.82 ? C2A FAD 401 A 1 HETATM 21 N N3A FAD . . . C 2 40.471 -11.007 -63.523 1 51.03 ? N3A FAD 401 A 1 HETATM 22 C C4A FAD . . . C 2 40.477 -11.895 -62.523 1 46.57 ? C4A FAD 401 A 1 HETATM 23 N N1 FAD . . . C 2 24.974 -18.24 -56.505 1 42.66 ? N1 FAD 401 A 1 HETATM 24 C C2 FAD . . . C 2 23.645 -18.008 -56.703 1 44.44 ? C2 FAD 401 A 1 HETATM 25 O O2 FAD . . . C 2 23.151 -16.888 -56.529 1 49.27 ? O2 FAD 401 A 1 HETATM 26 N N3 FAD . . . C 2 22.814 -19.041 -57.102 1 44.42 ? N3 FAD 401 A 1 HETATM 27 C C4 FAD . . . C 2 23.199 -20.348 -57.329 1 41.89 ? C4 FAD 401 A 1 HETATM 28 O O4 FAD . . . C 2 22.364 -21.174 -57.687 1 42.32 ? O4 FAD 401 A 1 HETATM 29 C C4X FAD . . . C 2 24.619 -20.586 -57.108 1 43.96 ? C4X FAD 401 A 1 HETATM 30 N N5 FAD . . . C 2 25.08 -21.796 -57.282 1 43.33 ? N5 FAD 401 A 1 HETATM 31 C C5X FAD . . . C 2 26.436 -22.01 -57.052 1 43.04 ? C5X FAD 401 A 1 HETATM 32 C C6 FAD . . . C 2 26.954 -23.297 -57.214 1 41.77 ? C6 FAD 401 A 1 HETATM 33 C C7 FAD . . . C 2 28.298 -23.568 -56.983 1 42.68 ? C7 FAD 401 A 1 HETATM 34 C C7M FAD . . . C 2 28.815 -24.971 -57.17 1 46.55 ? C7M FAD 401 A 1 HETATM 35 C C8 FAD . . . C 2 29.154 -22.525 -56.58 1 44.11 ? C8 FAD 401 A 1 HETATM 36 C C8M FAD . . . C 2 30.615 -22.774 -56.31 1 41.48 ? C8M FAD 401 A 1 HETATM 37 C C9 FAD . . . C 2 28.642 -21.242 -56.423 1 40.39 ? C9 FAD 401 A 1 HETATM 38 C C9A FAD . . . C 2 27.297 -20.975 -56.653 1 42.31 ? C9A FAD 401 A 1 HETATM 39 N N10 FAD . . . C 2 26.754 -19.689 -56.489 1 42.36 ? N10 FAD 401 A 1 HETATM 40 C C10 FAD . . . C 2 25.426 -19.468 -56.7 1 43.12 ? C10 FAD 401 A 1 HETATM 41 C C1' FAD . . . C 2 27.609 -18.554 -56.12 1 43.51 ? C1' FAD 401 A 1 HETATM 42 C C2' FAD . . . C 2 28.072 -17.833 -57.38 1 43.77 ? C2' FAD 401 A 1 HETATM 43 O O2' FAD . . . C 2 28.621 -18.775 -58.302 1 40.93 ? O2' FAD 401 A 1 HETATM 44 C C3' FAD . . . C 2 29.113 -16.752 -57.087 1 44.38 ? C3' FAD 401 A 1 HETATM 45 O O3' FAD . . . C 2 28.826 -16.136 -55.837 1 41.47 ? O3' FAD 401 A 1 HETATM 46 C C4' FAD . . . C 2 29.157 -15.681 -58.177 1 46.02 ? C4' FAD 401 A 1 HETATM 47 O O4' FAD . . . C 2 29.568 -16.266 -59.414 1 48.29 ? O4' FAD 401 A 1 HETATM 48 C C5' FAD . . . C 2 30.067 -14.527 -57.828 1 44.98 ? C5' FAD 401 A 1 HETATM 49 O O5' FAD . . . C 2 30.166 -13.703 -59.006 1 41.12 ? O5' FAD 401 A 1 HETATM 50 P P FAD . . . C 2 31.511 -12.845 -59.118 1 40.73 ? P FAD 401 A 1 HETATM 51 O O1P FAD . . . C 2 31.473 -11.92 -60.275 1 41.75 ? O1P FAD 401 A 1 HETATM 52 O O2P FAD . . . C 2 31.767 -12.123 -57.786 1 42.79 ? O2P FAD 401 A 1 HETATM 53 O O3P FAD . . . C 2 32.712 -13.872 -59.29 1 46.16 ? O3P FAD 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 53 #