data_5X6I # _model_server_result.job_id mLj8hjDf5bhThRc5TmUmsw _model_server_result.datetime_utc '2024-11-15 04:17:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x6i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5X6I # _exptl.entry_id 5X6I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5X6I _cell.length_a 43.739 _cell.length_b 44.18 _cell.length_c 100.595 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X6I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 41 A GLU 41 1_555 E CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc2 A OD1 ASP 116 A ASP 116 1_555 F CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc3 A OD2 ASP 118 A ASP 118 1_555 F CA CA . A CA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc4 A SG CYS 130 A CYS 130 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc5 A SG CYS 133 A CYS 133 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc6 A SG CYS 150 A CYS 150 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc7 A OD2 ASP 153 A ASP 153 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc8 A OE1 GLU 188 A GLU 188 1_555 F CA CA . A CA 305 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc9 A OE2 GLU 188 A GLU 188 1_555 F CA CA . A CA 305 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc10 A OE1 GLN 199 A GLN 199 1_555 E CA CA . A CA 304 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc11 C MG MG . A MG 302 1_555 D O2B AP5 . A AP5 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc12 C MG MG . A MG 302 1_555 D O2G AP5 . A AP5 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc13 C MG MG . A MG 302 1_555 G O HOH . A HOH 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc14 C MG MG . A MG 302 1_555 G O HOH . A HOH 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc15 C MG MG . A MG 302 1_555 G O HOH . A HOH 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc16 C MG MG . A MG 302 1_555 G O HOH . A HOH 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc17 E CA CA . A CA 304 1_555 G O HOH . A HOH 404 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc18 E CA CA . A CA 304 1_555 G O HOH . A HOH 428 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc19 E CA CA . A CA 304 1_555 G O HOH . A HOH 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5X6I _atom_sites.fract_transf_matrix[1][1] 0.022863 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009941 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 218 ZN ZN . C 3 MG A 1 302 219 MG MG . D 4 AP5 A 1 303 220 AP5 AP5 . E 5 CA A 1 304 2 CA CA . F 5 CA A 1 305 1 CA CA . G 6 HOH A 1 401 137 HOH HOH . G 6 HOH A 2 402 126 HOH HOH . G 6 HOH A 3 403 140 HOH HOH . G 6 HOH A 4 404 146 HOH HOH . G 6 HOH A 5 405 47 HOH HOH . G 6 HOH A 6 406 28 HOH HOH . G 6 HOH A 7 407 27 HOH HOH . G 6 HOH A 8 408 61 HOH HOH . G 6 HOH A 9 409 33 HOH HOH . G 6 HOH A 10 410 52 HOH HOH . G 6 HOH A 11 411 98 HOH HOH . G 6 HOH A 12 412 4 HOH HOH . G 6 HOH A 13 413 6 HOH HOH . G 6 HOH A 14 414 58 HOH HOH . G 6 HOH A 15 415 32 HOH HOH . G 6 HOH A 16 416 132 HOH HOH . G 6 HOH A 17 417 74 HOH HOH . G 6 HOH A 18 418 7 HOH HOH . G 6 HOH A 19 419 54 HOH HOH . G 6 HOH A 20 420 89 HOH HOH . G 6 HOH A 21 421 1 HOH HOH . G 6 HOH A 22 422 56 HOH HOH . G 6 HOH A 23 423 86 HOH HOH . G 6 HOH A 24 424 59 HOH HOH . G 6 HOH A 25 425 41 HOH HOH . G 6 HOH A 26 426 72 HOH HOH . G 6 HOH A 27 427 17 HOH HOH . G 6 HOH A 28 428 148 HOH HOH . G 6 HOH A 29 429 144 HOH HOH . G 6 HOH A 30 430 49 HOH HOH . G 6 HOH A 31 431 57 HOH HOH . G 6 HOH A 32 432 5 HOH HOH . G 6 HOH A 33 433 94 HOH HOH . G 6 HOH A 34 434 82 HOH HOH . G 6 HOH A 35 435 36 HOH HOH . G 6 HOH A 36 436 51 HOH HOH . G 6 HOH A 37 437 143 HOH HOH . G 6 HOH A 38 438 70 HOH HOH . G 6 HOH A 39 439 10 HOH HOH . G 6 HOH A 40 440 44 HOH HOH . G 6 HOH A 41 441 38 HOH HOH . G 6 HOH A 42 442 14 HOH HOH . G 6 HOH A 43 443 18 HOH HOH . G 6 HOH A 44 444 128 HOH HOH . G 6 HOH A 45 445 69 HOH HOH . G 6 HOH A 46 446 3 HOH HOH . G 6 HOH A 47 447 79 HOH HOH . G 6 HOH A 48 448 15 HOH HOH . G 6 HOH A 49 449 111 HOH HOH . G 6 HOH A 50 450 71 HOH HOH . G 6 HOH A 51 451 26 HOH HOH . G 6 HOH A 52 452 67 HOH HOH . G 6 HOH A 53 453 11 HOH HOH . G 6 HOH A 54 454 75 HOH HOH . G 6 HOH A 55 455 34 HOH HOH . G 6 HOH A 56 456 147 HOH HOH . G 6 HOH A 57 457 22 HOH HOH . G 6 HOH A 58 458 50 HOH HOH . G 6 HOH A 59 459 35 HOH HOH . G 6 HOH A 60 460 37 HOH HOH . G 6 HOH A 61 461 45 HOH HOH . G 6 HOH A 62 462 109 HOH HOH . G 6 HOH A 63 463 20 HOH HOH . G 6 HOH A 64 464 119 HOH HOH . G 6 HOH A 65 465 139 HOH HOH . G 6 HOH A 66 466 112 HOH HOH . G 6 HOH A 67 467 60 HOH HOH . G 6 HOH A 68 468 113 HOH HOH . G 6 HOH A 69 469 16 HOH HOH . G 6 HOH A 70 470 12 HOH HOH . G 6 HOH A 71 471 48 HOH HOH . G 6 HOH A 72 472 30 HOH HOH . G 6 HOH A 73 473 127 HOH HOH . G 6 HOH A 74 474 142 HOH HOH . G 6 HOH A 75 475 21 HOH HOH . G 6 HOH A 76 476 87 HOH HOH . G 6 HOH A 77 477 78 HOH HOH . G 6 HOH A 78 478 25 HOH HOH . G 6 HOH A 79 479 83 HOH HOH . G 6 HOH A 80 480 90 HOH HOH . G 6 HOH A 81 481 42 HOH HOH . G 6 HOH A 82 482 8 HOH HOH . G 6 HOH A 83 483 55 HOH HOH . G 6 HOH A 84 484 108 HOH HOH . G 6 HOH A 85 485 53 HOH HOH . G 6 HOH A 86 486 110 HOH HOH . G 6 HOH A 87 487 104 HOH HOH . G 6 HOH A 88 488 77 HOH HOH . G 6 HOH A 89 489 116 HOH HOH . G 6 HOH A 90 490 96 HOH HOH . G 6 HOH A 91 491 84 HOH HOH . G 6 HOH A 92 492 100 HOH HOH . G 6 HOH A 93 493 99 HOH HOH . G 6 HOH A 94 494 125 HOH HOH . G 6 HOH A 95 495 40 HOH HOH . G 6 HOH A 96 496 115 HOH HOH . G 6 HOH A 97 497 101 HOH HOH . G 6 HOH A 98 498 65 HOH HOH . G 6 HOH A 99 499 19 HOH HOH . G 6 HOH A 100 500 123 HOH HOH . G 6 HOH A 101 501 76 HOH HOH . G 6 HOH A 102 502 66 HOH HOH . G 6 HOH A 103 503 124 HOH HOH . G 6 HOH A 104 504 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 12.545 _atom_site.Cartn_y 0.757 _atom_site.Cartn_z -17.403 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #