data_5X71
#
_model_server_result.job_id            z0pN50CTcPDeg963TDzLrg 
_model_server_result.datetime_utc      '2024-11-09 23:16:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5x71 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":901}' 
#
_entry.id    5X71 
#
_exptl.entry_id    5X71 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              363.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5X71 
_cell.length_a            76.814 
_cell.length_b            122.631 
_cell.length_c            192.262 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5X71 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H14 N5 O8 P' 
_chem_comp.formula_weight    363.221 
_chem_comp.id                5GP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "GUANOSINE-5'-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P 5GP doub 1 n n 
P O2P 5GP sing 2 n n 
P O3P 5GP sing 3 n n 
P O5' 5GP sing 4 n n 
O2P HOP2 5GP sing 5 n n 
O3P HOP3 5GP sing 6 n n 
O5' C5' 5GP sing 7 n n 
C5' C4' 5GP sing 8 n n 
C5' "H5'1" 5GP sing 9 n n 
C5' "H5'2" 5GP sing 10 n n 
C4' O4' 5GP sing 11 n n 
C4' C3' 5GP sing 12 n n 
C4' H4' 5GP sing 13 n n 
O4' C1' 5GP sing 14 n n 
C3' O3' 5GP sing 15 n n 
C3' C2' 5GP sing 16 n n 
C3' H3' 5GP sing 17 n n 
O3' HO3' 5GP sing 18 n n 
C2' O2' 5GP sing 19 n n 
C2' C1' 5GP sing 20 n n 
C2' H2' 5GP sing 21 n n 
O2' HO2' 5GP sing 22 n n 
C1' N9 5GP sing 23 n n 
C1' H1' 5GP sing 24 n n 
N9 C8 5GP sing 25 n y 
N9 C4 5GP sing 26 n y 
C8 N7 5GP doub 27 n y 
C8 H8 5GP sing 28 n n 
N7 C5 5GP sing 29 n y 
C5 C6 5GP sing 30 n n 
C5 C4 5GP doub 31 n y 
C6 O6 5GP doub 32 n n 
C6 N1 5GP sing 33 n n 
N1 C2 5GP sing 34 n n 
N1 HN1 5GP sing 35 n n 
C2 N2 5GP sing 36 n n 
C2 N3 5GP doub 37 n n 
N2 HN21 5GP sing 38 n n 
N2 HN22 5GP sing 39 n n 
N3 C4 5GP sing 40 n n 
#
_atom_sites.entry_id                     5X71 
_atom_sites.fract_transf_matrix[1][1]    0.013018 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008155 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005201 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 5GP A 1 901 2 5GP 5GP . 
D 2 5GP B 1 901 1 5GP 5GP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P 5GP . . . D 2 25.152 51.475 28.167 1 63.75 ? P 5GP 901 B 1 
HETATM 2 O O1P 5GP . . . D 2 24.962 52.518 27.089 1 32.55 ? O1P 5GP 901 B 1 
HETATM 3 O O2P 5GP . . . D 2 26.132 50.372 27.854 1 64.47 ? O2P 5GP 901 B 1 
HETATM 4 O O3P 5GP . . . D 2 23.891 51.009 28.85 1 61.65 ? O3P 5GP 901 B 1 
HETATM 5 O O5' 5GP . . . D 2 25.884 52.254 29.337 1 75.95 ? O5' 5GP 901 B 1 
HETATM 6 C C5' 5GP . . . D 2 25.728 51.833 30.681 1 66.02 ? C5' 5GP 901 B 1 
HETATM 7 C C4' 5GP . . . D 2 25.672 53.011 31.614 1 68.25 ? C4' 5GP 901 B 1 
HETATM 8 O O4' 5GP . . . D 2 25.091 54.149 30.924 1 49.48 ? O4' 5GP 901 B 1 
HETATM 9 C C3' 5GP . . . D 2 24.836 52.801 32.865 1 73.44 ? C3' 5GP 901 B 1 
HETATM 10 O O3' 5GP . . . D 2 25.398 53.57 33.929 1 82.75 ? O3' 5GP 901 B 1 
HETATM 11 C C2' 5GP . . . D 2 23.481 53.381 32.468 1 64.9 ? C2' 5GP 901 B 1 
HETATM 12 O O2' 5GP . . . D 2 22.696 53.812 33.563 1 55.82 ? O2' 5GP 901 B 1 
HETATM 13 C C1' 5GP . . . D 2 23.887 54.543 31.559 1 55.83 ? C1' 5GP 901 B 1 
HETATM 14 N N9 5GP . . . D 2 22.926 54.824 30.491 1 48.76 ? N9 5GP 901 B 1 
HETATM 15 C C8 5GP . . . D 2 23.197 54.724 29.183 1 38.63 ? C8 5GP 901 B 1 
HETATM 16 N N7 5GP . . . D 2 22.104 55.07 28.474 1 43.29 ? N7 5GP 901 B 1 
HETATM 17 C C5 5GP . . . D 2 21.141 55.396 29.354 1 43.79 ? C5 5GP 901 B 1 
HETATM 18 C C6 5GP . . . D 2 19.824 55.82 29.215 1 44.65 ? C6 5GP 901 B 1 
HETATM 19 O O6 5GP . . . D 2 19.324 55.967 28.082 1 39.79 ? O6 5GP 901 B 1 
HETATM 20 N N1 5GP . . . D 2 19.097 56.074 30.31 1 44.52 ? N1 5GP 901 B 1 
HETATM 21 C C2 5GP . . . D 2 19.628 55.918 31.536 1 51.61 ? C2 5GP 901 B 1 
HETATM 22 N N2 5GP . . . D 2 18.888 56.173 32.638 1 50.59 ? N2 5GP 901 B 1 
HETATM 23 N N3 5GP . . . D 2 20.902 55.507 31.699 1 52.51 ? N3 5GP 901 B 1 
HETATM 24 C C4 5GP . . . D 2 21.67 55.249 30.624 1 47.69 ? C4 5GP 901 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           24 
#