data_5X7Y # _model_server_result.job_id O4YPAjxkD41z_ccYtHEa-w _model_server_result.datetime_utc '2024-12-24 17:15:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x7y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 5X7Y # _exptl.entry_id 5X7Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5X7Y _cell.length_a 96.604 _cell.length_b 96.604 _cell.length_c 85.601 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X7Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G,K 3 1 D,H,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 69 A CYS 67 1_555 A SG CYS 162 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf2 B SG CYS 69 B CYS 67 1_555 B SG CYS 162 B CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf3 C SG CYS 69 C CYS 67 1_555 C SG CYS 162 C CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? disulf ? disulf4 D SG CYS 69 D CYS 67 1_555 D SG CYS 162 D CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 5X7Y _atom_sites.fract_transf_matrix[1][1] 0.010352 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010352 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011682 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PEG A 1 201 1 PEG PEG . F 2 PEG B 1 201 3 PEG PEG . G 2 PEG C 1 201 2 PEG PEG . H 2 PEG D 1 201 4 PEG PEG . I 3 HOH A 1 301 41 HOH HOH . I 3 HOH A 2 302 20 HOH HOH . I 3 HOH A 3 303 16 HOH HOH . I 3 HOH A 4 304 48 HOH HOH . I 3 HOH A 5 305 9 HOH HOH . I 3 HOH A 6 306 44 HOH HOH . I 3 HOH A 7 307 19 HOH HOH . I 3 HOH A 8 308 22 HOH HOH . I 3 HOH A 9 309 74 HOH HOH . I 3 HOH A 10 310 73 HOH HOH . I 3 HOH A 11 311 12 HOH HOH . I 3 HOH A 12 312 36 HOH HOH . I 3 HOH A 13 313 65 HOH HOH . I 3 HOH A 14 314 17 HOH HOH . I 3 HOH A 15 315 64 HOH HOH . I 3 HOH A 16 316 56 HOH HOH . I 3 HOH A 17 317 75 HOH HOH . I 3 HOH A 18 318 32 HOH HOH . I 3 HOH A 19 319 14 HOH HOH . I 3 HOH A 20 320 46 HOH HOH . I 3 HOH A 21 321 61 HOH HOH . I 3 HOH A 22 322 37 HOH HOH . I 3 HOH A 23 323 72 HOH HOH . I 3 HOH A 24 324 45 HOH HOH . I 3 HOH A 25 325 58 HOH HOH . I 3 HOH A 26 326 55 HOH HOH . I 3 HOH A 27 327 33 HOH HOH . I 3 HOH A 28 328 63 HOH HOH . I 3 HOH A 29 329 7 HOH HOH . I 3 HOH A 30 330 42 HOH HOH . I 3 HOH A 31 331 51 HOH HOH . I 3 HOH A 32 332 49 HOH HOH . I 3 HOH A 33 333 60 HOH HOH . I 3 HOH A 34 334 8 HOH HOH . I 3 HOH A 35 335 50 HOH HOH . J 3 HOH B 1 301 39 HOH HOH . J 3 HOH B 2 302 23 HOH HOH . J 3 HOH B 3 303 70 HOH HOH . J 3 HOH B 4 304 35 HOH HOH . J 3 HOH B 5 305 18 HOH HOH . J 3 HOH B 6 306 5 HOH HOH . J 3 HOH B 7 307 28 HOH HOH . J 3 HOH B 8 308 38 HOH HOH . J 3 HOH B 9 309 66 HOH HOH . J 3 HOH B 10 310 24 HOH HOH . J 3 HOH B 11 311 10 HOH HOH . J 3 HOH B 12 312 71 HOH HOH . K 3 HOH C 1 301 30 HOH HOH . K 3 HOH C 2 302 76 HOH HOH . K 3 HOH C 3 303 43 HOH HOH . K 3 HOH C 4 304 57 HOH HOH . K 3 HOH C 5 305 54 HOH HOH . K 3 HOH C 6 306 15 HOH HOH . K 3 HOH C 7 307 59 HOH HOH . K 3 HOH C 8 308 6 HOH HOH . K 3 HOH C 9 309 52 HOH HOH . K 3 HOH C 10 310 34 HOH HOH . K 3 HOH C 11 311 62 HOH HOH . K 3 HOH C 12 312 29 HOH HOH . K 3 HOH C 13 313 67 HOH HOH . K 3 HOH C 14 314 47 HOH HOH . K 3 HOH C 15 315 13 HOH HOH . K 3 HOH C 16 316 11 HOH HOH . K 3 HOH C 17 317 21 HOH HOH . K 3 HOH C 18 318 25 HOH HOH . K 3 HOH C 19 319 77 HOH HOH . K 3 HOH C 20 320 26 HOH HOH . K 3 HOH C 21 321 78 HOH HOH . L 3 HOH D 1 301 68 HOH HOH . L 3 HOH D 2 302 79 HOH HOH . L 3 HOH D 3 303 40 HOH HOH . L 3 HOH D 4 304 27 HOH HOH . L 3 HOH D 5 305 69 HOH HOH . L 3 HOH D 6 306 53 HOH HOH . L 3 HOH D 7 307 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 2 -6.064 22.937 2.967 1 49.35 ? C1 PEG 201 A 1 HETATM 2 O O1 PEG . . . E 2 -6.548 22.833 1.62 1 47.91 ? O1 PEG 201 A 1 HETATM 3 C C2 PEG . . . E 2 -5.777 24.377 3.408 1 49.64 ? C2 PEG 201 A 1 HETATM 4 O O2 PEG . . . E 2 -4.367 24.552 3.542 1 45.6 ? O2 PEG 201 A 1 HETATM 5 C C3 PEG . . . E 2 -3.903 25.833 4.011 1 45.69 ? C3 PEG 201 A 1 HETATM 6 C C4 PEG . . . E 2 -3.055 26.515 2.931 1 48 ? C4 PEG 201 A 1 HETATM 7 O O4 PEG . . . E 2 -1.783 25.878 2.614 1 51.83 ? O4 PEG 201 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 370 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 7 #