data_5X8X # _model_server_result.job_id yXxOEDSbztpPR-3qadziMw _model_server_result.datetime_utc '2024-12-28 17:48:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x8x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":9000}' # _entry.id 5X8X # _exptl.entry_id 5X8X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.642 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,4R)-4-[4-cyclopropyl-5-[3-(2-methylpropyl)cyclobutyl]-1,2,4-triazol-3-yl]-N-(2,4-dimethylphenyl)-1-ethanoyl-pyrrolidine-3-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 89.98 _cell.angle_gamma 90 _cell.entry_id 5X8X _cell.length_a 79.3 _cell.length_b 72.6 _cell.length_c 99.32 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X8X _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,M,N 1 1 C,D,J,O,P 2 1 E,F,K,Q 3 1 G,H,L,R,S 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C28 H39 N5 O2' _chem_comp.formula_weight 477.642 _chem_comp.id 82O _chem_comp.mon_nstd_flag . _chem_comp.name (3R,4R)-4-[4-cyclopropyl-5-[3-(2-methylpropyl)cyclobutyl]-1,2,4-triazol-3-yl]-N-(2,4-dimethylphenyl)-1-ethanoyl-pyrrolidine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C26 82O sing 1 n n C26 O27 82O doub 2 n n C26 N24 82O sing 3 n n C25 N24 82O sing 4 n n C25 C21 82O sing 5 n n N24 C23 82O sing 6 n n C21 C9 82O sing 7 n n C21 C22 82O sing 8 n n C23 C22 82O sing 9 n n N10 C9 82O sing 10 n n N10 C13 82O sing 11 n n C9 O11 82O doub 12 n n C22 C3 82O sing 13 n n C13 C14 82O doub 14 n y C13 C18 82O sing 15 n y N2 C3 82O doub 16 n y N2 N4 82O sing 17 n y C14 C15 82O sing 18 n y C19 C18 82O sing 19 n n C18 C17 82O doub 20 n y C3 N1 82O sing 21 n y C15 C16 82O doub 22 n y N4 C5 82O doub 23 n y C17 C16 82O sing 24 n y C16 C20 82O sing 25 n n N1 C5 82O sing 26 n y N1 C6 82O sing 27 n n C5 C12 82O sing 28 n n C6 C7 82O sing 29 n n C6 C8 82O sing 30 n n C29 C12 82O sing 31 n n C29 C30 82O sing 32 n n C7 C8 82O sing 33 n n C12 C31 82O sing 34 n n C32 C30 82O sing 35 n n C32 C33 82O sing 36 n n C31 C30 82O sing 37 n n C34 C33 82O sing 38 n n C33 C35 82O sing 39 n n C6 H1 82O sing 40 n n C7 H2 82O sing 41 n n C7 H3 82O sing 42 n n C8 H4 82O sing 43 n n C8 H5 82O sing 44 n n C12 H6 82O sing 45 n n C14 H7 82O sing 46 n n C15 H8 82O sing 47 n n C28 H9 82O sing 48 n n C28 H10 82O sing 49 n n C28 H11 82O sing 50 n n C25 H12 82O sing 51 n n C25 H13 82O sing 52 n n C21 H14 82O sing 53 n n N10 H15 82O sing 54 n n C19 H16 82O sing 55 n n C19 H17 82O sing 56 n n C19 H18 82O sing 57 n n C17 H19 82O sing 58 n n C20 H20 82O sing 59 n n C20 H21 82O sing 60 n n C20 H22 82O sing 61 n n C23 H23 82O sing 62 n n C23 H24 82O sing 63 n n C22 H25 82O sing 64 n n C31 H26 82O sing 65 n n C31 H27 82O sing 66 n n C30 H28 82O sing 67 n n C29 H29 82O sing 68 n n C29 H30 82O sing 69 n n C32 H31 82O sing 70 n n C32 H32 82O sing 71 n n C33 H33 82O sing 72 n n C35 H34 82O sing 73 n n C35 H35 82O sing 74 n n C35 H36 82O sing 75 n n C34 H37 82O sing 76 n n C34 H38 82O sing 77 n n C34 H39 82O sing 78 n n # _atom_sites.entry_id 5X8X _atom_sites.fract_transf_matrix[1][1] 0.01261 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] -0.000006 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013774 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 82O A 1 9000 9000 82O MOL . J 3 82O C 1 9000 9000 82O MOL . K 3 82O E 1 9000 9000 82O MOL . L 3 82O G 1 9000 9000 82O MOL . M 4 HOH A 1 9101 2 HOH HOH . M 4 HOH A 2 9102 49 HOH HOH . M 4 HOH A 3 9103 10 HOH HOH . M 4 HOH A 4 9104 25 HOH HOH . M 4 HOH A 5 9105 43 HOH HOH . M 4 HOH A 6 9106 9 HOH HOH . M 4 HOH A 7 9107 28 HOH HOH . M 4 HOH A 8 9108 36 HOH HOH . M 4 HOH A 9 9109 31 HOH HOH . M 4 HOH A 10 9110 44 HOH HOH . M 4 HOH A 11 9111 20 HOH HOH . M 4 HOH A 12 9112 12 HOH HOH . M 4 HOH A 13 9113 46 HOH HOH . M 4 HOH A 14 9114 14 HOH HOH . M 4 HOH A 15 9115 24 HOH HOH . M 4 HOH A 16 9116 67 HOH HOH . M 4 HOH A 17 9117 22 HOH HOH . M 4 HOH A 18 9118 60 HOH HOH . M 4 HOH A 19 9119 47 HOH HOH . M 4 HOH A 20 9120 35 HOH HOH . N 4 HOH B 1 2401 8 HOH HOH . O 4 HOH C 1 9101 63 HOH HOH . O 4 HOH C 2 9102 48 HOH HOH . O 4 HOH C 3 9103 40 HOH HOH . O 4 HOH C 4 9104 53 HOH HOH . O 4 HOH C 5 9105 1 HOH HOH . O 4 HOH C 6 9106 50 HOH HOH . O 4 HOH C 7 9107 27 HOH HOH . O 4 HOH C 8 9108 68 HOH HOH . O 4 HOH C 9 9109 6 HOH HOH . O 4 HOH C 10 9110 13 HOH HOH . O 4 HOH C 11 9111 15 HOH HOH . O 4 HOH C 12 9112 41 HOH HOH . P 4 HOH D 1 2401 30 HOH HOH . Q 4 HOH E 1 9101 34 HOH HOH . Q 4 HOH E 2 9102 59 HOH HOH . Q 4 HOH E 3 9103 39 HOH HOH . Q 4 HOH E 4 9104 64 HOH HOH . Q 4 HOH E 5 9105 5 HOH HOH . Q 4 HOH E 6 9106 56 HOH HOH . Q 4 HOH E 7 9107 66 HOH HOH . Q 4 HOH E 8 9108 4 HOH HOH . Q 4 HOH E 9 9109 51 HOH HOH . Q 4 HOH E 10 9110 26 HOH HOH . Q 4 HOH E 11 9111 3 HOH HOH . Q 4 HOH E 12 9112 52 HOH HOH . Q 4 HOH E 13 9113 57 HOH HOH . Q 4 HOH E 14 9114 18 HOH HOH . Q 4 HOH E 15 9115 19 HOH HOH . Q 4 HOH E 16 9116 29 HOH HOH . Q 4 HOH E 17 9117 45 HOH HOH . Q 4 HOH E 18 9118 21 HOH HOH . Q 4 HOH E 19 9119 55 HOH HOH . Q 4 HOH E 20 9120 16 HOH HOH . R 4 HOH G 1 9101 37 HOH HOH . R 4 HOH G 2 9102 32 HOH HOH . R 4 HOH G 3 9103 42 HOH HOH . R 4 HOH G 4 9104 54 HOH HOH . R 4 HOH G 5 9105 17 HOH HOH . R 4 HOH G 6 9106 38 HOH HOH . R 4 HOH G 7 9107 23 HOH HOH . R 4 HOH G 8 9108 62 HOH HOH . R 4 HOH G 9 9109 7 HOH HOH . R 4 HOH G 10 9110 69 HOH HOH . R 4 HOH G 11 9111 70 HOH HOH . R 4 HOH G 12 9112 65 HOH HOH . R 4 HOH G 13 9113 61 HOH HOH . R 4 HOH G 14 9114 58 HOH HOH . R 4 HOH G 15 9115 33 HOH HOH . S 4 HOH H 1 2401 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 82O . . . L 3 27.269 -7.735 -4.307 1 54.11 ? C3 82O 9000 G 1 HETATM 2 C C5 82O . . . L 3 26.05 -6.305 -3.158 1 54.34 ? C5 82O 9000 G 1 HETATM 3 C C6 82O . . . L 3 28.348 -6.842 -2.192 1 50.24 ? C6 82O 9000 G 1 HETATM 4 N N1 82O . . . L 3 27.264 -6.943 -3.149 1 58.72 ? N1 82O 9000 G 1 HETATM 5 N N2 82O . . . L 3 26.102 -7.612 -4.95 1 44.9 ? N2 82O 9000 G 1 HETATM 6 C C7 82O . . . L 3 28.899 -8.092 -1.577 1 49.41 ? C7 82O 9000 G 1 HETATM 7 C C8 82O . . . L 3 28.234 -7.089 -0.717 1 56.02 ? C8 82O 9000 G 1 HETATM 8 C C9 82O . . . L 3 29.931 -6.806 -5.577 1 37.05 ? C9 82O 9000 G 1 HETATM 9 C C12 82O . . . L 3 25.503 -5.296 -2.173 1 51.99 ? C12 82O 9000 G 1 HETATM 10 C C13 82O . . . L 3 29.735 -4.322 -5.781 1 26.7 ? C13 82O 9000 G 1 HETATM 11 C C14 82O . . . L 3 31.031 -3.93 -5.507 1 24.42 ? C14 82O 9000 G 1 HETATM 12 C C15 82O . . . L 3 31.336 -2.54 -5.368 1 26.02 ? C15 82O 9000 G 1 HETATM 13 O O27 82O . . . L 3 28.768 -12.602 -5.982 1 71.22 ? O27 82O 9000 G 1 HETATM 14 C C26 82O . . . L 3 29.612 -11.685 -6.102 1 62.92 ? C26 82O 9000 G 1 HETATM 15 C C28 82O . . . L 3 31.056 -11.917 -6.434 1 63.94 ? C28 82O 9000 G 1 HETATM 16 N N24 82O . . . L 3 29.276 -10.379 -5.911 1 49.5 ? N24 82O 9000 G 1 HETATM 17 C C25 82O . . . L 3 30.105 -9.228 -6.22 1 40.45 ? C25 82O 9000 G 1 HETATM 18 C C21 82O . . . L 3 29.157 -8.061 -5.958 1 37.94 ? C21 82O 9000 G 1 HETATM 19 O O11 82O . . . L 3 30.95 -6.873 -4.909 1 47.62 ? O11 82O 9000 G 1 HETATM 20 N N10 82O . . . L 3 29.355 -5.651 -6.002 1 31.15 ? N10 82O 9000 G 1 HETATM 21 C C18 82O . . . L 3 28.725 -3.35 -5.858 1 27.43 ? C18 82O 9000 G 1 HETATM 22 C C19 82O . . . L 3 27.285 -3.706 -6.091 1 34.46 ? C19 82O 9000 G 1 HETATM 23 C C17 82O . . . L 3 28.984 -1.993 -5.623 1 27.97 ? C17 82O 9000 G 1 HETATM 24 C C16 82O . . . L 3 30.309 -1.585 -5.384 1 30.08 ? C16 82O 9000 G 1 HETATM 25 C C20 82O . . . L 3 30.537 -0.118 -5.191 1 28.02 ? C20 82O 9000 G 1 HETATM 26 C C23 82O . . . L 3 28.035 -9.987 -5.321 1 48.7 ? C23 82O 9000 G 1 HETATM 27 C C22 82O . . . L 3 28.375 -8.613 -4.802 1 43.15 ? C22 82O 9000 G 1 HETATM 28 N N4 82O . . . L 3 25.385 -6.695 -4.241 1 53.79 ? N4 82O 9000 G 1 HETATM 29 C C31 82O . . . L 3 24.537 -4.212 -2.764 1 46.11 ? C31 82O 9000 G 1 HETATM 30 C C30 82O . . . L 3 25.395 -3.126 -2.053 1 46.48 ? C30 82O 9000 G 1 HETATM 31 C C29 82O . . . L 3 26.556 -4.142 -1.994 1 42.72 ? C29 82O 9000 G 1 HETATM 32 C C32 82O . . . L 3 25.776 -1.941 -2.901 1 43.05 ? C32 82O 9000 G 1 HETATM 33 C C33 82O . . . L 3 25.056 -0.685 -2.46 1 43.17 ? C33 82O 9000 G 1 HETATM 34 C C35 82O . . . L 3 25.645 0.486 -3.27 1 39.06 ? C35 82O 9000 G 1 HETATM 35 C C34 82O . . . L 3 25.199 -0.45 -0.967 1 41.14 ? C34 82O 9000 G 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 35 #