data_5X9D # _model_server_result.job_id uOlCZ3jO6clAdnPCSibqjw _model_server_result.datetime_utc '2024-12-22 01:38:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5x9d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5X9D # _exptl.entry_id 5X9D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'L(+)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5X9D _cell.length_a 106.171 _cell.length_b 106.171 _cell.length_c 56.874 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5X9D _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 303 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 303 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 303 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 303 _struct_conn.ptnr2_symmetry 6_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.039 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TLA _chem_comp.mon_nstd_flag . _chem_comp.name 'L(+)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TLA doub 395 n n O11 C1 TLA sing 396 n n O11 H11 TLA sing 397 n n C1 C2 TLA sing 398 n n C2 O2 TLA sing 399 n n C2 C3 TLA sing 400 n n C2 H2 TLA sing 401 n n O2 HA TLA sing 402 n n C3 O3 TLA sing 403 n n C3 C4 TLA sing 404 n n C3 H3 TLA sing 405 n n O3 HB TLA sing 406 n n C4 O4 TLA doub 407 n n C4 O41 TLA sing 408 n n O41 H41 TLA sing 409 n n # _atom_sites.entry_id 5X9D _atom_sites.fract_transf_matrix[1][1] 0.009419 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009419 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017583 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 80F A 1 501 501 80F NAC . C 3 TLA A 1 502 503 TLA TLA . D 4 HOH A 1 601 77 HOH HOH . D 4 HOH A 2 602 16 HOH HOH . D 4 HOH A 3 603 120 HOH HOH . D 4 HOH A 4 604 13 HOH HOH . D 4 HOH A 5 605 17 HOH HOH . D 4 HOH A 6 606 14 HOH HOH . D 4 HOH A 7 607 70 HOH HOH . D 4 HOH A 8 608 72 HOH HOH . D 4 HOH A 9 609 26 HOH HOH . D 4 HOH A 10 610 10 HOH HOH . D 4 HOH A 11 611 24 HOH HOH . D 4 HOH A 12 612 34 HOH HOH . D 4 HOH A 13 613 78 HOH HOH . D 4 HOH A 14 614 96 HOH HOH . D 4 HOH A 15 615 25 HOH HOH . D 4 HOH A 16 616 63 HOH HOH . D 4 HOH A 17 617 59 HOH HOH . D 4 HOH A 18 618 92 HOH HOH . D 4 HOH A 19 619 28 HOH HOH . D 4 HOH A 20 620 65 HOH HOH . D 4 HOH A 21 621 54 HOH HOH . D 4 HOH A 22 622 12 HOH HOH . D 4 HOH A 23 623 42 HOH HOH . D 4 HOH A 24 624 21 HOH HOH . D 4 HOH A 25 625 1 HOH HOH . D 4 HOH A 26 626 94 HOH HOH . D 4 HOH A 27 627 37 HOH HOH . D 4 HOH A 28 628 3 HOH HOH . D 4 HOH A 29 629 53 HOH HOH . D 4 HOH A 30 630 89 HOH HOH . D 4 HOH A 31 631 64 HOH HOH . D 4 HOH A 32 632 126 HOH HOH . D 4 HOH A 33 633 58 HOH HOH . D 4 HOH A 34 634 82 HOH HOH . D 4 HOH A 35 635 116 HOH HOH . D 4 HOH A 36 636 108 HOH HOH . D 4 HOH A 37 637 11 HOH HOH . D 4 HOH A 38 638 123 HOH HOH . D 4 HOH A 39 639 83 HOH HOH . D 4 HOH A 40 640 101 HOH HOH . D 4 HOH A 41 641 61 HOH HOH . D 4 HOH A 42 642 115 HOH HOH . D 4 HOH A 43 643 6 HOH HOH . D 4 HOH A 44 644 49 HOH HOH . D 4 HOH A 45 645 39 HOH HOH . D 4 HOH A 46 646 2 HOH HOH . D 4 HOH A 47 647 5 HOH HOH . D 4 HOH A 48 648 56 HOH HOH . D 4 HOH A 49 649 75 HOH HOH . D 4 HOH A 50 650 47 HOH HOH . D 4 HOH A 51 651 69 HOH HOH . D 4 HOH A 52 652 29 HOH HOH . D 4 HOH A 53 653 35 HOH HOH . D 4 HOH A 54 654 20 HOH HOH . D 4 HOH A 55 655 48 HOH HOH . D 4 HOH A 56 656 84 HOH HOH . D 4 HOH A 57 657 50 HOH HOH . D 4 HOH A 58 658 51 HOH HOH . D 4 HOH A 59 659 97 HOH HOH . D 4 HOH A 60 660 90 HOH HOH . D 4 HOH A 61 661 57 HOH HOH . D 4 HOH A 62 662 36 HOH HOH . D 4 HOH A 63 663 93 HOH HOH . D 4 HOH A 64 664 18 HOH HOH . D 4 HOH A 65 665 60 HOH HOH . D 4 HOH A 66 666 55 HOH HOH . D 4 HOH A 67 667 71 HOH HOH . D 4 HOH A 68 668 15 HOH HOH . D 4 HOH A 69 669 19 HOH HOH . D 4 HOH A 70 670 31 HOH HOH . D 4 HOH A 71 671 38 HOH HOH . D 4 HOH A 72 672 32 HOH HOH . D 4 HOH A 73 673 104 HOH HOH . D 4 HOH A 74 674 7 HOH HOH . D 4 HOH A 75 675 106 HOH HOH . D 4 HOH A 76 676 86 HOH HOH . D 4 HOH A 77 677 102 HOH HOH . D 4 HOH A 78 678 27 HOH HOH . D 4 HOH A 79 679 125 HOH HOH . D 4 HOH A 80 680 122 HOH HOH . D 4 HOH A 81 681 9 HOH HOH . D 4 HOH A 82 682 22 HOH HOH . D 4 HOH A 83 683 43 HOH HOH . D 4 HOH A 84 684 124 HOH HOH . D 4 HOH A 85 685 41 HOH HOH . D 4 HOH A 86 686 44 HOH HOH . D 4 HOH A 87 687 88 HOH HOH . D 4 HOH A 88 688 99 HOH HOH . D 4 HOH A 89 689 87 HOH HOH . D 4 HOH A 90 690 52 HOH HOH . D 4 HOH A 91 691 74 HOH HOH . D 4 HOH A 92 692 81 HOH HOH . D 4 HOH A 93 693 98 HOH HOH . D 4 HOH A 94 694 33 HOH HOH . D 4 HOH A 95 695 105 HOH HOH . D 4 HOH A 96 696 76 HOH HOH . D 4 HOH A 97 697 100 HOH HOH . D 4 HOH A 98 698 107 HOH HOH . D 4 HOH A 99 699 67 HOH HOH . D 4 HOH A 100 700 30 HOH HOH . D 4 HOH A 101 701 103 HOH HOH . D 4 HOH A 102 702 62 HOH HOH . D 4 HOH A 103 703 85 HOH HOH . D 4 HOH A 104 704 73 HOH HOH . D 4 HOH A 105 705 117 HOH HOH . D 4 HOH A 106 706 46 HOH HOH . D 4 HOH A 107 707 80 HOH HOH . D 4 HOH A 108 708 45 HOH HOH . D 4 HOH A 109 709 109 HOH HOH . D 4 HOH A 110 710 111 HOH HOH . D 4 HOH A 111 711 23 HOH HOH . D 4 HOH A 112 712 66 HOH HOH . D 4 HOH A 113 713 91 HOH HOH . D 4 HOH A 114 714 121 HOH HOH . D 4 HOH A 115 715 8 HOH HOH . D 4 HOH A 116 716 68 HOH HOH . D 4 HOH A 117 717 79 HOH HOH . D 4 HOH A 118 718 110 HOH HOH . D 4 HOH A 119 719 112 HOH HOH . D 4 HOH A 120 720 114 HOH HOH . D 4 HOH A 121 721 119 HOH HOH . D 4 HOH A 122 722 113 HOH HOH . D 4 HOH A 123 723 118 HOH HOH . D 4 HOH A 124 724 4 HOH HOH . D 4 HOH A 125 725 40 HOH HOH . D 4 HOH A 126 726 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TLA . . . C 3 -16.462 -33.442 -31.44 1 33.72 ? O1 TLA 502 A 1 HETATM 2 O O11 TLA . . . C 3 -17.332 -31.436 -31.375 1 36.82 ? O11 TLA 502 A 1 HETATM 3 C C1 TLA . . . C 3 -16.463 -32.261 -31.033 1 34.91 ? C1 TLA 502 A 1 HETATM 4 C C2 TLA . . . C 3 -15.386 -31.804 -30.09 1 34.99 ? C2 TLA 502 A 1 HETATM 5 O O2 TLA . . . C 3 -15.531 -30.413 -29.786 1 34.62 ? O2 TLA 502 A 1 HETATM 6 C C3 TLA . . . C 3 -13.992 -32.021 -30.674 1 35.19 ? C3 TLA 502 A 1 HETATM 7 O O3 TLA . . . C 3 -13.83 -31.194 -31.839 1 33.3 ? O3 TLA 502 A 1 HETATM 8 C C4 TLA . . . C 3 -12.98 -31.68 -29.611 1 35.36 ? C4 TLA 502 A 1 HETATM 9 O O4 TLA . . . C 3 -12.072 -30.862 -29.875 1 35.29 ? O4 TLA 502 A 1 HETATM 10 O O41 TLA . . . C 3 -13.08 -32.229 -28.49 1 34.91 ? O41 TLA 502 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #