data_5XAA # _model_server_result.job_id wJ-_Le1Cct2nh5K-OjDTzw _model_server_result.datetime_utc '2024-10-12 18:18:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xaa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 5XAA # _exptl.entry_id 5XAA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XAA _cell.length_a 120.9 _cell.length_b 87.7 _cell.length_c 140.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XAA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OD2 ASP 352 A ASP 351 1_555 B MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc2 A O THR 354 A THR 353 1_555 B MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc3 A OD1 ASP 704 A ASP 703 1_555 B MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc4 B MG MG . A MG 1001 1_555 LA O HOH . A HOH 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc5 B MG MG . A MG 1001 1_555 LA O HOH . A HOH 1121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc6 B MG MG . A MG 1001 1_555 LA O HOH . A HOH 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5XAA _atom_sites.fract_transf_matrix[1][1] 0.008271 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011403 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1001 1001 MG MG . C 3 ALF A 1 1002 1002 ALF ALF . D 4 TG1 A 1 1003 1003 TG1 TG1 . E 5 PCW A 1 1004 1004 PCW PCW . F 5 PCW A 1 1005 1005 PCW PCW . G 5 PCW A 1 1006 1006 PCW PCW . H 5 PCW A 1 1007 1007 PCW PCW . I 5 PCW A 1 1008 1008 PCW PCW . J 5 PCW A 1 1009 1009 PCW PCW . K 5 PCW A 1 1010 1010 PCW PCW . L 5 PCW A 1 1011 1011 PCW PCW . M 5 PCW A 1 1012 1012 PCW PCW . N 5 PCW A 1 1013 1013 PCW PCW . O 5 PCW A 1 1014 1014 PCW PCW . P 5 PCW A 1 1015 1015 PCW PCW . Q 5 PCW A 1 1016 1016 PCW PCW . R 5 PCW A 1 1017 1017 PCW PCW . S 5 PCW A 1 1018 1018 PCW PCW . T 5 PCW A 1 1019 1019 PCW PCW . U 5 PCW A 1 1020 1020 PCW PCW . V 5 PCW A 1 1021 1021 PCW PCW . W 5 PCW A 1 1022 1022 PCW PCW . X 5 PCW A 1 1023 1023 PCW PCW . Y 5 PCW A 1 1024 1024 PCW PCW . Z 5 PCW A 1 1025 1025 PCW PCW . AA 5 PCW A 1 1026 1026 PCW PCW . BA 5 PCW A 1 1027 1027 PCW PCW . CA 5 PCW A 1 1028 1028 PCW PCW . DA 5 PCW A 1 1029 1029 PCW PCW . EA 5 PCW A 1 1030 1030 PCW PCW . FA 5 PCW A 1 1031 1031 PCW PCW . GA 5 PCW A 1 1032 1032 PCW PCW . HA 5 PCW A 1 1033 1033 PCW PCW . IA 5 PCW A 1 1034 1034 PCW PCW . JA 5 PCW A 1 1035 1035 PCW PCW . KA 5 PCW A 1 1036 1036 PCW PCW . LA 6 HOH A 1 1101 1101 HOH HOH . LA 6 HOH A 2 1102 1102 HOH HOH . LA 6 HOH A 3 1103 1103 HOH HOH . LA 6 HOH A 4 1104 1104 HOH HOH . LA 6 HOH A 5 1105 1105 HOH HOH . LA 6 HOH A 6 1106 1106 HOH HOH . LA 6 HOH A 7 1107 1107 HOH HOH . LA 6 HOH A 8 1108 1108 HOH HOH . LA 6 HOH A 9 1109 1109 HOH HOH . LA 6 HOH A 10 1110 1110 HOH HOH . LA 6 HOH A 11 1111 1111 HOH HOH . LA 6 HOH A 12 1112 1112 HOH HOH . LA 6 HOH A 13 1113 1113 HOH HOH . LA 6 HOH A 14 1114 1114 HOH HOH . LA 6 HOH A 15 1115 1115 HOH HOH . LA 6 HOH A 16 1116 1116 HOH HOH . LA 6 HOH A 17 1117 1117 HOH HOH . LA 6 HOH A 18 1118 1118 HOH HOH . LA 6 HOH A 19 1119 1119 HOH HOH . LA 6 HOH A 20 1120 1120 HOH HOH . LA 6 HOH A 21 1121 1121 HOH HOH . LA 6 HOH A 22 1122 1122 HOH HOH . LA 6 HOH A 23 1123 1123 HOH HOH . LA 6 HOH A 24 1124 1124 HOH HOH . LA 6 HOH A 25 1125 1125 HOH HOH . LA 6 HOH A 26 1126 1126 HOH HOH . LA 6 HOH A 27 1127 1127 HOH HOH . LA 6 HOH A 28 1128 1128 HOH HOH . LA 6 HOH A 29 1129 1129 HOH HOH . LA 6 HOH A 30 1130 1130 HOH HOH . LA 6 HOH A 31 1131 1131 HOH HOH . LA 6 HOH A 32 1132 1132 HOH HOH . LA 6 HOH A 33 1133 1133 HOH HOH . LA 6 HOH A 34 1134 1134 HOH HOH . LA 6 HOH A 35 1135 1135 HOH HOH . LA 6 HOH A 36 1136 1136 HOH HOH . LA 6 HOH A 37 1137 1137 HOH HOH . LA 6 HOH A 38 1138 1138 HOH HOH . LA 6 HOH A 39 1139 1139 HOH HOH . LA 6 HOH A 40 1140 1140 HOH HOH . LA 6 HOH A 41 1141 1141 HOH HOH . LA 6 HOH A 42 1142 1142 HOH HOH . LA 6 HOH A 43 1143 1143 HOH HOH . LA 6 HOH A 44 1144 1144 HOH HOH . LA 6 HOH A 45 1145 1145 HOH HOH . LA 6 HOH A 46 1146 1146 HOH HOH . LA 6 HOH A 47 1147 1147 HOH HOH . LA 6 HOH A 48 1148 1148 HOH HOH . LA 6 HOH A 49 1149 1149 HOH HOH . LA 6 HOH A 50 1150 1150 HOH HOH . LA 6 HOH A 51 1151 1151 HOH HOH . LA 6 HOH A 52 1152 1152 HOH HOH . LA 6 HOH A 53 1153 1153 HOH HOH . LA 6 HOH A 54 1154 1154 HOH HOH . LA 6 HOH A 55 1155 1155 HOH HOH . LA 6 HOH A 56 1156 1156 HOH HOH . LA 6 HOH A 57 1157 1157 HOH HOH . LA 6 HOH A 58 1158 1158 HOH HOH . LA 6 HOH A 59 1159 1159 HOH HOH . LA 6 HOH A 60 1160 1160 HOH HOH . LA 6 HOH A 61 1161 1161 HOH HOH . LA 6 HOH A 62 1162 1162 HOH HOH . LA 6 HOH A 63 1163 1163 HOH HOH . LA 6 HOH A 64 1164 1164 HOH HOH . LA 6 HOH A 65 1165 1165 HOH HOH . LA 6 HOH A 66 1166 1166 HOH HOH . LA 6 HOH A 67 1167 1167 HOH HOH . LA 6 HOH A 68 1168 1168 HOH HOH . LA 6 HOH A 69 1169 1169 HOH HOH . LA 6 HOH A 70 1170 1170 HOH HOH . LA 6 HOH A 71 1171 1171 HOH HOH . LA 6 HOH A 72 1172 1172 HOH HOH . LA 6 HOH A 73 1173 1173 HOH HOH . LA 6 HOH A 74 1174 1174 HOH HOH . LA 6 HOH A 75 1175 1175 HOH HOH . LA 6 HOH A 76 1176 1176 HOH HOH . LA 6 HOH A 77 1177 1177 HOH HOH . LA 6 HOH A 78 1178 1178 HOH HOH . LA 6 HOH A 79 1179 1179 HOH HOH . LA 6 HOH A 80 1180 1180 HOH HOH . LA 6 HOH A 81 1181 1181 HOH HOH . LA 6 HOH A 82 1182 1182 HOH HOH . LA 6 HOH A 83 1183 1183 HOH HOH . LA 6 HOH A 84 1184 1184 HOH HOH . LA 6 HOH A 85 1185 1185 HOH HOH . LA 6 HOH A 86 1186 1186 HOH HOH . LA 6 HOH A 87 1187 1187 HOH HOH . LA 6 HOH A 88 1188 1188 HOH HOH . LA 6 HOH A 89 1189 1189 HOH HOH . LA 6 HOH A 90 1190 1190 HOH HOH . LA 6 HOH A 91 1191 1191 HOH HOH . LA 6 HOH A 92 1192 1192 HOH HOH . LA 6 HOH A 93 1193 1193 HOH HOH . LA 6 HOH A 94 1194 1194 HOH HOH . LA 6 HOH A 95 1195 1195 HOH HOH . LA 6 HOH A 96 1196 1196 HOH HOH . LA 6 HOH A 97 1197 1197 HOH HOH . LA 6 HOH A 98 1198 1198 HOH HOH . LA 6 HOH A 99 1199 1199 HOH HOH . LA 6 HOH A 100 1200 1200 HOH HOH . LA 6 HOH A 101 1201 1201 HOH HOH . LA 6 HOH A 102 1202 1202 HOH HOH . LA 6 HOH A 103 1203 1203 HOH HOH . LA 6 HOH A 104 1204 1204 HOH HOH . LA 6 HOH A 105 1205 1205 HOH HOH . LA 6 HOH A 106 1206 1206 HOH HOH . LA 6 HOH A 107 1207 1207 HOH HOH . LA 6 HOH A 108 1208 1208 HOH HOH . LA 6 HOH A 109 1209 1209 HOH HOH . LA 6 HOH A 110 1210 1210 HOH HOH . LA 6 HOH A 111 1211 1211 HOH HOH . LA 6 HOH A 112 1212 1212 HOH HOH . LA 6 HOH A 113 1213 1213 HOH HOH . LA 6 HOH A 114 1214 1214 HOH HOH . LA 6 HOH A 115 1215 1215 HOH HOH . LA 6 HOH A 116 1216 1216 HOH HOH . LA 6 HOH A 117 1217 1217 HOH HOH . LA 6 HOH A 118 1218 1218 HOH HOH . LA 6 HOH A 119 1219 1219 HOH HOH . LA 6 HOH A 120 1220 1220 HOH HOH . LA 6 HOH A 121 1221 1221 HOH HOH . LA 6 HOH A 122 1222 1222 HOH HOH . LA 6 HOH A 123 1223 1223 HOH HOH . LA 6 HOH A 124 1224 1224 HOH HOH . LA 6 HOH A 125 1225 1225 HOH HOH . LA 6 HOH A 126 1226 1226 HOH HOH . LA 6 HOH A 127 1227 1227 HOH HOH . LA 6 HOH A 128 1228 1228 HOH HOH . LA 6 HOH A 129 1229 1229 HOH HOH . LA 6 HOH A 130 1230 1230 HOH HOH . LA 6 HOH A 131 1231 1231 HOH HOH . LA 6 HOH A 132 1232 1232 HOH HOH . LA 6 HOH A 133 1233 1233 HOH HOH . LA 6 HOH A 134 1234 1234 HOH HOH . LA 6 HOH A 135 1235 1235 HOH HOH . LA 6 HOH A 136 1236 1236 HOH HOH . LA 6 HOH A 137 1237 1237 HOH HOH . LA 6 HOH A 138 1238 1238 HOH HOH . LA 6 HOH A 139 1239 1239 HOH HOH . LA 6 HOH A 140 1240 1240 HOH HOH . LA 6 HOH A 141 1241 1241 HOH HOH . LA 6 HOH A 142 1242 1242 HOH HOH . LA 6 HOH A 143 1243 1243 HOH HOH . LA 6 HOH A 144 1244 1244 HOH HOH . LA 6 HOH A 145 1245 1245 HOH HOH . LA 6 HOH A 146 1246 1246 HOH HOH . LA 6 HOH A 147 1247 1247 HOH HOH . LA 6 HOH A 148 1248 1248 HOH HOH . LA 6 HOH A 149 1249 1249 HOH HOH . LA 6 HOH A 150 1250 1250 HOH HOH . LA 6 HOH A 151 1251 1251 HOH HOH . LA 6 HOH A 152 1252 1252 HOH HOH . LA 6 HOH A 153 1253 1253 HOH HOH . LA 6 HOH A 154 1254 1254 HOH HOH . LA 6 HOH A 155 1255 1255 HOH HOH . LA 6 HOH A 156 1256 1256 HOH HOH . LA 6 HOH A 157 1257 1257 HOH HOH . LA 6 HOH A 158 1258 1258 HOH HOH . LA 6 HOH A 159 1259 1259 HOH HOH . LA 6 HOH A 160 1260 1260 HOH HOH . LA 6 HOH A 161 1261 1261 HOH HOH . LA 6 HOH A 162 1262 1262 HOH HOH . LA 6 HOH A 163 1263 1263 HOH HOH . LA 6 HOH A 164 1264 1264 HOH HOH . LA 6 HOH A 165 1265 1265 HOH HOH . LA 6 HOH A 166 1266 1266 HOH HOH . LA 6 HOH A 167 1267 1267 HOH HOH . LA 6 HOH A 168 1268 1268 HOH HOH . LA 6 HOH A 169 1269 1269 HOH HOH . LA 6 HOH A 170 1270 1270 HOH HOH . LA 6 HOH A 171 1271 1271 HOH HOH . LA 6 HOH A 172 1272 1272 HOH HOH . LA 6 HOH A 173 1273 1273 HOH HOH . LA 6 HOH A 174 1274 1274 HOH HOH . LA 6 HOH A 175 1275 1275 HOH HOH . LA 6 HOH A 176 1276 1276 HOH HOH . LA 6 HOH A 177 1277 1277 HOH HOH . LA 6 HOH A 178 1278 1278 HOH HOH . LA 6 HOH A 179 1279 1279 HOH HOH . LA 6 HOH A 180 1280 1280 HOH HOH . LA 6 HOH A 181 1281 1281 HOH HOH . LA 6 HOH A 182 1282 1282 HOH HOH . LA 6 HOH A 183 1283 1283 HOH HOH . LA 6 HOH A 184 1284 1284 HOH HOH . LA 6 HOH A 185 1285 1285 HOH HOH . LA 6 HOH A 186 1286 1286 HOH HOH . LA 6 HOH A 187 1287 1287 HOH HOH . LA 6 HOH A 188 1288 1288 HOH HOH . LA 6 HOH A 189 1289 1289 HOH HOH . LA 6 HOH A 190 1290 1290 HOH HOH . LA 6 HOH A 191 1291 1291 HOH HOH . LA 6 HOH A 192 1292 1292 HOH HOH . LA 6 HOH A 193 1293 1293 HOH HOH . LA 6 HOH A 194 1294 1294 HOH HOH . LA 6 HOH A 195 1295 1295 HOH HOH . LA 6 HOH A 196 1296 1296 HOH HOH . LA 6 HOH A 197 1297 1297 HOH HOH . LA 6 HOH A 198 1298 1298 HOH HOH . LA 6 HOH A 199 1299 1299 HOH HOH . LA 6 HOH A 200 1300 1300 HOH HOH . LA 6 HOH A 201 1301 1301 HOH HOH . LA 6 HOH A 202 1302 1302 HOH HOH . LA 6 HOH A 203 1303 1303 HOH HOH . LA 6 HOH A 204 1304 1304 HOH HOH . LA 6 HOH A 205 1305 1305 HOH HOH . LA 6 HOH A 206 1306 1306 HOH HOH . LA 6 HOH A 207 1307 1307 HOH HOH . LA 6 HOH A 208 1308 1308 HOH HOH . LA 6 HOH A 209 1309 1309 HOH HOH . LA 6 HOH A 210 1310 1310 HOH HOH . LA 6 HOH A 211 1311 1311 HOH HOH . LA 6 HOH A 212 1312 1312 HOH HOH . LA 6 HOH A 213 1313 1313 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -17.319 _atom_site.Cartn_y 65.687 _atom_site.Cartn_z 47.782 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #