data_5XAS # _model_server_result.job_id dCGdgy0gQuzEeFBRA75NVg _model_server_result.datetime_utc '2024-10-19 13:27:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xas # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 5XAS # _exptl.entry_id 5XAS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 97.14 _cell.angle_beta 100.16 _cell.angle_gamma 94.59 _cell.entry_id 5XAS _cell.length_a 51.705 _cell.length_b 83.34 _cell.length_c 81.06 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XAS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 171 A ILE 181 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc2 A O GLY 173 A GLY 183 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc3 A O MET 389 A MET 399 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? metalc ? metalc4 A O ASN 391 A ASN 401 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc5 C NA NA . A NA 501 1_555 H O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc6 C NA NA . A NA 501 1_555 H O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? metalc ? metalc7 B O ILE 171 B ILE 181 1_555 F NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc8 B O GLY 173 B GLY 183 1_555 F NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc9 B O MET 389 B MET 399 1_555 F NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc10 B O ASN 391 B ASN 401 1_555 F NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc11 F NA NA . B NA 501 1_555 I O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc12 F NA NA . B NA 501 1_555 I O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 131 n n CAC OA1 FLC doub 132 n n CAC OA2 FLC sing 133 n n CA CB FLC sing 134 n n CA HA1 FLC sing 135 n n CA HA2 FLC sing 136 n n CB CBC FLC sing 137 n n CB CG FLC sing 138 n n CB OHB FLC sing 139 n n CBC OB1 FLC doub 140 n n CBC OB2 FLC sing 141 n n CG CGC FLC sing 142 n n CG HG1 FLC sing 143 n n CG HG2 FLC sing 144 n n CGC OG1 FLC doub 145 n n CGC OG2 FLC sing 146 n n OHB HOB FLC sing 147 n n # _atom_sites.entry_id 5XAS _atom_sites.fract_transf_matrix[1][1] 0.01934 _atom_sites.fract_transf_matrix[1][2] 0.001553 _atom_sites.fract_transf_matrix[1][3] 0.003722 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012038 _atom_sites.fract_transf_matrix[2][3] 0.001716 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 501 502 NA NA . D 3 FLC A 1 502 1349 FLC FLC . E 4 BOG A 1 503 1350 BOG BOG . F 2 NA B 1 501 502 NA NA . G 3 FLC B 1 502 1349 FLC FLC . H 5 HOH A 1 601 2007 HOH HOH . H 5 HOH A 2 602 2006 HOH HOH . I 5 HOH B 1 601 2007 HOH HOH . I 5 HOH B 2 602 2006 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . G 3 -32.324 -82.643 55.056 1 198.11 ? CAC FLC 502 B 1 HETATM 2 C CA FLC . . . G 3 -33.2 -82.764 53.827 1 200.18 ? CA FLC 502 B 1 HETATM 3 C CB FLC . . . G 3 -34.697 -82.969 53.951 1 199.33 ? CB FLC 502 B 1 HETATM 4 C CBC FLC . . . G 3 -35.29 -83.881 52.945 1 194.19 ? CBC FLC 502 B 1 HETATM 5 C CG FLC . . . G 3 -35.651 -82.102 54.72 1 194.52 ? CG FLC 502 B 1 HETATM 6 C CGC FLC . . . G 3 -35.456 -80.746 54.072 1 187.85 ? CGC FLC 502 B 1 HETATM 7 O OA1 FLC . . . G 3 -31.316 -81.918 54.925 1 183.19 ? OA1 FLC 502 B 1 HETATM 8 O OA2 FLC . . . G 3 -32.577 -83.285 56.111 1 209.03 ? OA2 FLC 502 B 1 HETATM 9 O OB1 FLC . . . G 3 -35.24 -83.382 51.804 1 195.96 ? OB1 FLC 502 B 1 HETATM 10 O OB2 FLC . . . G 3 -35.799 -85.001 53.185 1 181.81 ? OB2 FLC 502 B 1 HETATM 11 O OG1 FLC . . . G 3 -35.424 -80.555 52.822 1 173.28 ? OG1 FLC 502 B 1 HETATM 12 O OG2 FLC . . . G 3 -35.289 -79.828 54.877 1 187.55 ? OG2 FLC 502 B 1 HETATM 13 O OHB FLC . . . G 3 -34.615 -83.968 55.029 1 214.89 ? OHB FLC 502 B 1 # _model_server_stats.io_time_ms 125 _model_server_stats.parse_time_ms 194 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #