data_5XBT # _model_server_result.job_id FXGsWqQaL0pRAlzzVk7uLA _model_server_result.datetime_utc '2024-12-01 06:07:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xbt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":306}' # _entry.id 5XBT # _exptl.entry_id 5XBT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XBT _cell.length_a 135.924 _cell.length_b 135.924 _cell.length_c 94.566 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XBT _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 N N N ? 4 O N N ? 4 P N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 336 n n C1 C2 PEG sing 337 n n C1 H11 PEG sing 338 n n C1 H12 PEG sing 339 n n O1 HO1 PEG sing 340 n n C2 O2 PEG sing 341 n n C2 H21 PEG sing 342 n n C2 H22 PEG sing 343 n n O2 C3 PEG sing 344 n n C3 C4 PEG sing 345 n n C3 H31 PEG sing 346 n n C3 H32 PEG sing 347 n n C4 O4 PEG sing 348 n n C4 H41 PEG sing 349 n n C4 H42 PEG sing 350 n n O4 HO4 PEG sing 351 n n # _atom_sites.entry_id 5XBT _atom_sites.fract_transf_matrix[1][1] 0.007357 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007357 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 C2E A 1 301 301 C2E C2E . D 2 C2E A 1 302 302 C2E C2E . E 3 GOL A 1 303 500 GOL GOL . F 4 PEG A 1 305 502 PEG PEG . G 4 PEG A 1 306 503 PEG PEG . H 4 PEG A 1 307 504 PEG PEG . I 5 IMD A 1 308 505 IMD IMD . J 2 C2E B 1 301 301 C2E C2E . K 2 C2E B 1 302 302 C2E C2E . L 3 GOL B 1 303 500 GOL GOL . M 3 GOL B 1 304 501 GOL GOL . N 4 PEG B 1 305 502 PEG PEG . O 4 PEG B 1 306 503 PEG PEG . P 4 PEG B 1 307 504 PEG PEG . Q 5 IMD B 1 308 505 IMD IMD . R 6 HOH A 1 401 35 HOH HOH . R 6 HOH A 2 402 37 HOH HOH . R 6 HOH A 3 403 131 HOH HOH . R 6 HOH A 4 404 142 HOH HOH . R 6 HOH A 5 405 155 HOH HOH . R 6 HOH A 6 406 89 HOH HOH . R 6 HOH A 7 407 123 HOH HOH . R 6 HOH A 8 408 14 HOH HOH . R 6 HOH A 9 409 62 HOH HOH . R 6 HOH A 10 410 154 HOH HOH . R 6 HOH A 11 411 80 HOH HOH . R 6 HOH A 12 412 3 HOH HOH . R 6 HOH A 13 413 141 HOH HOH . R 6 HOH A 14 414 93 HOH HOH . R 6 HOH A 15 415 98 HOH HOH . R 6 HOH A 16 416 148 HOH HOH . R 6 HOH A 17 417 149 HOH HOH . R 6 HOH A 18 418 86 HOH HOH . R 6 HOH A 19 419 55 HOH HOH . R 6 HOH A 20 420 67 HOH HOH . R 6 HOH A 21 421 104 HOH HOH . R 6 HOH A 22 422 66 HOH HOH . R 6 HOH A 23 423 6 HOH HOH . R 6 HOH A 24 424 20 HOH HOH . R 6 HOH A 25 425 127 HOH HOH . R 6 HOH A 26 426 68 HOH HOH . R 6 HOH A 27 427 52 HOH HOH . R 6 HOH A 28 428 161 HOH HOH . R 6 HOH A 29 429 9 HOH HOH . R 6 HOH A 30 430 8 HOH HOH . R 6 HOH A 31 431 28 HOH HOH . R 6 HOH A 32 432 22 HOH HOH . R 6 HOH A 33 433 81 HOH HOH . R 6 HOH A 34 434 115 HOH HOH . R 6 HOH A 35 435 121 HOH HOH . R 6 HOH A 36 436 114 HOH HOH . R 6 HOH A 37 437 18 HOH HOH . R 6 HOH A 38 438 33 HOH HOH . R 6 HOH A 39 439 78 HOH HOH . R 6 HOH A 40 440 41 HOH HOH . R 6 HOH A 41 441 23 HOH HOH . R 6 HOH A 42 442 110 HOH HOH . R 6 HOH A 43 443 156 HOH HOH . R 6 HOH A 44 444 31 HOH HOH . R 6 HOH A 45 445 167 HOH HOH . R 6 HOH A 46 446 109 HOH HOH . R 6 HOH A 47 447 48 HOH HOH . R 6 HOH A 48 448 144 HOH HOH . R 6 HOH A 49 449 64 HOH HOH . R 6 HOH A 50 450 65 HOH HOH . R 6 HOH A 51 451 69 HOH HOH . R 6 HOH A 52 452 54 HOH HOH . R 6 HOH A 53 453 160 HOH HOH . R 6 HOH A 54 454 77 HOH HOH . R 6 HOH A 55 455 15 HOH HOH . R 6 HOH A 56 456 108 HOH HOH . R 6 HOH A 57 457 13 HOH HOH . R 6 HOH A 58 458 168 HOH HOH . R 6 HOH A 59 459 116 HOH HOH . R 6 HOH A 60 460 16 HOH HOH . R 6 HOH A 61 461 118 HOH HOH . R 6 HOH A 62 462 112 HOH HOH . R 6 HOH A 63 463 11 HOH HOH . R 6 HOH A 64 464 101 HOH HOH . R 6 HOH A 65 465 166 HOH HOH . R 6 HOH A 66 466 111 HOH HOH . R 6 HOH A 67 467 83 HOH HOH . R 6 HOH A 68 468 1 HOH HOH . R 6 HOH A 69 469 51 HOH HOH . R 6 HOH A 70 470 29 HOH HOH . R 6 HOH A 71 471 103 HOH HOH . R 6 HOH A 72 472 95 HOH HOH . R 6 HOH A 73 473 137 HOH HOH . R 6 HOH A 74 474 61 HOH HOH . R 6 HOH A 75 475 134 HOH HOH . R 6 HOH A 76 476 82 HOH HOH . R 6 HOH A 77 477 96 HOH HOH . R 6 HOH A 78 478 129 HOH HOH . R 6 HOH A 79 479 124 HOH HOH . R 6 HOH A 80 480 170 HOH HOH . R 6 HOH A 81 481 153 HOH HOH . R 6 HOH A 82 482 85 HOH HOH . R 6 HOH A 83 483 120 HOH HOH . R 6 HOH A 84 484 146 HOH HOH . R 6 HOH A 85 485 165 HOH HOH . R 6 HOH A 86 486 138 HOH HOH . R 6 HOH A 87 487 152 HOH HOH . S 6 HOH B 1 401 39 HOH HOH . S 6 HOH B 2 402 21 HOH HOH . S 6 HOH B 3 403 84 HOH HOH . S 6 HOH B 4 404 88 HOH HOH . S 6 HOH B 5 405 74 HOH HOH . S 6 HOH B 6 406 92 HOH HOH . S 6 HOH B 7 407 126 HOH HOH . S 6 HOH B 8 408 24 HOH HOH . S 6 HOH B 9 409 132 HOH HOH . S 6 HOH B 10 410 122 HOH HOH . S 6 HOH B 11 411 102 HOH HOH . S 6 HOH B 12 412 2 HOH HOH . S 6 HOH B 13 413 113 HOH HOH . S 6 HOH B 14 414 163 HOH HOH . S 6 HOH B 15 415 99 HOH HOH . S 6 HOH B 16 416 25 HOH HOH . S 6 HOH B 17 417 46 HOH HOH . S 6 HOH B 18 418 53 HOH HOH . S 6 HOH B 19 419 43 HOH HOH . S 6 HOH B 20 420 30 HOH HOH . S 6 HOH B 21 421 94 HOH HOH . S 6 HOH B 22 422 38 HOH HOH . S 6 HOH B 23 423 10 HOH HOH . S 6 HOH B 24 424 117 HOH HOH . S 6 HOH B 25 425 60 HOH HOH . S 6 HOH B 26 426 147 HOH HOH . S 6 HOH B 27 427 5 HOH HOH . S 6 HOH B 28 428 50 HOH HOH . S 6 HOH B 29 429 47 HOH HOH . S 6 HOH B 30 430 32 HOH HOH . S 6 HOH B 31 431 133 HOH HOH . S 6 HOH B 32 432 97 HOH HOH . S 6 HOH B 33 433 34 HOH HOH . S 6 HOH B 34 434 56 HOH HOH . S 6 HOH B 35 435 42 HOH HOH . S 6 HOH B 36 436 130 HOH HOH . S 6 HOH B 37 437 49 HOH HOH . S 6 HOH B 38 438 158 HOH HOH . S 6 HOH B 39 439 17 HOH HOH . S 6 HOH B 40 440 73 HOH HOH . S 6 HOH B 41 441 7 HOH HOH . S 6 HOH B 42 442 157 HOH HOH . S 6 HOH B 43 443 58 HOH HOH . S 6 HOH B 44 444 70 HOH HOH . S 6 HOH B 45 445 59 HOH HOH . S 6 HOH B 46 446 169 HOH HOH . S 6 HOH B 47 447 75 HOH HOH . S 6 HOH B 48 448 105 HOH HOH . S 6 HOH B 49 449 119 HOH HOH . S 6 HOH B 50 450 72 HOH HOH . S 6 HOH B 51 451 90 HOH HOH . S 6 HOH B 52 452 150 HOH HOH . S 6 HOH B 53 453 45 HOH HOH . S 6 HOH B 54 454 107 HOH HOH . S 6 HOH B 55 455 4 HOH HOH . S 6 HOH B 56 456 57 HOH HOH . S 6 HOH B 57 457 12 HOH HOH . S 6 HOH B 58 458 26 HOH HOH . S 6 HOH B 59 459 19 HOH HOH . S 6 HOH B 60 460 125 HOH HOH . S 6 HOH B 61 461 79 HOH HOH . S 6 HOH B 62 462 159 HOH HOH . S 6 HOH B 63 463 76 HOH HOH . S 6 HOH B 64 464 44 HOH HOH . S 6 HOH B 65 465 36 HOH HOH . S 6 HOH B 66 466 145 HOH HOH . S 6 HOH B 67 467 63 HOH HOH . S 6 HOH B 68 468 27 HOH HOH . S 6 HOH B 69 469 40 HOH HOH . S 6 HOH B 70 470 87 HOH HOH . S 6 HOH B 71 471 100 HOH HOH . S 6 HOH B 72 472 91 HOH HOH . S 6 HOH B 73 473 106 HOH HOH . S 6 HOH B 74 474 139 HOH HOH . S 6 HOH B 75 475 71 HOH HOH . S 6 HOH B 76 476 136 HOH HOH . S 6 HOH B 77 477 151 HOH HOH . S 6 HOH B 78 478 140 HOH HOH . S 6 HOH B 79 479 128 HOH HOH . S 6 HOH B 80 480 135 HOH HOH . S 6 HOH B 81 481 143 HOH HOH . S 6 HOH B 82 482 164 HOH HOH . S 6 HOH B 83 483 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . O 4 -7.968 -49.85 -0.821 1 89.87 ? C1 PEG 306 B 1 HETATM 2 O O1 PEG . . . O 4 -7.214 -49.434 0.321 1 92.7 ? O1 PEG 306 B 1 HETATM 3 C C2 PEG . . . O 4 -7.033 -50.002 -2.012 1 79.62 ? C2 PEG 306 B 1 HETATM 4 O O2 PEG . . . O 4 -7.743 -49.702 -3.21 1 87.7 ? O2 PEG 306 B 1 HETATM 5 C C3 PEG . . . O 4 -7.048 -48.753 -4.015 1 92.2 ? C3 PEG 306 B 1 HETATM 6 C C4 PEG . . . O 4 -8.016 -48.126 -5.01 1 95.74 ? C4 PEG 306 B 1 HETATM 7 O O4 PEG . . . O 4 -7.287 -47.487 -6.062 1 96.02 ? O4 PEG 306 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #