data_5XCV # _model_server_result.job_id T9BlY9CnmH9zeLGtfiOjyA _model_server_result.datetime_utc '2024-11-26 02:10:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xcv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":202}' # _entry.id 5XCV # _exptl.entry_id 5XCV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.46 _cell.angle_gamma 90 _cell.entry_id 5XCV _cell.length_a 145.617 _cell.length_b 50.122 _cell.length_c 121.868 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XCV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K 1 1 D,E,F,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 22 1_555 A SG CYS 100 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf2 A SG CYS 120 A CYS 112 1_555 B SG CYS 153 B CYS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf3 B SG CYS 26 B CYS 23 1_555 B SG CYS 95 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf4 D SG CYS 26 D CYS 22 1_555 D SG CYS 100 D CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf5 D SG CYS 120 D CYS 112 1_555 E SG CYS 153 E CYS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf6 E SG CYS 26 E CYS 23 1_555 E SG CYS 95 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 A OD1 ASP 135 A ASP 127 1_555 H CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc2 A OE1 GLU 153 A GLU 145 1_555 G CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc3 A OE2 GLU 153 A GLU 145 1_555 G CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc4 A OE1 GLN 156 A GLN 148 1_555 G CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc5 G CA CA . A CA 201 1_555 I O HOH . A HOH 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc6 G CA CA . A CA 201 1_555 D OD2 ASP 135 D ASP 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc7 G CA CA . A CA 201 1_555 L O HOH . D HOH 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc8 H CA CA . A CA 202 1_555 D OE1 GLU 153 D GLU 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc9 H CA CA . A CA 202 1_555 D OE2 GLU 153 D GLU 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc10 H CA CA . A CA 202 1_555 D OE1 GLN 156 D GLN 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc11 H CA CA . A CA 202 1_555 L O HOH . D HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc12 H CA CA . A CA 202 1_555 L O HOH . D HOH 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc13 H CA CA . A CA 202 1_555 L O HOH . D HOH 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5XCV _atom_sites.fract_transf_matrix[1][1] 0.006867 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002562 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019951 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 CA A 1 201 1 CA CA . H 4 CA A 1 202 2 CA CA . I 5 HOH A 1 301 76 HOH HOH . I 5 HOH A 2 302 163 HOH HOH . I 5 HOH A 3 303 220 HOH HOH . I 5 HOH A 4 304 85 HOH HOH . I 5 HOH A 5 305 80 HOH HOH . I 5 HOH A 6 306 13 HOH HOH . I 5 HOH A 7 307 38 HOH HOH . I 5 HOH A 8 308 203 HOH HOH . I 5 HOH A 9 309 108 HOH HOH . I 5 HOH A 10 310 36 HOH HOH . I 5 HOH A 11 311 243 HOH HOH . I 5 HOH A 12 312 4 HOH HOH . I 5 HOH A 13 313 25 HOH HOH . I 5 HOH A 14 314 104 HOH HOH . I 5 HOH A 15 315 197 HOH HOH . I 5 HOH A 16 316 40 HOH HOH . I 5 HOH A 17 317 178 HOH HOH . I 5 HOH A 18 318 90 HOH HOH . I 5 HOH A 19 319 57 HOH HOH . I 5 HOH A 20 320 161 HOH HOH . I 5 HOH A 21 321 71 HOH HOH . I 5 HOH A 22 322 61 HOH HOH . I 5 HOH A 23 323 21 HOH HOH . I 5 HOH A 24 324 10 HOH HOH . I 5 HOH A 25 325 24 HOH HOH . I 5 HOH A 26 326 45 HOH HOH . I 5 HOH A 27 327 157 HOH HOH . I 5 HOH A 28 328 49 HOH HOH . I 5 HOH A 29 329 67 HOH HOH . I 5 HOH A 30 330 42 HOH HOH . I 5 HOH A 31 331 12 HOH HOH . I 5 HOH A 32 332 109 HOH HOH . I 5 HOH A 33 333 118 HOH HOH . I 5 HOH A 34 334 149 HOH HOH . I 5 HOH A 35 335 2 HOH HOH . I 5 HOH A 36 336 151 HOH HOH . I 5 HOH A 37 337 113 HOH HOH . I 5 HOH A 38 338 39 HOH HOH . I 5 HOH A 39 339 117 HOH HOH . I 5 HOH A 40 340 55 HOH HOH . I 5 HOH A 41 341 7 HOH HOH . I 5 HOH A 42 342 217 HOH HOH . I 5 HOH A 43 343 165 HOH HOH . I 5 HOH A 44 344 223 HOH HOH . I 5 HOH A 45 345 44 HOH HOH . I 5 HOH A 46 346 50 HOH HOH . I 5 HOH A 47 347 148 HOH HOH . I 5 HOH A 48 348 59 HOH HOH . I 5 HOH A 49 349 8 HOH HOH . I 5 HOH A 50 350 58 HOH HOH . I 5 HOH A 51 351 46 HOH HOH . I 5 HOH A 52 352 23 HOH HOH . I 5 HOH A 53 353 51 HOH HOH . I 5 HOH A 54 354 100 HOH HOH . I 5 HOH A 55 355 98 HOH HOH . I 5 HOH A 56 356 162 HOH HOH . I 5 HOH A 57 357 181 HOH HOH . I 5 HOH A 58 358 132 HOH HOH . I 5 HOH A 59 359 18 HOH HOH . I 5 HOH A 60 360 32 HOH HOH . I 5 HOH A 61 361 159 HOH HOH . I 5 HOH A 62 362 94 HOH HOH . I 5 HOH A 63 363 198 HOH HOH . I 5 HOH A 64 364 144 HOH HOH . I 5 HOH A 65 365 96 HOH HOH . I 5 HOH A 66 366 183 HOH HOH . I 5 HOH A 67 367 145 HOH HOH . I 5 HOH A 68 368 225 HOH HOH . I 5 HOH A 69 369 82 HOH HOH . I 5 HOH A 70 370 102 HOH HOH . I 5 HOH A 71 371 142 HOH HOH . I 5 HOH A 72 372 173 HOH HOH . I 5 HOH A 73 373 229 HOH HOH . I 5 HOH A 74 374 191 HOH HOH . I 5 HOH A 75 375 202 HOH HOH . I 5 HOH A 76 376 133 HOH HOH . I 5 HOH A 77 377 224 HOH HOH . I 5 HOH A 78 378 205 HOH HOH . J 5 HOH B 1 201 60 HOH HOH . J 5 HOH B 2 202 1 HOH HOH . J 5 HOH B 3 203 208 HOH HOH . J 5 HOH B 4 204 152 HOH HOH . J 5 HOH B 5 205 35 HOH HOH . J 5 HOH B 6 206 244 HOH HOH . J 5 HOH B 7 207 83 HOH HOH . J 5 HOH B 8 208 134 HOH HOH . J 5 HOH B 9 209 179 HOH HOH . J 5 HOH B 10 210 107 HOH HOH . J 5 HOH B 11 211 9 HOH HOH . J 5 HOH B 12 212 233 HOH HOH . J 5 HOH B 13 213 31 HOH HOH . J 5 HOH B 14 214 68 HOH HOH . J 5 HOH B 15 215 171 HOH HOH . J 5 HOH B 16 216 131 HOH HOH . J 5 HOH B 17 217 101 HOH HOH . J 5 HOH B 18 218 70 HOH HOH . J 5 HOH B 19 219 27 HOH HOH . J 5 HOH B 20 220 6 HOH HOH . J 5 HOH B 21 221 19 HOH HOH . J 5 HOH B 22 222 47 HOH HOH . J 5 HOH B 23 223 228 HOH HOH . J 5 HOH B 24 224 29 HOH HOH . J 5 HOH B 25 225 214 HOH HOH . J 5 HOH B 26 226 22 HOH HOH . J 5 HOH B 27 227 150 HOH HOH . J 5 HOH B 28 228 79 HOH HOH . J 5 HOH B 29 229 128 HOH HOH . J 5 HOH B 30 230 188 HOH HOH . J 5 HOH B 31 231 242 HOH HOH . J 5 HOH B 32 232 54 HOH HOH . J 5 HOH B 33 233 199 HOH HOH . J 5 HOH B 34 234 33 HOH HOH . J 5 HOH B 35 235 138 HOH HOH . J 5 HOH B 36 236 218 HOH HOH . J 5 HOH B 37 237 16 HOH HOH . J 5 HOH B 38 238 48 HOH HOH . J 5 HOH B 39 239 97 HOH HOH . J 5 HOH B 40 240 139 HOH HOH . J 5 HOH B 41 241 20 HOH HOH . J 5 HOH B 42 242 111 HOH HOH . J 5 HOH B 43 243 37 HOH HOH . J 5 HOH B 44 244 26 HOH HOH . J 5 HOH B 45 245 62 HOH HOH . J 5 HOH B 46 246 15 HOH HOH . J 5 HOH B 47 247 34 HOH HOH . J 5 HOH B 48 248 164 HOH HOH . J 5 HOH B 49 249 187 HOH HOH . J 5 HOH B 50 250 125 HOH HOH . J 5 HOH B 51 251 180 HOH HOH . J 5 HOH B 52 252 206 HOH HOH . J 5 HOH B 53 253 78 HOH HOH . J 5 HOH B 54 254 115 HOH HOH . J 5 HOH B 55 255 124 HOH HOH . J 5 HOH B 56 256 158 HOH HOH . J 5 HOH B 57 257 140 HOH HOH . J 5 HOH B 58 258 204 HOH HOH . J 5 HOH B 59 259 130 HOH HOH . J 5 HOH B 60 260 211 HOH HOH . J 5 HOH B 61 261 212 HOH HOH . J 5 HOH B 62 262 91 HOH HOH . J 5 HOH B 63 263 156 HOH HOH . J 5 HOH B 64 264 77 HOH HOH . J 5 HOH B 65 265 174 HOH HOH . J 5 HOH B 66 266 185 HOH HOH . J 5 HOH B 67 267 246 HOH HOH . J 5 HOH B 68 268 231 HOH HOH . J 5 HOH B 69 269 193 HOH HOH . J 5 HOH B 70 270 114 HOH HOH . K 5 HOH C 1 101 52 HOH HOH . K 5 HOH C 2 102 239 HOH HOH . K 5 HOH C 3 103 43 HOH HOH . K 5 HOH C 4 104 17 HOH HOH . L 5 HOH D 1 301 182 HOH HOH . L 5 HOH D 2 302 89 HOH HOH . L 5 HOH D 3 303 226 HOH HOH . L 5 HOH D 4 304 232 HOH HOH . L 5 HOH D 5 305 238 HOH HOH . L 5 HOH D 6 306 169 HOH HOH . L 5 HOH D 7 307 69 HOH HOH . L 5 HOH D 8 308 28 HOH HOH . L 5 HOH D 9 309 147 HOH HOH . L 5 HOH D 10 310 63 HOH HOH . L 5 HOH D 11 311 75 HOH HOH . L 5 HOH D 12 312 95 HOH HOH . L 5 HOH D 13 313 105 HOH HOH . L 5 HOH D 14 314 11 HOH HOH . L 5 HOH D 15 315 93 HOH HOH . L 5 HOH D 16 316 92 HOH HOH . L 5 HOH D 17 317 122 HOH HOH . L 5 HOH D 18 318 153 HOH HOH . L 5 HOH D 19 319 127 HOH HOH . L 5 HOH D 20 320 74 HOH HOH . L 5 HOH D 21 321 5 HOH HOH . L 5 HOH D 22 322 56 HOH HOH . L 5 HOH D 23 323 72 HOH HOH . L 5 HOH D 24 324 135 HOH HOH . L 5 HOH D 25 325 234 HOH HOH . L 5 HOH D 26 326 3 HOH HOH . L 5 HOH D 27 327 222 HOH HOH . L 5 HOH D 28 328 175 HOH HOH . L 5 HOH D 29 329 146 HOH HOH . L 5 HOH D 30 330 221 HOH HOH . L 5 HOH D 31 331 123 HOH HOH . L 5 HOH D 32 332 227 HOH HOH . L 5 HOH D 33 333 73 HOH HOH . L 5 HOH D 34 334 84 HOH HOH . L 5 HOH D 35 335 41 HOH HOH . L 5 HOH D 36 336 136 HOH HOH . L 5 HOH D 37 337 177 HOH HOH . L 5 HOH D 38 338 119 HOH HOH . L 5 HOH D 39 339 99 HOH HOH . L 5 HOH D 40 340 141 HOH HOH . L 5 HOH D 41 341 172 HOH HOH . L 5 HOH D 42 342 235 HOH HOH . L 5 HOH D 43 343 200 HOH HOH . L 5 HOH D 44 344 166 HOH HOH . L 5 HOH D 45 345 215 HOH HOH . L 5 HOH D 46 346 207 HOH HOH . L 5 HOH D 47 347 86 HOH HOH . L 5 HOH D 48 348 88 HOH HOH . L 5 HOH D 49 349 216 HOH HOH . L 5 HOH D 50 350 14 HOH HOH . L 5 HOH D 51 351 195 HOH HOH . L 5 HOH D 52 352 112 HOH HOH . L 5 HOH D 53 353 209 HOH HOH . L 5 HOH D 54 354 201 HOH HOH . L 5 HOH D 55 355 236 HOH HOH . L 5 HOH D 56 356 126 HOH HOH . L 5 HOH D 57 357 230 HOH HOH . L 5 HOH D 58 358 219 HOH HOH . L 5 HOH D 59 359 168 HOH HOH . L 5 HOH D 60 360 160 HOH HOH . L 5 HOH D 61 361 210 HOH HOH . L 5 HOH D 62 362 190 HOH HOH . L 5 HOH D 63 363 194 HOH HOH . L 5 HOH D 64 364 241 HOH HOH . L 5 HOH D 65 365 170 HOH HOH . M 5 HOH E 1 201 103 HOH HOH . M 5 HOH E 2 202 120 HOH HOH . M 5 HOH E 3 203 121 HOH HOH . M 5 HOH E 4 204 167 HOH HOH . M 5 HOH E 5 205 110 HOH HOH . M 5 HOH E 6 206 189 HOH HOH . M 5 HOH E 7 207 66 HOH HOH . M 5 HOH E 8 208 137 HOH HOH . M 5 HOH E 9 209 30 HOH HOH . M 5 HOH E 10 210 155 HOH HOH . M 5 HOH E 11 211 65 HOH HOH . M 5 HOH E 12 212 176 HOH HOH . M 5 HOH E 13 213 81 HOH HOH . M 5 HOH E 14 214 143 HOH HOH . M 5 HOH E 15 215 213 HOH HOH . M 5 HOH E 16 216 186 HOH HOH . M 5 HOH E 17 217 106 HOH HOH . M 5 HOH E 18 218 129 HOH HOH . M 5 HOH E 19 219 64 HOH HOH . M 5 HOH E 20 220 192 HOH HOH . M 5 HOH E 21 221 116 HOH HOH . M 5 HOH E 22 222 245 HOH HOH . M 5 HOH E 23 223 87 HOH HOH . M 5 HOH E 24 224 184 HOH HOH . M 5 HOH E 25 225 240 HOH HOH . M 5 HOH E 26 226 154 HOH HOH . M 5 HOH E 27 227 237 HOH HOH . M 5 HOH E 28 228 53 HOH HOH . M 5 HOH E 29 229 196 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 140.101 _atom_site.Cartn_y 44.181 _atom_site.Cartn_z 10.036 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #