data_5XCX # _model_server_result.job_id urFuFhqFt-iumGK4P-QVgQ _model_server_result.datetime_utc '2025-01-10 15:06:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xcx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 5XCX # _exptl.entry_id 5XCX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XCX _cell.length_a 69.2 _cell.length_b 69.2 _cell.length_c 171.54 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XCX _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 22 1_555 A SG CYS 97 A CYS 92 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.065 ? disulf ? disulf2 A SG CYS 23 A CYS 22 1_555 A SG CYS 97 A CYS 92 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.076 ? disulf ? disulf3 A SG CYS 120 A CYS 112 1_555 B SG CYS 152 B CYS 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf4 B SG CYS 27 B CYS 23 1_555 B SG CYS 93 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 306 n n P O2 PO4 sing 307 n n P O3 PO4 sing 308 n n P O4 PO4 sing 309 n n # _atom_sites.entry_id 5XCX _atom_sites.fract_transf_matrix[1][1] 0.014451 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014451 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00583 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 201 1 PO4 PO4 . D 3 PO4 A 1 202 2 PO4 PO4 . E 3 PO4 A 1 203 3 PO4 PO4 . F 4 CXS A 1 204 301 CXS CXS . G 4 CXS A 1 205 302 CXS CXS . H 5 GOL A 1 206 303 GOL GOL . I 6 HOH A 1 301 145 HOH HOH . I 6 HOH A 2 302 151 HOH HOH . I 6 HOH A 3 303 12 HOH HOH . I 6 HOH A 4 304 142 HOH HOH . I 6 HOH A 5 305 52 HOH HOH . I 6 HOH A 6 306 161 HOH HOH . I 6 HOH A 7 307 164 HOH HOH . I 6 HOH A 8 308 89 HOH HOH . I 6 HOH A 9 309 134 HOH HOH . I 6 HOH A 10 310 41 HOH HOH . I 6 HOH A 11 311 170 HOH HOH . I 6 HOH A 12 312 74 HOH HOH . I 6 HOH A 13 313 18 HOH HOH . I 6 HOH A 14 314 54 HOH HOH . I 6 HOH A 15 315 111 HOH HOH . I 6 HOH A 16 316 19 HOH HOH . I 6 HOH A 17 317 169 HOH HOH . I 6 HOH A 18 318 162 HOH HOH . I 6 HOH A 19 319 118 HOH HOH . I 6 HOH A 20 320 49 HOH HOH . I 6 HOH A 21 321 154 HOH HOH . I 6 HOH A 22 322 80 HOH HOH . I 6 HOH A 23 323 46 HOH HOH . I 6 HOH A 24 324 69 HOH HOH . I 6 HOH A 25 325 45 HOH HOH . I 6 HOH A 26 326 48 HOH HOH . I 6 HOH A 27 327 31 HOH HOH . I 6 HOH A 28 328 26 HOH HOH . I 6 HOH A 29 329 75 HOH HOH . I 6 HOH A 30 330 57 HOH HOH . I 6 HOH A 31 331 72 HOH HOH . I 6 HOH A 32 332 116 HOH HOH . I 6 HOH A 33 333 37 HOH HOH . I 6 HOH A 34 334 7 HOH HOH . I 6 HOH A 35 335 62 HOH HOH . I 6 HOH A 36 336 100 HOH HOH . I 6 HOH A 37 337 130 HOH HOH . I 6 HOH A 38 338 17 HOH HOH . I 6 HOH A 39 339 47 HOH HOH . I 6 HOH A 40 340 61 HOH HOH . I 6 HOH A 41 341 22 HOH HOH . I 6 HOH A 42 342 56 HOH HOH . I 6 HOH A 43 343 167 HOH HOH . I 6 HOH A 44 344 109 HOH HOH . I 6 HOH A 45 345 76 HOH HOH . I 6 HOH A 46 346 65 HOH HOH . I 6 HOH A 47 347 64 HOH HOH . I 6 HOH A 48 348 14 HOH HOH . I 6 HOH A 49 349 78 HOH HOH . I 6 HOH A 50 350 73 HOH HOH . I 6 HOH A 51 351 35 HOH HOH . I 6 HOH A 52 352 127 HOH HOH . I 6 HOH A 53 353 15 HOH HOH . I 6 HOH A 54 354 146 HOH HOH . I 6 HOH A 55 355 110 HOH HOH . I 6 HOH A 56 356 81 HOH HOH . I 6 HOH A 57 357 168 HOH HOH . I 6 HOH A 58 358 3 HOH HOH . I 6 HOH A 59 359 84 HOH HOH . I 6 HOH A 60 360 107 HOH HOH . I 6 HOH A 61 361 30 HOH HOH . I 6 HOH A 62 362 94 HOH HOH . I 6 HOH A 63 363 126 HOH HOH . I 6 HOH A 64 364 122 HOH HOH . I 6 HOH A 65 365 9 HOH HOH . I 6 HOH A 66 366 112 HOH HOH . I 6 HOH A 67 367 6 HOH HOH . I 6 HOH A 68 368 148 HOH HOH . I 6 HOH A 69 369 79 HOH HOH . I 6 HOH A 70 370 124 HOH HOH . I 6 HOH A 71 371 86 HOH HOH . J 6 HOH B 1 201 133 HOH HOH . J 6 HOH B 2 202 150 HOH HOH . J 6 HOH B 3 203 90 HOH HOH . J 6 HOH B 4 204 149 HOH HOH . J 6 HOH B 5 205 166 HOH HOH . J 6 HOH B 6 206 2 HOH HOH . J 6 HOH B 7 207 153 HOH HOH . J 6 HOH B 8 208 63 HOH HOH . J 6 HOH B 9 209 147 HOH HOH . J 6 HOH B 10 210 95 HOH HOH . J 6 HOH B 11 211 131 HOH HOH . J 6 HOH B 12 212 155 HOH HOH . J 6 HOH B 13 213 158 HOH HOH . J 6 HOH B 14 214 60 HOH HOH . J 6 HOH B 15 215 165 HOH HOH . J 6 HOH B 16 216 5 HOH HOH . J 6 HOH B 17 217 98 HOH HOH . J 6 HOH B 18 218 23 HOH HOH . J 6 HOH B 19 219 83 HOH HOH . J 6 HOH B 20 220 159 HOH HOH . J 6 HOH B 21 221 20 HOH HOH . J 6 HOH B 22 222 141 HOH HOH . J 6 HOH B 23 223 96 HOH HOH . J 6 HOH B 24 224 91 HOH HOH . J 6 HOH B 25 225 32 HOH HOH . J 6 HOH B 26 226 113 HOH HOH . J 6 HOH B 27 227 25 HOH HOH . J 6 HOH B 28 228 34 HOH HOH . J 6 HOH B 29 229 50 HOH HOH . J 6 HOH B 30 230 120 HOH HOH . J 6 HOH B 31 231 99 HOH HOH . J 6 HOH B 32 232 58 HOH HOH . J 6 HOH B 33 233 152 HOH HOH . J 6 HOH B 34 234 24 HOH HOH . J 6 HOH B 35 235 135 HOH HOH . J 6 HOH B 36 236 51 HOH HOH . J 6 HOH B 37 237 11 HOH HOH . J 6 HOH B 38 238 33 HOH HOH . J 6 HOH B 39 239 55 HOH HOH . J 6 HOH B 40 240 40 HOH HOH . J 6 HOH B 41 241 108 HOH HOH . J 6 HOH B 42 242 59 HOH HOH . J 6 HOH B 43 243 117 HOH HOH . J 6 HOH B 44 244 36 HOH HOH . J 6 HOH B 45 245 85 HOH HOH . J 6 HOH B 46 246 4 HOH HOH . J 6 HOH B 47 247 53 HOH HOH . J 6 HOH B 48 248 38 HOH HOH . J 6 HOH B 49 249 93 HOH HOH . J 6 HOH B 50 250 102 HOH HOH . J 6 HOH B 51 251 143 HOH HOH . J 6 HOH B 52 252 119 HOH HOH . J 6 HOH B 53 253 68 HOH HOH . J 6 HOH B 54 254 136 HOH HOH . J 6 HOH B 55 255 70 HOH HOH . J 6 HOH B 56 256 1 HOH HOH . J 6 HOH B 57 257 88 HOH HOH . J 6 HOH B 58 258 105 HOH HOH . J 6 HOH B 59 259 140 HOH HOH . J 6 HOH B 60 260 106 HOH HOH . J 6 HOH B 61 261 123 HOH HOH . J 6 HOH B 62 262 42 HOH HOH . J 6 HOH B 63 263 97 HOH HOH . J 6 HOH B 64 264 115 HOH HOH . J 6 HOH B 65 265 43 HOH HOH . J 6 HOH B 66 266 87 HOH HOH . J 6 HOH B 67 267 82 HOH HOH . J 6 HOH B 68 268 16 HOH HOH . J 6 HOH B 69 269 39 HOH HOH . J 6 HOH B 70 270 121 HOH HOH . J 6 HOH B 71 271 67 HOH HOH . J 6 HOH B 72 272 29 HOH HOH . J 6 HOH B 73 273 66 HOH HOH . J 6 HOH B 74 274 114 HOH HOH . J 6 HOH B 75 275 157 HOH HOH . J 6 HOH B 76 276 163 HOH HOH . J 6 HOH B 77 277 8 HOH HOH . J 6 HOH B 78 278 171 HOH HOH . J 6 HOH B 79 279 132 HOH HOH . J 6 HOH B 80 280 160 HOH HOH . J 6 HOH B 81 281 10 HOH HOH . J 6 HOH B 82 282 92 HOH HOH . J 6 HOH B 83 283 13 HOH HOH . J 6 HOH B 84 284 27 HOH HOH . J 6 HOH B 85 285 77 HOH HOH . J 6 HOH B 86 286 104 HOH HOH . J 6 HOH B 87 287 101 HOH HOH . J 6 HOH B 88 288 28 HOH HOH . J 6 HOH B 89 289 138 HOH HOH . J 6 HOH B 90 290 21 HOH HOH . J 6 HOH B 91 291 139 HOH HOH . J 6 HOH B 92 292 71 HOH HOH . J 6 HOH B 93 293 128 HOH HOH . J 6 HOH B 94 294 129 HOH HOH . J 6 HOH B 95 295 125 HOH HOH . J 6 HOH B 96 296 103 HOH HOH . J 6 HOH B 97 297 144 HOH HOH . J 6 HOH B 98 298 44 HOH HOH . J 6 HOH B 99 299 156 HOH HOH . J 6 HOH B 100 300 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 -20.309 51.137 4.164 1 48.34 ? P PO4 201 A 1 HETATM 2 O O1 PO4 . . . C 3 -19.683 51.977 3.067 1 47.51 ? O1 PO4 201 A 1 HETATM 3 O O2 PO4 . . . C 3 -21.497 51.856 4.767 1 47.29 ? O2 PO4 201 A 1 HETATM 4 O O3 PO4 . . . C 3 -20.812 49.845 3.559 1 48.32 ? O3 PO4 201 A 1 HETATM 5 O O4 PO4 . . . C 3 -19.274 50.845 5.228 1 48.14 ? O4 PO4 201 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #