data_5XDT # _model_server_result.job_id B5VXFKa1H1doqSu_5s-ixA _model_server_result.datetime_utc '2024-10-18 19:32:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xdt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5XDT # _exptl.entry_id 5XDT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.68 _cell.angle_gamma 90 _cell.entry_id 5XDT _cell.length_a 70.553 _cell.length_b 51.193 _cell.length_c 86.449 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XDT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 192 A LEU 200 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc2 A O VAL 195 A VAL 203 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc3 A OD1 ASN 200 A ASN 208 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? metalc ? metalc4 A O LEU 201 A LEU 209 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc5 C CA CA . A CA 402 1_555 D O1 ZI7 . A ZI7 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc6 C CA CA . A CA 402 1_555 G O HOH . A HOH 664 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.174 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 70 n n PB O2B GDP sing 71 n n PB O3B GDP sing 72 n n PB O3A GDP sing 73 n n O2B HOB2 GDP sing 74 n n O3B HOB3 GDP sing 75 n n O3A PA GDP sing 76 n n PA O1A GDP doub 77 n n PA O2A GDP sing 78 n n PA O5' GDP sing 79 n n O2A HOA2 GDP sing 80 n n O5' C5' GDP sing 81 n n C5' C4' GDP sing 82 n n C5' H5' GDP sing 83 n n C5' "H5''" GDP sing 84 n n C4' O4' GDP sing 85 n n C4' C3' GDP sing 86 n n C4' H4' GDP sing 87 n n O4' C1' GDP sing 88 n n C3' O3' GDP sing 89 n n C3' C2' GDP sing 90 n n C3' H3' GDP sing 91 n n O3' HO3' GDP sing 92 n n C2' O2' GDP sing 93 n n C2' C1' GDP sing 94 n n C2' H2' GDP sing 95 n n O2' HO2' GDP sing 96 n n C1' N9 GDP sing 97 n n C1' H1' GDP sing 98 n n N9 C8 GDP sing 99 n y N9 C4 GDP sing 100 n y C8 N7 GDP doub 101 n y C8 H8 GDP sing 102 n n N7 C5 GDP sing 103 n y C5 C6 GDP sing 104 n n C5 C4 GDP doub 105 n y C6 O6 GDP doub 106 n n C6 N1 GDP sing 107 n n N1 C2 GDP sing 108 n n N1 HN1 GDP sing 109 n n C2 N2 GDP sing 110 n n C2 N3 GDP doub 111 n n N2 HN21 GDP sing 112 n n N2 HN22 GDP sing 113 n n N3 C4 GDP sing 114 n n # _atom_sites.entry_id 5XDT _atom_sites.fract_transf_matrix[1][1] 0.014174 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004791 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019534 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 401 1 GDP GDP . C 3 CA A 1 402 1 CA CA . D 4 ZI7 A 1 403 1 ZI7 ZI7 . E 5 MB3 A 1 404 1 MB3 MB3 . F 5 MB3 A 1 405 2 MB3 MB3 . G 6 HOH A 1 501 368 HOH HOH . G 6 HOH A 2 502 363 HOH HOH . G 6 HOH A 3 503 383 HOH HOH . G 6 HOH A 4 504 58 HOH HOH . G 6 HOH A 5 505 229 HOH HOH . G 6 HOH A 6 506 413 HOH HOH . G 6 HOH A 7 507 370 HOH HOH . G 6 HOH A 8 508 414 HOH HOH . G 6 HOH A 9 509 337 HOH HOH . G 6 HOH A 10 510 235 HOH HOH . G 6 HOH A 11 511 222 HOH HOH . G 6 HOH A 12 512 380 HOH HOH . G 6 HOH A 13 513 353 HOH HOH . G 6 HOH A 14 514 233 HOH HOH . G 6 HOH A 15 515 231 HOH HOH . G 6 HOH A 16 516 236 HOH HOH . G 6 HOH A 17 517 250 HOH HOH . G 6 HOH A 18 518 311 HOH HOH . G 6 HOH A 19 519 227 HOH HOH . G 6 HOH A 20 520 224 HOH HOH . G 6 HOH A 21 521 75 HOH HOH . G 6 HOH A 22 522 394 HOH HOH . G 6 HOH A 23 523 134 HOH HOH . G 6 HOH A 24 524 34 HOH HOH . G 6 HOH A 25 525 249 HOH HOH . G 6 HOH A 26 526 189 HOH HOH . G 6 HOH A 27 527 97 HOH HOH . G 6 HOH A 28 528 7 HOH HOH . G 6 HOH A 29 529 119 HOH HOH . G 6 HOH A 30 530 367 HOH HOH . G 6 HOH A 31 531 154 HOH HOH . G 6 HOH A 32 532 162 HOH HOH . G 6 HOH A 33 533 6 HOH HOH . G 6 HOH A 34 534 136 HOH HOH . G 6 HOH A 35 535 50 HOH HOH . G 6 HOH A 36 536 402 HOH HOH . G 6 HOH A 37 537 60 HOH HOH . G 6 HOH A 38 538 192 HOH HOH . G 6 HOH A 39 539 155 HOH HOH . G 6 HOH A 40 540 221 HOH HOH . G 6 HOH A 41 541 89 HOH HOH . G 6 HOH A 42 542 417 HOH HOH . G 6 HOH A 43 543 226 HOH HOH . G 6 HOH A 44 544 88 HOH HOH . G 6 HOH A 45 545 286 HOH HOH . G 6 HOH A 46 546 36 HOH HOH . G 6 HOH A 47 547 122 HOH HOH . G 6 HOH A 48 548 53 HOH HOH . G 6 HOH A 49 549 242 HOH HOH . G 6 HOH A 50 550 180 HOH HOH . G 6 HOH A 51 551 419 HOH HOH . G 6 HOH A 52 552 72 HOH HOH . G 6 HOH A 53 553 120 HOH HOH . G 6 HOH A 54 554 87 HOH HOH . G 6 HOH A 55 555 2 HOH HOH . G 6 HOH A 56 556 37 HOH HOH . G 6 HOH A 57 557 45 HOH HOH . G 6 HOH A 58 558 115 HOH HOH . G 6 HOH A 59 559 412 HOH HOH . G 6 HOH A 60 560 21 HOH HOH . G 6 HOH A 61 561 62 HOH HOH . G 6 HOH A 62 562 331 HOH HOH . G 6 HOH A 63 563 3 HOH HOH . G 6 HOH A 64 564 116 HOH HOH . G 6 HOH A 65 565 146 HOH HOH . G 6 HOH A 66 566 306 HOH HOH . G 6 HOH A 67 567 14 HOH HOH . G 6 HOH A 68 568 238 HOH HOH . G 6 HOH A 69 569 381 HOH HOH . G 6 HOH A 70 570 278 HOH HOH . G 6 HOH A 71 571 8 HOH HOH . G 6 HOH A 72 572 177 HOH HOH . G 6 HOH A 73 573 141 HOH HOH . G 6 HOH A 74 574 410 HOH HOH . G 6 HOH A 75 575 300 HOH HOH . G 6 HOH A 76 576 246 HOH HOH . G 6 HOH A 77 577 26 HOH HOH . G 6 HOH A 78 578 252 HOH HOH . G 6 HOH A 79 579 117 HOH HOH . G 6 HOH A 80 580 150 HOH HOH . G 6 HOH A 81 581 121 HOH HOH . G 6 HOH A 82 582 181 HOH HOH . G 6 HOH A 83 583 151 HOH HOH . G 6 HOH A 84 584 5 HOH HOH . G 6 HOH A 85 585 153 HOH HOH . G 6 HOH A 86 586 207 HOH HOH . G 6 HOH A 87 587 270 HOH HOH . G 6 HOH A 88 588 205 HOH HOH . G 6 HOH A 89 589 112 HOH HOH . G 6 HOH A 90 590 77 HOH HOH . G 6 HOH A 91 591 273 HOH HOH . G 6 HOH A 92 592 240 HOH HOH . G 6 HOH A 93 593 25 HOH HOH . G 6 HOH A 94 594 38 HOH HOH . G 6 HOH A 95 595 232 HOH HOH . G 6 HOH A 96 596 327 HOH HOH . G 6 HOH A 97 597 23 HOH HOH . G 6 HOH A 98 598 374 HOH HOH . G 6 HOH A 99 599 48 HOH HOH . G 6 HOH A 100 600 33 HOH HOH . G 6 HOH A 101 601 15 HOH HOH . G 6 HOH A 102 602 13 HOH HOH . G 6 HOH A 103 603 132 HOH HOH . G 6 HOH A 104 604 35 HOH HOH . G 6 HOH A 105 605 415 HOH HOH . G 6 HOH A 106 606 171 HOH HOH . G 6 HOH A 107 607 83 HOH HOH . G 6 HOH A 108 608 149 HOH HOH . G 6 HOH A 109 609 241 HOH HOH . G 6 HOH A 110 610 90 HOH HOH . G 6 HOH A 111 611 137 HOH HOH . G 6 HOH A 112 612 54 HOH HOH . G 6 HOH A 113 613 56 HOH HOH . G 6 HOH A 114 614 61 HOH HOH . G 6 HOH A 115 615 82 HOH HOH . G 6 HOH A 116 616 128 HOH HOH . G 6 HOH A 117 617 74 HOH HOH . G 6 HOH A 118 618 125 HOH HOH . G 6 HOH A 119 619 106 HOH HOH . G 6 HOH A 120 620 225 HOH HOH . G 6 HOH A 121 621 98 HOH HOH . G 6 HOH A 122 622 237 HOH HOH . G 6 HOH A 123 623 78 HOH HOH . G 6 HOH A 124 624 19 HOH HOH . G 6 HOH A 125 625 176 HOH HOH . G 6 HOH A 126 626 92 HOH HOH . G 6 HOH A 127 627 114 HOH HOH . G 6 HOH A 128 628 59 HOH HOH . G 6 HOH A 129 629 41 HOH HOH . G 6 HOH A 130 630 201 HOH HOH . G 6 HOH A 131 631 259 HOH HOH . G 6 HOH A 132 632 47 HOH HOH . G 6 HOH A 133 633 28 HOH HOH . G 6 HOH A 134 634 197 HOH HOH . G 6 HOH A 135 635 31 HOH HOH . G 6 HOH A 136 636 20 HOH HOH . G 6 HOH A 137 637 369 HOH HOH . G 6 HOH A 138 638 399 HOH HOH . G 6 HOH A 139 639 212 HOH HOH . G 6 HOH A 140 640 52 HOH HOH . G 6 HOH A 141 641 416 HOH HOH . G 6 HOH A 142 642 336 HOH HOH . G 6 HOH A 143 643 39 HOH HOH . G 6 HOH A 144 644 9 HOH HOH . G 6 HOH A 145 645 67 HOH HOH . G 6 HOH A 146 646 260 HOH HOH . G 6 HOH A 147 647 267 HOH HOH . G 6 HOH A 148 648 178 HOH HOH . G 6 HOH A 149 649 230 HOH HOH . G 6 HOH A 150 650 57 HOH HOH . G 6 HOH A 151 651 195 HOH HOH . G 6 HOH A 152 652 101 HOH HOH . G 6 HOH A 153 653 372 HOH HOH . G 6 HOH A 154 654 341 HOH HOH . G 6 HOH A 155 655 202 HOH HOH . G 6 HOH A 156 656 182 HOH HOH . G 6 HOH A 157 657 51 HOH HOH . G 6 HOH A 158 658 24 HOH HOH . G 6 HOH A 159 659 179 HOH HOH . G 6 HOH A 160 660 17 HOH HOH . G 6 HOH A 161 661 43 HOH HOH . G 6 HOH A 162 662 93 HOH HOH . G 6 HOH A 163 663 281 HOH HOH . G 6 HOH A 164 664 373 HOH HOH . G 6 HOH A 165 665 423 HOH HOH . G 6 HOH A 166 666 102 HOH HOH . G 6 HOH A 167 667 105 HOH HOH . G 6 HOH A 168 668 206 HOH HOH . G 6 HOH A 169 669 397 HOH HOH . G 6 HOH A 170 670 159 HOH HOH . G 6 HOH A 171 671 405 HOH HOH . G 6 HOH A 172 672 16 HOH HOH . G 6 HOH A 173 673 95 HOH HOH . G 6 HOH A 174 674 173 HOH HOH . G 6 HOH A 175 675 420 HOH HOH . G 6 HOH A 176 676 135 HOH HOH . G 6 HOH A 177 677 94 HOH HOH . G 6 HOH A 178 678 142 HOH HOH . G 6 HOH A 179 679 70 HOH HOH . G 6 HOH A 180 680 113 HOH HOH . G 6 HOH A 181 681 49 HOH HOH . G 6 HOH A 182 682 27 HOH HOH . G 6 HOH A 183 683 131 HOH HOH . G 6 HOH A 184 684 357 HOH HOH . G 6 HOH A 185 685 110 HOH HOH . G 6 HOH A 186 686 10 HOH HOH . G 6 HOH A 187 687 364 HOH HOH . G 6 HOH A 188 688 4 HOH HOH . G 6 HOH A 189 689 169 HOH HOH . G 6 HOH A 190 690 91 HOH HOH . G 6 HOH A 191 691 22 HOH HOH . G 6 HOH A 192 692 71 HOH HOH . G 6 HOH A 193 693 255 HOH HOH . G 6 HOH A 194 694 99 HOH HOH . G 6 HOH A 195 695 103 HOH HOH . G 6 HOH A 196 696 283 HOH HOH . G 6 HOH A 197 697 133 HOH HOH . G 6 HOH A 198 698 302 HOH HOH . G 6 HOH A 199 699 275 HOH HOH . G 6 HOH A 200 700 261 HOH HOH . G 6 HOH A 201 701 80 HOH HOH . G 6 HOH A 202 702 65 HOH HOH . G 6 HOH A 203 703 12 HOH HOH . G 6 HOH A 204 704 298 HOH HOH . G 6 HOH A 205 705 79 HOH HOH . G 6 HOH A 206 706 108 HOH HOH . G 6 HOH A 207 707 55 HOH HOH . G 6 HOH A 208 708 140 HOH HOH . G 6 HOH A 209 709 239 HOH HOH . G 6 HOH A 210 710 130 HOH HOH . G 6 HOH A 211 711 18 HOH HOH . G 6 HOH A 212 712 32 HOH HOH . G 6 HOH A 213 713 30 HOH HOH . G 6 HOH A 214 714 163 HOH HOH . G 6 HOH A 215 715 144 HOH HOH . G 6 HOH A 216 716 139 HOH HOH . G 6 HOH A 217 717 418 HOH HOH . G 6 HOH A 218 718 111 HOH HOH . G 6 HOH A 219 719 304 HOH HOH . G 6 HOH A 220 720 411 HOH HOH . G 6 HOH A 221 721 148 HOH HOH . G 6 HOH A 222 722 210 HOH HOH . G 6 HOH A 223 723 307 HOH HOH . G 6 HOH A 224 724 63 HOH HOH . G 6 HOH A 225 725 44 HOH HOH . G 6 HOH A 226 726 73 HOH HOH . G 6 HOH A 227 727 198 HOH HOH . G 6 HOH A 228 728 126 HOH HOH . G 6 HOH A 229 729 152 HOH HOH . G 6 HOH A 230 730 299 HOH HOH . G 6 HOH A 231 731 348 HOH HOH . G 6 HOH A 232 732 42 HOH HOH . G 6 HOH A 233 733 29 HOH HOH . G 6 HOH A 234 734 104 HOH HOH . G 6 HOH A 235 735 354 HOH HOH . G 6 HOH A 236 736 11 HOH HOH . G 6 HOH A 237 737 388 HOH HOH . G 6 HOH A 238 738 220 HOH HOH . G 6 HOH A 239 739 244 HOH HOH . G 6 HOH A 240 740 160 HOH HOH . G 6 HOH A 241 741 310 HOH HOH . G 6 HOH A 242 742 40 HOH HOH . G 6 HOH A 243 743 69 HOH HOH . G 6 HOH A 244 744 157 HOH HOH . G 6 HOH A 245 745 85 HOH HOH . G 6 HOH A 246 746 223 HOH HOH . G 6 HOH A 247 747 81 HOH HOH . G 6 HOH A 248 748 379 HOH HOH . G 6 HOH A 249 749 100 HOH HOH . G 6 HOH A 250 750 284 HOH HOH . G 6 HOH A 251 751 295 HOH HOH . G 6 HOH A 252 752 395 HOH HOH . G 6 HOH A 253 753 398 HOH HOH . G 6 HOH A 254 754 167 HOH HOH . G 6 HOH A 255 755 186 HOH HOH . G 6 HOH A 256 756 164 HOH HOH . G 6 HOH A 257 757 86 HOH HOH . G 6 HOH A 258 758 296 HOH HOH . G 6 HOH A 259 759 401 HOH HOH . G 6 HOH A 260 760 217 HOH HOH . G 6 HOH A 261 761 215 HOH HOH . G 6 HOH A 262 762 396 HOH HOH . G 6 HOH A 263 763 392 HOH HOH . G 6 HOH A 264 764 253 HOH HOH . G 6 HOH A 265 765 421 HOH HOH . G 6 HOH A 266 766 359 HOH HOH . G 6 HOH A 267 767 378 HOH HOH . G 6 HOH A 268 768 389 HOH HOH . G 6 HOH A 269 769 219 HOH HOH . G 6 HOH A 270 770 355 HOH HOH . G 6 HOH A 271 771 109 HOH HOH . G 6 HOH A 272 772 385 HOH HOH . G 6 HOH A 273 773 199 HOH HOH . G 6 HOH A 274 774 268 HOH HOH . G 6 HOH A 275 775 196 HOH HOH . G 6 HOH A 276 776 185 HOH HOH . G 6 HOH A 277 777 377 HOH HOH . G 6 HOH A 278 778 214 HOH HOH . G 6 HOH A 279 779 209 HOH HOH . G 6 HOH A 280 780 282 HOH HOH . G 6 HOH A 281 781 342 HOH HOH . G 6 HOH A 282 782 46 HOH HOH . G 6 HOH A 283 783 366 HOH HOH . G 6 HOH A 284 784 365 HOH HOH . G 6 HOH A 285 785 66 HOH HOH . G 6 HOH A 286 786 170 HOH HOH . G 6 HOH A 287 787 190 HOH HOH . G 6 HOH A 288 788 387 HOH HOH . G 6 HOH A 289 789 211 HOH HOH . G 6 HOH A 290 790 194 HOH HOH . G 6 HOH A 291 791 188 HOH HOH . G 6 HOH A 292 792 375 HOH HOH . G 6 HOH A 293 793 213 HOH HOH . G 6 HOH A 294 794 172 HOH HOH . G 6 HOH A 295 795 409 HOH HOH . G 6 HOH A 296 796 123 HOH HOH . G 6 HOH A 297 797 204 HOH HOH . G 6 HOH A 298 798 96 HOH HOH . G 6 HOH A 299 799 243 HOH HOH . G 6 HOH A 300 800 145 HOH HOH . G 6 HOH A 301 801 422 HOH HOH . G 6 HOH A 302 802 362 HOH HOH . G 6 HOH A 303 803 391 HOH HOH . G 6 HOH A 304 804 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . B 2 5.814 -34.605 27.079 1 14.67 ? PB GDP 401 A 1 HETATM 2 O O1B GDP . . . B 2 6.758 -33.432 27.249 1 15.7 ? O1B GDP 401 A 1 HETATM 3 O O2B GDP . . . B 2 4.418 -34.162 27.424 1 17.3 ? O2B GDP 401 A 1 HETATM 4 O O3B GDP . . . B 2 6.263 -35.874 27.748 1 17.44 ? O3B GDP 401 A 1 HETATM 5 O O3A GDP . . . B 2 5.81 -34.944 25.507 1 14.61 ? O3A GDP 401 A 1 HETATM 6 P PA GDP . . . B 2 5.709 -33.987 24.218 1 14.87 ? PA GDP 401 A 1 HETATM 7 O O1A GDP . . . B 2 7.075 -33.613 23.754 1 16.59 ? O1A GDP 401 A 1 HETATM 8 O O2A GDP . . . B 2 4.739 -32.913 24.497 1 14.6 ? O2A GDP 401 A 1 HETATM 9 O O5' GDP . . . B 2 5.137 -34.985 23.132 1 15.27 ? O5' GDP 401 A 1 HETATM 10 C C5' GDP . . . B 2 3.811 -35.514 23.243 1 14.76 ? C5' GDP 401 A 1 HETATM 11 C C4' GDP . . . B 2 3.181 -35.506 21.858 1 14.85 ? C4' GDP 401 A 1 HETATM 12 O O4' GDP . . . B 2 2.958 -34.166 21.436 1 15.12 ? O4' GDP 401 A 1 HETATM 13 C C3' GDP . . . B 2 4.038 -36.125 20.76 1 14.9 ? C3' GDP 401 A 1 HETATM 14 O O3' GDP . . . B 2 3.868 -37.535 20.773 1 17.63 ? O3' GDP 401 A 1 HETATM 15 C C2' GDP . . . B 2 3.541 -35.438 19.494 1 14.79 ? C2' GDP 401 A 1 HETATM 16 O O2' GDP . . . B 2 2.391 -36.1 18.93 1 16.03 ? O2' GDP 401 A 1 HETATM 17 C C1' GDP . . . B 2 3.104 -34.09 19.996 1 14.75 ? C1' GDP 401 A 1 HETATM 18 N N9 GDP . . . B 2 3.971 -32.938 19.764 1 14.56 ? N9 GDP 401 A 1 HETATM 19 C C8 GDP . . . B 2 5.093 -32.665 20.458 1 14.85 ? C8 GDP 401 A 1 HETATM 20 N N7 GDP . . . B 2 5.533 -31.447 20.135 1 15.42 ? N7 GDP 401 A 1 HETATM 21 C C5 GDP . . . B 2 4.67 -30.931 19.219 1 15.54 ? C5 GDP 401 A 1 HETATM 22 C C6 GDP . . . B 2 4.511 -29.68 18.536 1 15.72 ? C6 GDP 401 A 1 HETATM 23 O O6 GDP . . . B 2 5.298 -28.721 18.699 1 17.17 ? O6 GDP 401 A 1 HETATM 24 N N1 GDP . . . B 2 3.457 -29.592 17.715 1 15.8 ? N1 GDP 401 A 1 HETATM 25 C C2 GDP . . . B 2 2.529 -30.561 17.521 1 15.25 ? C2 GDP 401 A 1 HETATM 26 N N2 GDP . . . B 2 1.537 -30.323 16.654 1 16.5 ? N2 GDP 401 A 1 HETATM 27 N N3 GDP . . . B 2 2.605 -31.755 18.132 1 14.74 ? N3 GDP 401 A 1 HETATM 28 C C4 GDP . . . B 2 3.633 -31.912 18.99 1 14.39 ? C4 GDP 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #