data_5XEJ # _model_server_result.job_id o3yQ4M_Hb77se1sz4PRs4g _model_server_result.datetime_utc '2024-11-28 13:09:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xej # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":204}' # _entry.id 5XEJ # _exptl.entry_id 5XEJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 454.439 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{R})-2-[[4-[[2,4-bis(azanyl)pteridin-6-yl]methyl-methyl-amino]phenyl]carbonylamino]pentanedioic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5XEJ _cell.length_a 95.758 _cell.length_b 95.758 _cell.length_c 104.154 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XEJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H22 N8 O5' _chem_comp.formula_weight 454.439 _chem_comp.id 6UV _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{R})-2-[[4-[[2,4-bis(azanyl)pteridin-6-yl]methyl-methyl-amino]phenyl]carbonylamino]pentanedioic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OE1 CD 6UV doub 1 n n OE2 CD 6UV sing 2 n n CD CG 6UV sing 3 n n O2 CT 6UV doub 4 n n CG CB 6UV sing 5 n n CT O1 6UV sing 6 n n CT CA 6UV sing 7 n n CB CA 6UV sing 8 n n CA N 6UV sing 9 n n N8 C7 6UV doub 10 n y N8 C8A 6UV sing 11 n y C7 C6 6UV sing 12 n y N1 C8A 6UV doub 13 n y N1 C2 6UV sing 14 n y C8A C4A 6UV sing 15 n y NA2 C2 6UV sing 16 n n N C 6UV sing 17 n n C2 N3 6UV doub 18 n y C6 C9 6UV sing 19 n n C6 N5 6UV doub 20 n y C9 N10 6UV sing 21 n n C4A N5 6UV sing 22 n y C4A C4 6UV doub 23 n y N3 C4 6UV sing 24 n y C4 NA4 6UV sing 25 n n C12 C13 6UV doub 26 n y C12 C11 6UV sing 27 n y C13 C14 6UV sing 28 n y C C11 6UV sing 29 n n C O 6UV doub 30 n n C11 C16 6UV doub 31 n y C14 N10 6UV sing 32 n n C14 C15 6UV doub 33 n y N10 CM 6UV sing 34 n n C16 C15 6UV sing 35 n y NA2 H1 6UV sing 36 n n NA2 H2 6UV sing 37 n n NA4 H3 6UV sing 38 n n NA4 H4 6UV sing 39 n n C7 H5 6UV sing 40 n n C9 H6 6UV sing 41 n n C9 H7 6UV sing 42 n n CM H8 6UV sing 43 n n CM H9 6UV sing 44 n n CM H10 6UV sing 45 n n C12 H11 6UV sing 46 n n C13 H12 6UV sing 47 n n C15 H13 6UV sing 48 n n C16 H14 6UV sing 49 n n N H15 6UV sing 50 n n CA H16 6UV sing 51 n n O1 H17 6UV sing 52 n n CB H18 6UV sing 53 n n CB H19 6UV sing 54 n n CG H20 6UV sing 55 n n CG H21 6UV sing 56 n n OE2 H22 6UV sing 57 n n # _atom_sites.entry_id 5XEJ _atom_sites.fract_transf_matrix[1][1] 0.010443 _atom_sites.fract_transf_matrix[1][2] 0.006029 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009601 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 201 202 SO4 SO4 . E 2 SO4 A 1 202 203 SO4 SO4 . F 2 SO4 A 1 203 204 SO4 SO4 . G 3 6UV A 1 204 205 6UV 6UV . H 2 SO4 C 1 201 201 SO4 SO4 . I 4 HOH A 1 301 303 HOH HOH . I 4 HOH A 2 302 302 HOH HOH . I 4 HOH A 3 303 304 HOH HOH . I 4 HOH A 4 304 309 HOH HOH . I 4 HOH A 5 305 301 HOH HOH . I 4 HOH A 6 306 307 HOH HOH . I 4 HOH A 7 307 305 HOH HOH . I 4 HOH A 8 308 308 HOH HOH . I 4 HOH A 9 309 306 HOH HOH . I 4 HOH A 10 310 312 HOH HOH . I 4 HOH A 11 311 311 HOH HOH . I 4 HOH A 12 312 314 HOH HOH . I 4 HOH A 13 313 205 HOH HOH . I 4 HOH A 14 314 313 HOH HOH . I 4 HOH A 15 315 316 HOH HOH . I 4 HOH A 16 316 315 HOH HOH . I 4 HOH A 17 317 317 HOH HOH . I 4 HOH A 18 318 319 HOH HOH . I 4 HOH A 19 319 318 HOH HOH . I 4 HOH A 20 320 323 HOH HOH . I 4 HOH A 21 321 321 HOH HOH . I 4 HOH A 22 322 320 HOH HOH . I 4 HOH A 23 323 322 HOH HOH . J 4 HOH B 1 201 201 HOH HOH . J 4 HOH B 2 202 202 HOH HOH . J 4 HOH B 3 203 203 HOH HOH . J 4 HOH B 4 204 203 HOH HOH . J 4 HOH B 5 205 310 HOH HOH . J 4 HOH B 6 206 204 HOH HOH . J 4 HOH B 7 207 205 HOH HOH . J 4 HOH B 8 208 206 HOH HOH . J 4 HOH B 9 209 207 HOH HOH . J 4 HOH B 10 210 211 HOH HOH . J 4 HOH B 11 211 209 HOH HOH . J 4 HOH B 12 212 208 HOH HOH . J 4 HOH B 13 213 210 HOH HOH . J 4 HOH B 14 214 212 HOH HOH . J 4 HOH B 15 215 213 HOH HOH . K 4 HOH C 1 301 207 HOH HOH . K 4 HOH C 2 302 204 HOH HOH . K 4 HOH C 3 303 201 HOH HOH . K 4 HOH C 4 304 202 HOH HOH . K 4 HOH C 5 305 206 HOH HOH . K 4 HOH C 6 306 208 HOH HOH . K 4 HOH C 7 307 210 HOH HOH . K 4 HOH C 8 308 209 HOH HOH . K 4 HOH C 9 309 211 HOH HOH . K 4 HOH C 10 310 212 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 6UV . . . G 3 57.002 -26.852 -2.632 0.5 40.52 ? N1 6UV 204 A 1 HETATM 2 C C2 6UV . . . G 3 57.998 -27.73 -2.412 0.5 38.93 ? C2 6UV 204 A 1 HETATM 3 N NA2 6UV . . . G 3 59.282 -27.337 -2.564 0.5 38.27 ? NA2 6UV 204 A 1 HETATM 4 N N3 6UV . . . G 3 57.759 -28.996 -2.022 0.5 38.47 ? N3 6UV 204 A 1 HETATM 5 C C4 6UV . . . G 3 56.519 -29.452 -1.827 0.5 37.83 ? C4 6UV 204 A 1 HETATM 6 N NA4 6UV . . . G 3 56.362 -30.722 -1.436 0.5 37.29 ? NA4 6UV 204 A 1 HETATM 7 C C4A 6UV . . . G 3 55.359 -28.573 -2.072 0.5 38.56 ? C4A 6UV 204 A 1 HETATM 8 N N5 6UV . . . G 3 54.066 -28.963 -1.917 0.5 39.35 ? N5 6UV 204 A 1 HETATM 9 C C6 6UV . . . G 3 53.095 -28.024 -2.126 0.5 42.39 ? C6 6UV 204 A 1 HETATM 10 C C7 6UV . . . G 3 53.428 -26.722 -2.547 0.5 41.45 ? C7 6UV 204 A 1 HETATM 11 N N8 6UV . . . G 3 54.689 -26.297 -2.722 0.5 38.05 ? N8 6UV 204 A 1 HETATM 12 C C8A 6UV . . . G 3 55.691 -27.187 -2.49 0.5 42.05 ? C8A 6UV 204 A 1 HETATM 13 C C9 6UV . . . G 3 51.618 -28.336 -1.961 0.5 40.68 ? C9 6UV 204 A 1 HETATM 14 N N10 6UV . . . G 3 51.044 -28.47 -0.606 0.5 41.87 ? N10 6UV 204 A 1 HETATM 15 C CM 6UV . . . G 3 51.286 -27.62 0.555 0.5 40.94 ? CM 6UV 204 A 1 HETATM 16 C C11 6UV . . . G 3 49.073 -32.089 -0.89 0.5 42.98 ? C11 6UV 204 A 1 HETATM 17 C C12 6UV . . . G 3 48.378 -31.102 -0.179 0.5 41.29 ? C12 6UV 204 A 1 HETATM 18 C C13 6UV . . . G 3 48.952 -29.821 -0.035 0.5 41.2 ? C13 6UV 204 A 1 HETATM 19 C C14 6UV . . . G 3 50.236 -29.594 -0.557 0.5 42.08 ? C14 6UV 204 A 1 HETATM 20 C C15 6UV . . . G 3 50.903 -30.566 -1.225 0.5 42.95 ? C15 6UV 204 A 1 HETATM 21 C C16 6UV . . . G 3 50.335 -31.789 -1.357 0.5 43.91 ? C16 6UV 204 A 1 HETATM 22 C C 6UV . . . G 3 48.761 -33.546 -1.207 1 49.31 ? C 6UV 204 A 1 HETATM 23 O O 6UV . . . G 3 49.551 -34.215 -0.588 1 62.7 ? O 6UV 204 A 1 HETATM 24 N N 6UV . . . G 3 47.97 -34.272 -2.101 1 53.05 ? N 6UV 204 A 1 HETATM 25 C CA 6UV . . . G 3 46.872 -33.916 -3.07 1 55.69 ? CA 6UV 204 A 1 HETATM 26 C CT 6UV . . . G 3 47.376 -32.834 -3.984 1 59.37 ? CT 6UV 204 A 1 HETATM 27 O O1 6UV . . . G 3 48.296 -32.065 -3.568 1 60.77 ? O1 6UV 204 A 1 HETATM 28 O O2 6UV . . . G 3 46.808 -32.743 -5.108 1 50.17 ? O2 6UV 204 A 1 HETATM 29 C CB 6UV . . . G 3 46.082 -35.047 -3.878 1 47.9 ? CB 6UV 204 A 1 HETATM 30 C CG 6UV . . . G 3 45 -34.55 -4.928 1 41.49 ? CG 6UV 204 A 1 HETATM 31 C CD 6UV . . . G 3 43.816 -35.42 -5.434 1 43.92 ? CD 6UV 204 A 1 HETATM 32 O OE1 6UV . . . G 3 42.69 -34.958 -5.793 1 39.72 ? OE1 6UV 204 A 1 HETATM 33 O OE2 6UV . . . G 3 43.929 -36.644 -5.573 1 48.86 ? OE2 6UV 204 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #