data_5XGA # _model_server_result.job_id WqKyO5VyAa-6ICxQDOtGMQ _model_server_result.datetime_utc '2025-03-30 08:59:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xga # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5XGA # _exptl.entry_id 5XGA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XGA _cell.length_a 43.654 _cell.length_b 45.214 _cell.length_c 70.721 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XGA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 5XGA _atom_sites.fract_transf_matrix[1][1] 0.022907 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01414 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CPS A 1 201 2647 CPS CPS . C 2 CPS A 1 202 2648 CPS CPS . D 3 ACY A 1 203 1 ACY ACY . E 4 HOH A 1 301 39 HOH HOH . E 4 HOH A 2 302 76 HOH HOH . E 4 HOH A 3 303 22 HOH HOH . E 4 HOH A 4 304 25 HOH HOH . E 4 HOH A 5 305 6 HOH HOH . E 4 HOH A 6 306 11 HOH HOH . E 4 HOH A 7 307 10 HOH HOH . E 4 HOH A 8 308 32 HOH HOH . E 4 HOH A 9 309 3 HOH HOH . E 4 HOH A 10 310 15 HOH HOH . E 4 HOH A 11 311 43 HOH HOH . E 4 HOH A 12 312 1 HOH HOH . E 4 HOH A 13 313 5 HOH HOH . E 4 HOH A 14 314 28 HOH HOH . E 4 HOH A 15 315 14 HOH HOH . E 4 HOH A 16 316 17 HOH HOH . E 4 HOH A 17 317 24 HOH HOH . E 4 HOH A 18 318 4 HOH HOH . E 4 HOH A 19 319 12 HOH HOH . E 4 HOH A 20 320 7 HOH HOH . E 4 HOH A 21 321 16 HOH HOH . E 4 HOH A 22 322 35 HOH HOH . E 4 HOH A 23 323 2 HOH HOH . E 4 HOH A 24 324 8 HOH HOH . E 4 HOH A 25 325 29 HOH HOH . E 4 HOH A 26 326 13 HOH HOH . E 4 HOH A 27 327 61 HOH HOH . E 4 HOH A 28 328 82 HOH HOH . E 4 HOH A 29 329 53 HOH HOH . E 4 HOH A 30 330 75 HOH HOH . E 4 HOH A 31 331 9 HOH HOH . E 4 HOH A 32 332 85 HOH HOH . E 4 HOH A 33 333 44 HOH HOH . E 4 HOH A 34 334 46 HOH HOH . E 4 HOH A 35 335 20 HOH HOH . E 4 HOH A 36 336 59 HOH HOH . E 4 HOH A 37 337 51 HOH HOH . E 4 HOH A 38 338 27 HOH HOH . E 4 HOH A 39 339 83 HOH HOH . E 4 HOH A 40 340 38 HOH HOH . E 4 HOH A 41 341 65 HOH HOH . E 4 HOH A 42 342 77 HOH HOH . E 4 HOH A 43 343 37 HOH HOH . E 4 HOH A 44 344 89 HOH HOH . E 4 HOH A 45 345 81 HOH HOH . E 4 HOH A 46 346 33 HOH HOH . E 4 HOH A 47 347 64 HOH HOH . E 4 HOH A 48 348 54 HOH HOH . E 4 HOH A 49 349 72 HOH HOH . E 4 HOH A 50 350 18 HOH HOH . E 4 HOH A 51 351 79 HOH HOH . E 4 HOH A 52 352 73 HOH HOH . E 4 HOH A 53 353 78 HOH HOH . E 4 HOH A 54 354 26 HOH HOH . E 4 HOH A 55 355 40 HOH HOH . E 4 HOH A 56 356 74 HOH HOH . E 4 HOH A 57 357 86 HOH HOH . E 4 HOH A 58 358 42 HOH HOH . E 4 HOH A 59 359 84 HOH HOH . E 4 HOH A 60 360 88 HOH HOH . E 4 HOH A 61 361 30 HOH HOH . E 4 HOH A 62 362 49 HOH HOH . E 4 HOH A 63 363 70 HOH HOH . E 4 HOH A 64 364 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . D 3 -2.19 2.949 -12.408 1 54.34 ? C ACY 203 A 1 HETATM 2 O O ACY . . . D 3 -2.446 2.567 -13.573 1 52.88 ? O ACY 203 A 1 HETATM 3 O OXT ACY . . . D 3 -2.985 2.723 -11.519 1 58.7 ? OXT ACY 203 A 1 HETATM 4 C CH3 ACY . . . D 3 -0.925 3.678 -12.035 1 51.92 ? CH3 ACY 203 A 1 HETATM 5 H H1 ACY . . . D 3 -0.228 3.62 -12.828 1 62.31 ? H1 ACY 203 A 1 HETATM 6 H H2 ACY . . . D 3 -0.508 3.237 -11.171 1 62.31 ? H2 ACY 203 A 1 HETATM 7 H H3 ACY . . . D 3 -1.145 4.688 -11.828 1 62.31 ? H3 ACY 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 7 #