data_5XGI # _model_server_result.job_id FX-spOljK1dz-effIWjQlw _model_server_result.datetime_utc '2024-11-22 05:33:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xgi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 5XGI # _exptl.entry_id 5XGI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.389 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-azanyl-5-(4-morpholin-4-ylthieno[3,2-d]pyrimidin-2-yl)phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XGI _cell.length_a 71.348 _cell.length_b 135.825 _cell.length_c 150.245 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XGI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H16 N4 O2 S' _chem_comp.formula_weight 328.389 _chem_comp.id 84R _chem_comp.mon_nstd_flag . _chem_comp.name 3-azanyl-5-(4-morpholin-4-ylthieno[3,2-d]pyrimidin-2-yl)phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N37 C31 84R sing 1 n n C31 C32 84R doub 2 n y C31 C29 84R sing 3 n y C32 C34 84R sing 4 n y C29 C26 84R doub 5 n y C34 O35 84R sing 6 n n C34 C27 84R doub 7 n y C26 C27 84R sing 8 n y C26 C19 84R sing 9 n n N18 C19 84R doub 10 n y N18 C17 84R sing 11 n y C19 N20 84R sing 12 n y C21 C17 84R sing 13 n y C21 C23 84R doub 14 n y C17 C16 84R doub 15 n y N20 C15 84R doub 16 n y C23 S25 84R sing 17 n y C16 C15 84R sing 18 n y C16 S25 84R sing 19 n y C15 N08 84R sing 20 n n N08 C09 84R sing 21 n n N08 C05 84R sing 22 n n C09 C12 84R sing 23 n n C05 C02 84R sing 24 n n C12 O01 84R sing 25 n n C02 O01 84R sing 26 n n C32 H1 84R sing 27 n n C21 H2 84R sing 28 n n C02 H3 84R sing 29 n n C02 H4 84R sing 30 n n C05 H5 84R sing 31 n n C05 H6 84R sing 32 n n C09 H7 84R sing 33 n n C09 H8 84R sing 34 n n C12 H9 84R sing 35 n n C12 H10 84R sing 36 n n C23 H11 84R sing 37 n n C27 H12 84R sing 38 n n C29 H13 84R sing 39 n n O35 H14 84R sing 40 n n N37 H15 84R sing 41 n n N37 H16 84R sing 42 n n # _atom_sites.entry_id 5XGI _atom_sites.fract_transf_matrix[1][1] 0.014016 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007362 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 84R A 1 1101 1 84R C16 . D 4 P6G A 1 1102 1 P6G P6G . E 5 SO4 A 1 1103 3 SO4 SO4 . F 6 GOL A 1 1104 5 GOL GOL . G 6 GOL A 1 1105 1 GOL GOL . H 5 SO4 B 1 601 2 SO4 SO4 . I 5 SO4 B 1 602 4 SO4 SO4 . J 7 HOH A 1 1201 48 HOH HOH . J 7 HOH A 2 1202 53 HOH HOH . J 7 HOH A 3 1203 85 HOH HOH . J 7 HOH A 4 1204 5 HOH HOH . J 7 HOH A 5 1205 30 HOH HOH . J 7 HOH A 6 1206 1 HOH HOH . J 7 HOH A 7 1207 64 HOH HOH . J 7 HOH A 8 1208 21 HOH HOH . J 7 HOH A 9 1209 6 HOH HOH . J 7 HOH A 10 1210 83 HOH HOH . J 7 HOH A 11 1211 15 HOH HOH . J 7 HOH A 12 1212 35 HOH HOH . J 7 HOH A 13 1213 18 HOH HOH . J 7 HOH A 14 1214 14 HOH HOH . J 7 HOH A 15 1215 37 HOH HOH . J 7 HOH A 16 1216 49 HOH HOH . J 7 HOH A 17 1217 40 HOH HOH . J 7 HOH A 18 1218 32 HOH HOH . J 7 HOH A 19 1219 2 HOH HOH . J 7 HOH A 20 1220 75 HOH HOH . J 7 HOH A 21 1221 87 HOH HOH . J 7 HOH A 22 1222 3 HOH HOH . J 7 HOH A 23 1223 78 HOH HOH . J 7 HOH A 24 1224 19 HOH HOH . J 7 HOH A 25 1225 98 HOH HOH . J 7 HOH A 26 1226 7 HOH HOH . J 7 HOH A 27 1227 65 HOH HOH . J 7 HOH A 28 1228 99 HOH HOH . J 7 HOH A 29 1229 52 HOH HOH . J 7 HOH A 30 1230 31 HOH HOH . J 7 HOH A 31 1231 70 HOH HOH . J 7 HOH A 32 1232 79 HOH HOH . J 7 HOH A 33 1233 38 HOH HOH . J 7 HOH A 34 1234 97 HOH HOH . J 7 HOH A 35 1235 34 HOH HOH . J 7 HOH A 36 1236 26 HOH HOH . J 7 HOH A 37 1237 102 HOH HOH . J 7 HOH A 38 1238 12 HOH HOH . J 7 HOH A 39 1239 8 HOH HOH . J 7 HOH A 40 1240 100 HOH HOH . J 7 HOH A 41 1241 22 HOH HOH . J 7 HOH A 42 1242 25 HOH HOH . J 7 HOH A 43 1243 11 HOH HOH . J 7 HOH A 44 1244 42 HOH HOH . J 7 HOH A 45 1245 68 HOH HOH . J 7 HOH A 46 1246 91 HOH HOH . J 7 HOH A 47 1247 28 HOH HOH . J 7 HOH A 48 1248 81 HOH HOH . J 7 HOH A 49 1249 36 HOH HOH . J 7 HOH A 50 1250 46 HOH HOH . J 7 HOH A 51 1251 41 HOH HOH . J 7 HOH A 52 1252 27 HOH HOH . J 7 HOH A 53 1253 88 HOH HOH . J 7 HOH A 54 1254 39 HOH HOH . J 7 HOH A 55 1255 67 HOH HOH . J 7 HOH A 56 1256 74 HOH HOH . J 7 HOH A 57 1257 61 HOH HOH . J 7 HOH A 58 1258 96 HOH HOH . J 7 HOH A 59 1259 29 HOH HOH . J 7 HOH A 60 1260 45 HOH HOH . J 7 HOH A 61 1261 76 HOH HOH . J 7 HOH A 62 1262 55 HOH HOH . J 7 HOH A 63 1263 44 HOH HOH . J 7 HOH A 64 1264 58 HOH HOH . J 7 HOH A 65 1265 23 HOH HOH . J 7 HOH A 66 1266 63 HOH HOH . J 7 HOH A 67 1267 62 HOH HOH . J 7 HOH A 68 1268 50 HOH HOH . J 7 HOH A 69 1269 86 HOH HOH . J 7 HOH A 70 1270 82 HOH HOH . J 7 HOH A 71 1271 84 HOH HOH . J 7 HOH A 72 1272 72 HOH HOH . J 7 HOH A 73 1273 56 HOH HOH . J 7 HOH A 74 1274 10 HOH HOH . J 7 HOH A 75 1275 57 HOH HOH . J 7 HOH A 76 1276 9 HOH HOH . J 7 HOH A 77 1277 73 HOH HOH . J 7 HOH A 78 1278 89 HOH HOH . J 7 HOH A 79 1279 54 HOH HOH . J 7 HOH A 80 1280 47 HOH HOH . J 7 HOH A 81 1281 95 HOH HOH . J 7 HOH A 82 1282 80 HOH HOH . J 7 HOH A 83 1283 101 HOH HOH . J 7 HOH A 84 1284 51 HOH HOH . K 7 HOH B 1 701 94 HOH HOH . K 7 HOH B 2 702 20 HOH HOH . K 7 HOH B 3 703 33 HOH HOH . K 7 HOH B 4 704 66 HOH HOH . K 7 HOH B 5 705 90 HOH HOH . K 7 HOH B 6 706 17 HOH HOH . K 7 HOH B 7 707 13 HOH HOH . K 7 HOH B 8 708 24 HOH HOH . K 7 HOH B 9 709 92 HOH HOH . K 7 HOH B 10 710 77 HOH HOH . K 7 HOH B 11 711 4 HOH HOH . K 7 HOH B 12 712 71 HOH HOH . K 7 HOH B 13 713 43 HOH HOH . K 7 HOH B 14 714 60 HOH HOH . K 7 HOH B 15 715 69 HOH HOH . K 7 HOH B 16 716 103 HOH HOH . K 7 HOH B 17 717 59 HOH HOH . K 7 HOH B 18 718 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C32 84R . . . C 3 30.172 42.81 37.621 1 46.93 ? C32 84R 1101 A 1 HETATM 2 C C34 84R . . . C 3 29.806 42.665 38.957 1 47.15 ? C34 84R 1101 A 1 HETATM 3 C C26 84R . . . C 3 31.25 44.536 39.614 1 47.96 ? C26 84R 1101 A 1 HETATM 4 C C21 84R . . . C 3 34.531 47.656 41.48 1 49.92 ? C21 84R 1101 A 1 HETATM 5 C C15 84R . . . C 3 31.498 46.12 42.959 1 49.78 ? C15 84R 1101 A 1 HETATM 6 O O01 84R . . . C 3 29.341 45.532 46.529 1 52.04 ? O01 84R 1101 A 1 HETATM 7 C C02 84R . . . C 3 30.464 46.413 46.468 1 51.67 ? C02 84R 1101 A 1 HETATM 8 C C05 84R . . . C 3 30.508 47.071 45.095 1 51.68 ? C05 84R 1101 A 1 HETATM 9 N N08 84R . . . C 3 30.689 46.015 44.099 1 51 ? N08 84R 1101 A 1 HETATM 10 C C09 84R . . . C 3 29.621 44.996 44.156 1 50.54 ? C09 84R 1101 A 1 HETATM 11 C C12 84R . . . C 3 29.464 44.466 45.576 1 51.43 ? C12 84R 1101 A 1 HETATM 12 C C16 84R . . . C 3 32.691 46.888 42.765 1 49.98 ? C16 84R 1101 A 1 HETATM 13 C C17 84R . . . C 3 33.357 46.843 41.52 1 49.72 ? C17 84R 1101 A 1 HETATM 14 N N18 84R . . . C 3 32.931 46.099 40.461 1 48.45 ? N18 84R 1101 A 1 HETATM 15 C C19 84R . . . C 3 31.804 45.399 40.683 1 48.71 ? C19 84R 1101 A 1 HETATM 16 N N20 84R . . . C 3 31.125 45.402 41.851 1 48.08 ? N20 84R 1101 A 1 HETATM 17 C C23 84R . . . C 3 34.757 48.308 42.663 1 50.04 ? C23 84R 1101 A 1 HETATM 18 S S25 84R . . . C 3 33.57 47.943 43.824 1 50.56 ? S25 84R 1101 A 1 HETATM 19 C C27 84R . . . C 3 30.338 43.502 39.934 1 47.81 ? C27 84R 1101 A 1 HETATM 20 C C29 84R . . . C 3 31.612 44.66 38.249 1 47.76 ? C29 84R 1101 A 1 HETATM 21 C C31 84R . . . C 3 31.079 43.811 37.257 1 47.72 ? C31 84R 1101 A 1 HETATM 22 O O35 84R . . . C 3 28.932 41.71 39.398 1 47.82 ? O35 84R 1101 A 1 HETATM 23 N N37 84R . . . C 3 31.449 43.965 35.93 1 48.71 ? N37 84R 1101 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 23 #