data_5XGJ
#
_model_server_result.job_id            7lZ3kDkLGqgnsvyUb71jsg 
_model_server_result.datetime_utc      '2025-01-10 10:40:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5xgj 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1101}' 
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_entry.id    5XGJ 
#
_exptl.entry_id    5XGJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              402.446 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-(4-morpholin-4-ylfuro[3,2-d]pyrimidin-2-yl)-5-[(phenylmethyl)amino]phenol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5XGJ 
_cell.length_a            69.877 
_cell.length_b            136.368 
_cell.length_c            149.028 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5XGJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H22 N4 O3' 
_chem_comp.formula_weight    402.446 
_chem_comp.id                84X 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-(4-morpholin-4-ylfuro[3,2-d]pyrimidin-2-yl)-5-[(phenylmethyl)amino]phenol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C39 C42 84X sing 1 n n 
C39 N37 84X sing 2 n n 
C42 C51 84X doub 3 n y 
C42 C43 84X sing 4 n y 
N37 C31 84X sing 5 n n 
C51 C49 84X sing 6 n y 
C43 C45 84X doub 7 n y 
C49 C47 84X doub 8 n y 
C45 C47 84X sing 9 n y 
C31 C32 84X doub 10 n y 
C31 C29 84X sing 11 n y 
C32 C34 84X sing 12 n y 
C29 C26 84X doub 13 n y 
C34 O35 84X sing 14 n n 
C34 C27 84X doub 15 n y 
C26 C27 84X sing 16 n y 
C26 C19 84X sing 17 n n 
N18 C19 84X doub 18 n y 
N18 C17 84X sing 19 n y 
C19 N20 84X sing 20 n y 
C17 C21 84X sing 21 n y 
C17 C16 84X doub 22 n y 
C21 C23 84X doub 23 n y 
N20 C15 84X doub 24 n y 
C16 C15 84X sing 25 n y 
C16 O25 84X sing 26 n y 
C23 O25 84X sing 27 n y 
C15 N08 84X sing 28 n n 
N08 C05 84X sing 29 n n 
N08 C09 84X sing 30 n n 
C05 C02 84X sing 31 n n 
C09 C12 84X sing 32 n n 
C02 O01 84X sing 33 n n 
C12 O01 84X sing 34 n n 
C12 H1 84X sing 35 n n 
C12 H2 84X sing 36 n n 
C02 H3 84X sing 37 n n 
C02 H4 84X sing 38 n n 
C05 H5 84X sing 39 n n 
C05 H6 84X sing 40 n n 
C09 H7 84X sing 41 n n 
C09 H8 84X sing 42 n n 
C21 H9 84X sing 43 n n 
C23 H10 84X sing 44 n n 
C27 H11 84X sing 45 n n 
C29 H12 84X sing 46 n n 
C32 H13 84X sing 47 n n 
O35 H14 84X sing 48 n n 
N37 H15 84X sing 49 n n 
C39 H16 84X sing 50 n n 
C39 H17 84X sing 51 n n 
C43 H18 84X sing 52 n n 
C45 H19 84X sing 53 n n 
C47 H20 84X sing 54 n n 
C49 H21 84X sing 55 n n 
C51 H22 84X sing 56 n n 
#
_atom_sites.entry_id                     5XGJ 
_atom_sites.fract_transf_matrix[1][1]    0.014311 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007333 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 84X A 1 1101 1 84X C15 . 
D 4 SO4 B 1 601 1 SO4 SO4 . 
E 5 HOH A 1 1201 8 HOH HOH . 
E 5 HOH A 2 1202 12 HOH HOH . 
E 5 HOH A 3 1203 1 HOH HOH . 
E 5 HOH A 4 1204 5 HOH HOH . 
E 5 HOH A 5 1205 13 HOH HOH . 
E 5 HOH A 6 1206 11 HOH HOH . 
E 5 HOH A 7 1207 24 HOH HOH . 
E 5 HOH A 8 1208 9 HOH HOH . 
E 5 HOH A 9 1209 10 HOH HOH . 
E 5 HOH A 10 1210 22 HOH HOH . 
E 5 HOH A 11 1211 21 HOH HOH . 
E 5 HOH A 12 1212 15 HOH HOH . 
E 5 HOH A 13 1213 20 HOH HOH . 
E 5 HOH A 14 1214 19 HOH HOH . 
E 5 HOH A 15 1215 6 HOH HOH . 
E 5 HOH A 16 1216 17 HOH HOH . 
E 5 HOH A 17 1217 7 HOH HOH . 
F 5 HOH B 1 701 4 HOH HOH . 
F 5 HOH B 2 702 3 HOH HOH . 
F 5 HOH B 3 703 14 HOH HOH . 
F 5 HOH B 4 704 18 HOH HOH . 
F 5 HOH B 5 705 2 HOH HOH . 
F 5 HOH B 6 706 23 HOH HOH . 
F 5 HOH B 7 707 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C12 84X . . . C 3 29.247 46.834 46.228 1 73.9 ? C12 84X 1101 A 1 
HETATM 2 C C15 84X . . . C 3 30.188 46.505 42.44 1 75.42 ? C15 84X 1101 A 1 
HETATM 3 C C16 84X . . . C 3 31.242 47.4 42.193 1 75.97 ? C16 84X 1101 A 1 
HETATM 4 O O01 84X . . . C 3 28.115 46.044 46.303 1 73.28 ? O01 84X 1101 A 1 
HETATM 5 C C02 84X . . . C 3 28.045 45.08 45.333 1 73.91 ? C02 84X 1101 A 1 
HETATM 6 C C05 84X . . . C 3 28.213 45.675 43.909 1 73.75 ? C05 84X 1101 A 1 
HETATM 7 N N08 84X . . . C 3 29.44 46.425 43.776 1 74.27 ? N08 84X 1101 A 1 
HETATM 8 C C09 84X . . . C 3 29.479 47.441 44.832 1 73.37 ? C09 84X 1101 A 1 
HETATM 9 C C17 84X . . . C 3 31.849 47.395 40.986 1 76.92 ? C17 84X 1101 A 1 
HETATM 10 N N18 84X . . . C 3 31.435 46.501 39.982 1 75.78 ? N18 84X 1101 A 1 
HETATM 11 C C19 84X . . . C 3 30.429 45.626 40.211 1 76.35 ? C19 84X 1101 A 1 
HETATM 12 N N20 84X . . . C 3 29.81 45.653 41.452 1 75.51 ? N20 84X 1101 A 1 
HETATM 13 C C21 84X . . . C 3 32.852 48.377 41.007 1 76.75 ? C21 84X 1101 A 1 
HETATM 14 C C23 84X . . . C 3 32.841 48.978 42.255 1 76.2 ? C23 84X 1101 A 1 
HETATM 15 O O25 84X . . . C 3 31.871 48.4 42.986 1 75.08 ? O25 84X 1101 A 1 
HETATM 16 C C26 84X . . . C 3 29.962 44.712 39.212 1 79.4 ? C26 84X 1101 A 1 
HETATM 17 C C27 84X . . . C 3 29.019 43.704 39.536 1 79.66 ? C27 84X 1101 A 1 
HETATM 18 C C29 84X . . . C 3 30.405 44.815 37.896 1 81.15 ? C29 84X 1101 A 1 
HETATM 19 C C31 84X . . . C 3 29.929 43.933 36.898 1 82.61 ? C31 84X 1101 A 1 
HETATM 20 C C32 84X . . . C 3 28.998 42.939 37.251 1 82.08 ? C32 84X 1101 A 1 
HETATM 21 C C34 84X . . . C 3 28.552 42.828 38.549 1 80.94 ? C34 84X 1101 A 1 
HETATM 22 O O35 84X . . . C 3 27.619 41.823 38.881 1 81.59 ? O35 84X 1101 A 1 
HETATM 23 N N37 84X . . . C 3 30.363 43.975 35.455 1 86.11 ? N37 84X 1101 A 1 
HETATM 24 C C39 84X . . . C 3 31.02 45.151 34.75 1 89.5 ? C39 84X 1101 A 1 
HETATM 25 C C42 84X . . . C 3 30.598 46.537 35.33 1 92.12 ? C42 84X 1101 A 1 
HETATM 26 C C43 84X . . . C 3 29.274 46.825 35.598 1 93.11 ? C43 84X 1101 A 1 
HETATM 27 C C45 84X . . . C 3 28.925 48.076 36.13 1 93.72 ? C45 84X 1101 A 1 
HETATM 28 C C47 84X . . . C 3 29.935 49.045 36.39 1 93.87 ? C47 84X 1101 A 1 
HETATM 29 C C49 84X . . . C 3 31.276 48.756 36.12 1 94.11 ? C49 84X 1101 A 1 
HETATM 30 C C51 84X . . . C 3 31.624 47.525 35.598 1 93.11 ? C51 84X 1101 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           30 
#