data_5XIP
#
_model_server_result.job_id            SR1cwjteYQN8p5fK--Wv0g 
_model_server_result.datetime_utc      '2024-10-11 02:20:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5xip 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1003}' 
#
_entry.id    5XIP 
#
_exptl.entry_id    5XIP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              414.681 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5XIP 
_cell.length_a            138.757 
_cell.length_b            138.757 
_cell.length_c            425.671 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5XIP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,Q,R 1 1 
C,D,K,L,M,N,O,P,S,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 J N N 
? 4 M N N 
? 4 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 E O3G ANP . A ANP 1001 1_555 F MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc2 E O1B ANP . A ANP 1001 1_555 F MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? 
metalc ? metalc3 F MG MG . A MG 1002 1_555 Q O HOH . A HOH 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
metalc ? metalc4 F MG MG . A MG 1002 1_555 Q O HOH . A HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc5 F MG MG . A MG 1002 1_555 Q O HOH . A HOH 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? 
metalc ? metalc6 F MG MG . A MG 1002 1_555 Q O HOH . A HOH 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.91 ? 
metalc ? metalc7 H O1G ANP . B ANP 1001 1_555 I MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? 
metalc ? metalc8 H O2G ANP . B ANP 1001 1_555 I MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc9 H O2B ANP . B ANP 1001 1_555 I MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
metalc ? metalc10 I MG MG . B MG 1002 1_555 R O HOH . B HOH 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc11 I MG MG . B MG 1002 1_555 R O HOH . B HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? 
metalc ? metalc12 I MG MG . B MG 1002 1_555 R O HOH . B HOH 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.852 ? 
metalc ? metalc13 I MG MG . B MG 1002 1_555 R O HOH . B HOH 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? 
metalc ? metalc14 K O1G ANP . C ANP 1001 1_555 L MG MG . C MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.835 ? 
metalc ? metalc15 K O1B ANP . C ANP 1001 1_555 L MG MG . C MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? 
metalc ? metalc16 L MG MG . C MG 1002 1_555 S O HOH . C HOH 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.77 ? 
metalc ? metalc17 L MG MG . C MG 1002 1_555 S O HOH . C HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? 
metalc ? metalc18 L MG MG . C MG 1002 1_555 S O HOH . C HOH 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.77 ? 
metalc ? metalc19 L MG MG . C MG 1002 1_555 S O HOH . C HOH 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc20 N O2G ANP . D ANP 1001 1_555 O MG MG . D MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.778 ? 
metalc ? metalc21 N O2B ANP . D ANP 1001 1_555 O MG MG . D MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc22 O MG MG . D MG 1002 1_555 T O HOH . D HOH 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? 
metalc ? metalc23 O MG MG . D MG 1002 1_555 T O HOH . D HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc24 O MG MG . D MG 1002 1_555 T O HOH . D HOH 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? 
metalc ? metalc25 O MG MG . D MG 1002 1_555 T O HOH . D HOH 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? 
#
_chem_comp.formula           'C16 H17 Br Cl N3 O3' 
_chem_comp.formula_weight    414.681 
_chem_comp.id                HFG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Halofuginone 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 C6 HFG sing 179 n n 
C6 C5 HFG doub 180 n y 
C6 C7 HFG sing 181 n y 
BR1 C7 HFG sing 182 n n 
C5 C10 HFG sing 183 n y 
C7 C8 HFG doub 184 n y 
O11 C4 HFG doub 185 n n 
C10 C4 HFG sing 186 n n 
C10 C9 HFG doub 187 n y 
C8 C9 HFG sing 188 n y 
C4 N3 HFG sing 189 n n 
C9 N1 HFG sing 190 n n 
N1' C6' HFG sing 191 n n 
N1' C2' HFG sing 192 n n 
C6' C5' HFG sing 193 n n 
O4' C21 HFG doub 194 n n 
N3 C1' HFG sing 195 n n 
N3 C2 HFG sing 196 n n 
N1 C2 HFG doub 197 n n 
C21 C3' HFG sing 198 n n 
C21 C1' HFG sing 199 n n 
C3' C2' HFG sing 200 n n 
C2' C39 HFG sing 201 n n 
C5' C4' HFG sing 202 n n 
C39 C4' HFG sing 203 n n 
C39 O7' HFG sing 204 n n 
C3' H1 HFG sing 205 n n 
C3' H2 HFG sing 206 n n 
C2' H3 HFG sing 207 n n 
N1' H4 HFG sing 208 n n 
C6' H6 HFG sing 209 n n 
C6' H7 HFG sing 210 n n 
C5' H8 HFG sing 211 n n 
C5' H9 HFG sing 212 n n 
C4' H10 HFG sing 213 n n 
C4' H11 HFG sing 214 n n 
C39 H12 HFG sing 215 n n 
O7' H13 HFG sing 216 n n 
C1' H14 HFG sing 217 n n 
C1' H15 HFG sing 218 n n 
C5 H16 HFG sing 219 n n 
C2 H17 HFG sing 220 n n 
C8 H18 HFG sing 221 n n 
#
_atom_sites.entry_id                     5XIP 
_atom_sites.fract_transf_matrix[1][1]    0.007207 
_atom_sites.fract_transf_matrix[1][2]    0.004161 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008322 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002349 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ANP A 1 1001 1001 ANP ANP . 
F 3 MG A 1 1002 1051 MG MG . 
G 4 HFG A 1 1003 1101 HFG HFG . 
H 2 ANP B 1 1001 1001 ANP ANP . 
I 3 MG B 1 1002 1051 MG MG . 
J 4 HFG B 1 1003 1101 HFG HFG . 
K 2 ANP C 1 1001 1001 ANP ANP . 
L 3 MG C 1 1002 1051 MG MG . 
M 4 HFG C 1 1003 1101 HFG HFG . 
N 2 ANP D 1 1001 1001 ANP ANP . 
O 3 MG D 1 1002 1051 MG MG . 
P 4 HFG D 1 1003 1101 HFG HFG . 
Q 5 HOH A 1 1101 3 HOH HOH . 
Q 5 HOH A 2 1102 1 HOH HOH . 
Q 5 HOH A 3 1103 2 HOH HOH . 
Q 5 HOH A 4 1104 4 HOH HOH . 
R 5 HOH B 1 1101 5 HOH HOH . 
R 5 HOH B 2 1102 7 HOH HOH . 
R 5 HOH B 3 1103 8 HOH HOH . 
R 5 HOH B 4 1104 6 HOH HOH . 
S 5 HOH C 1 1101 10 HOH HOH . 
S 5 HOH C 2 1102 12 HOH HOH . 
S 5 HOH C 3 1103 11 HOH HOH . 
S 5 HOH C 4 1104 9 HOH HOH . 
T 5 HOH D 1 1101 14 HOH HOH . 
T 5 HOH D 2 1102 13 HOH HOH . 
T 5 HOH D 3 1103 16 HOH HOH . 
T 5 HOH D 4 1104 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O4' HFG . . . J 4 -35.989 163.207 4.935 1 29.77 ? O4' HFG 1003 B 1 
HETATM 2 C C21 HFG . . . J 4 -35.871 163.4 3.726 1 31.03 ? C21 HFG 1003 B 1 
HETATM 3 C C3' HFG . . . J 4 -36.887 162.864 2.715 1 30.84 ? C3' HFG 1003 B 1 
HETATM 4 C C2' HFG . . . J 4 -38.116 162.334 3.458 1 31.21 ? C2' HFG 1003 B 1 
HETATM 5 N N1' HFG . . . J 4 -37.723 161.43 4.548 1 32.87 ? N1' HFG 1003 B 1 
HETATM 6 C C6' HFG . . . J 4 -38.895 160.927 5.28 1 31.44 ? C6' HFG 1003 B 1 
HETATM 7 C C5' HFG . . . J 4 -39.705 162.073 5.863 1 30.67 ? C5' HFG 1003 B 1 
HETATM 8 C C4' HFG . . . J 4 -40.15 163.001 4.745 1 30.93 ? C4' HFG 1003 B 1 
HETATM 9 C C39 HFG . . . J 4 -38.931 163.503 3.987 1 31.24 ? C39 HFG 1003 B 1 
HETATM 10 O O7' HFG . . . J 4 -39.355 164.326 2.891 1 30.25 ? O7' HFG 1003 B 1 
HETATM 11 C C1' HFG . . . J 4 -34.699 164.189 3.14 1 32.48 ? C1' HFG 1003 B 1 
HETATM 12 N N3 HFG . . . J 4 -33.587 164.221 4.116 1 35.39 ? N3 HFG 1003 B 1 
HETATM 13 C C4 HFG . . . J 4 -32.745 163.12 4.183 1 37.5 ? C4 HFG 1003 B 1 
HETATM 14 O O11 HFG . . . J 4 -32.897 162.135 3.463 1 37.98 ? O11 HFG 1003 B 1 
HETATM 15 C C10 HFG . . . J 4 -31.67 163.232 5.176 1 39.44 ? C10 HFG 1003 B 1 
HETATM 16 C C5 HFG . . . J 4 -30.763 162.191 5.335 1 43.27 ? C5 HFG 1003 B 1 
HETATM 17 C C2 HFG . . . J 4 -33.394 165.294 4.925 1 34.66 ? C2 HFG 1003 B 1 
HETATM 18 N N1 HFG . . . J 4 -32.46 165.431 5.811 1 37.2 ? N1 HFG 1003 B 1 
HETATM 19 C C9 HFG . . . J 4 -31.558 164.378 5.958 1 40.39 ? C9 HFG 1003 B 1 
HETATM 20 C C8 HFG . . . J 4 -30.537 164.477 6.897 1 45.08 ? C8 HFG 1003 B 1 
HETATM 21 C C7 HFG . . . J 4 -29.629 163.436 7.056 1 48.62 ? C7 HFG 1003 B 1 
HETATM 22 BR BR1 HFG . . . J 4 -28.259 163.589 8.327 1 75.65 ? BR1 HFG 1003 B 1 
HETATM 23 C C6 HFG . . . J 4 -29.744 162.293 6.274 1 48.26 ? C6 HFG 1003 B 1 
HETATM 24 CL CL1 HFG . . . J 4 -28.619 161 6.468 1 61.87 ? CL1 HFG 1003 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           24 
#